RNA–Protein interactions for RNA: ENST00000592927.5

DDX39A-219, Transcript of DExD-box helicase 39A, humanhuman

TSL 3

Gene DDX39A, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-219ENST00000592927 AFMIDQ63HM1 303 aa12.08□□□□□ -0.48
DDX39A-219ENST00000592927 RETSATQ6NUM9 610 aa12.08□□□□□ -0.48
DDX39A-219ENST00000592927 SERPINA13PQ6UXR4 307 aa12.08□□□□□ -0.48
DDX39A-219ENST00000592927 PCGF5Q86SE9 256 aa12.08□□□□□ -0.48
DDX39A-219ENST00000592927 ZC3H18Q86VM9 953 aaKnown RBP12.08□□□□□ -0.48
DDX39A-219ENST00000592927 LRRC49Q8IUZ0 686 aa12.08□□□□□ -0.48
DDX39A-219ENST00000592927 ARHGAP12Q8IWW6 846 aa12.08□□□□□ -0.48
DDX39A-219ENST00000592927 CCDC33Q8N5R6 958 aa12.08□□□□□ -0.48
DDX39A-219ENST00000592927 IL17RCQ8NAC3 791 aa12.08□□□□□ -0.48
DDX39A-219ENST00000592927 TXNDC5Q8NBS9 432 aaKnown RBP12.08□□□□□ -0.48
DDX39A-219ENST00000592927 TFB1MQ8WVM0 346 aaKnown RBP12.08□□□□□ -0.48
DDX39A-219ENST00000592927 IFT81Q8WYA0 676 aa12.08□□□□□ -0.48
DDX39A-219ENST00000592927 RTP4Q96DX8 246 aa12.08□□□□□ -0.48
DDX39A-219ENST00000592927 SNF8Q96H20 258 aa12.08□□□□□ -0.48
DDX39A-219ENST00000592927 QKIQ96PU8 341 aaKnown RBP eCLIP12.08□□□□□ -0.48
DDX39A-219ENST00000592927 TMEM121Q9BTD3 319 aa12.08□□□□□ -0.48
DDX39A-219ENST00000592927 ZDHHC4Q9NPG8 344 aa12.08□□□□□ -0.48
DDX39A-219ENST00000592927 VPS51Q9UID3 782 aa12.08□□□□□ -0.48
DDX39A-219ENST00000592927 HCN2Q9UL51 889 aa12.08□□□□□ -0.48
DDX39A-219ENST00000592927 SDK1Q7Z5N4 2213 aa12.08□□□□□ -0.48
DDX39A-219ENST00000592927 KIAA1549LQ6ZVL6 1849 aa12.08□□□□□ -0.48
DDX39A-219ENST00000592927 NUP205Q92621 2012 aa12.08□□□□□ -0.48
DDX39A-219ENST00000592927 PATE3B3GLJ2 98 aa12.07□□□□□ -0.48
DDX39A-219ENST00000592927 SMAPO00193 183 aa12.07□□□□□ -0.48
DDX39A-219ENST00000592927 MTSS1O43312 755 aa12.07□□□□□ -0.48
DDX39A-219ENST00000592927 RHOBTB1O94844 696 aa12.07□□□□□ -0.48
DDX39A-219ENST00000592927 PLA2G2AP14555 144 aa12.07□□□□□ -0.48
DDX39A-219ENST00000592927 GLDCP23378 1020 aa12.07□□□□□ -0.48
DDX39A-219ENST00000592927 NTSR1P30989 418 aa12.07□□□□□ -0.48
DDX39A-219ENST00000592927 ACTN2P35609 894 aa12.07□□□□□ -0.48
DDX39A-219ENST00000592927 WASP42768 502 aa12.07□□□□□ -0.48
DDX39A-219ENST00000592927 CLCN6P51797 869 aa12.07□□□□□ -0.48
DDX39A-219ENST00000592927 GEMIN4P57678 1058 aaKnown RBP12.07□□□□□ -0.48
DDX39A-219ENST00000592927 SLC20A2Q08357 652 aa12.07□□□□□ -0.48
DDX39A-219ENST00000592927 SLC10A2Q12908 348 aaPredicted RBP12.07□□□□□ -0.48
DDX39A-219ENST00000592927 HLTFQ14527 1009 aaKnown RBP eCLIP12.07□□□□□ -0.48
DDX39A-219ENST00000592927 PTPRNQ16849 979 aa12.07□□□□□ -0.48
DDX39A-219ENST00000592927 P3H1Q32P28 736 aa12.07□□□□□ -0.48
DDX39A-219ENST00000592927 EOGTQ5NDL2 527 aa12.07□□□□□ -0.48
DDX39A-219ENST00000592927 PKN3Q6P5Z2 889 aa12.07□□□□□ -0.48
DDX39A-219ENST00000592927 LINGO4Q6UY18 593 aa12.07□□□□□ -0.48
DDX39A-219ENST00000592927 NAV2Q8IVL1 2488 aa12.07□□□□□ -0.48
DDX39A-219ENST00000592927 ATP11CQ8NB49 1132 aa12.07□□□□□ -0.48
DDX39A-219ENST00000592927 KDM1BQ8NB78 822 aa12.07□□□□□ -0.48
DDX39A-219ENST00000592927 NETO2Q8NC67 525 aa12.07□□□□□ -0.48
DDX39A-219ENST00000592927 AENQ8WTP8 325 aaKnown RBP12.07□□□□□ -0.48
DDX39A-219ENST00000592927 RPL10LQ96L21 214 aaKnown RBP12.07□□□□□ -0.48
DDX39A-219ENST00000592927 ACOX2Q99424 681 aa12.07□□□□□ -0.48
DDX39A-219ENST00000592927 TRIM31Q9BZY9 425 aa12.07□□□□□ -0.48
DDX39A-219ENST00000592927 TSPYL1Q9H0U9 437 aa12.07□□□□□ -0.48
DDX39A-219ENST00000592927 DPH5Q9H2P9 285 aa12.07□□□□□ -0.48
DDX39A-219ENST00000592927 CCDC86Q9H6F5 360 aaKnown RBP12.07□□□□□ -0.48
DDX39A-219ENST00000592927 USP29Q9HBJ7 922 aa12.07□□□□□ -0.48
DDX39A-219ENST00000592927 PAK5Q9P286 719 aa12.07□□□□□ -0.48
DDX39A-219ENST00000592927 NFU1Q9UMS0 254 aa12.07□□□□□ -0.48
DDX39A-219ENST00000592927 SLC8A2Q9UPR5 921 aa12.07□□□□□ -0.48
DDX39A-219ENST00000592927 SNX24Q9Y343 169 aa12.07□□□□□ -0.48
DDX39A-219ENST00000592927 STON1Q9Y6Q2 735 aa12.07□□□□□ -0.48
DDX39A-219ENST00000592927 SHROOM3Q8TF72 1996 aa12.07□□□□□ -0.48
DDX39A-219ENST00000592927 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP12.06□□□□□ -0.48
DDX39A-219ENST00000592927 CXorf51AA0A1B0GTR3 108 aa12.06□□□□□ -0.48
DDX39A-219ENST00000592927 ESYT3A0FGR9 886 aa12.06□□□□□ -0.48
DDX39A-219ENST00000592927 C5orf60A6NFR6 353 aa12.06□□□□□ -0.48
DDX39A-219ENST00000592927 KCNN4O15554 427 aa12.06□□□□□ -0.48
DDX39A-219ENST00000592927 ATP8B1O43520 1251 aa12.06□□□□□ -0.48
DDX39A-219ENST00000592927 SYNCRIPO60506 623 aaKnown RBP12.06□□□□□ -0.48
DDX39A-219ENST00000592927 ZMPSTE24O75844 475 aa12.06□□□□□ -0.48
DDX39A-219ENST00000592927 C1QL1O75973 258 aa12.06□□□□□ -0.48
DDX39A-219ENST00000592927 STK10O94804 968 aaKnown RBP12.06□□□□□ -0.48
DDX39A-219ENST00000592927 SEC31AO94979 1220 aaKnown RBP12.06□□□□□ -0.48
DDX39A-219ENST00000592927 TRIM16O95361 564 aa12.06□□□□□ -0.48
DDX39A-219ENST00000592927 IFNB1P01574 187 aa12.06□□□□□ -0.48
DDX39A-219ENST00000592927 CHRM1P11229 460 aaPredicted RBP12.06□□□□□ -0.48
DDX39A-219ENST00000592927 IVDP26440 423 aa12.06□□□□□ -0.48
DDX39A-219ENST00000592927 RBL1P28749 1068 aa12.06□□□□□ -0.48
DDX39A-219ENST00000592927 ADCY8P40145 1251 aa12.06□□□□□ -0.48
DDX39A-219ENST00000592927 IL12RB1P42701 662 aa12.06□□□□□ -0.48
DDX39A-219ENST00000592927 RPL21P46778 160 aaKnown RBP12.06□□□□□ -0.48
DDX39A-219ENST00000592927 STK19P49842 368 aaPredicted RBP12.06□□□□□ -0.48
DDX39A-219ENST00000592927 VASPP50552 380 aaPredicted RBP12.06□□□□□ -0.48
DDX39A-219ENST00000592927 IRX4P78413 519 aa12.06□□□□□ -0.48
DDX39A-219ENST00000592927 ARF5P84085 180 aa12.06□□□□□ -0.48
DDX39A-219ENST00000592927 GALNT2Q10471 571 aa12.06□□□□□ -0.48
DDX39A-219ENST00000592927 PRKD1Q15139 912 aaPredicted RBP12.06□□□□□ -0.48
DDX39A-219ENST00000592927 ACCSLQ4AC99 568 aa12.06□□□□□ -0.48
DDX39A-219ENST00000592927 BEND6Q5SZJ8 279 aaPredicted RBP12.06□□□□□ -0.48
DDX39A-219ENST00000592927 CEP128Q6ZU80 1094 aa12.06□□□□□ -0.48
DDX39A-219ENST00000592927 TP53INP2Q8IXH6 220 aa12.06□□□□□ -0.48
DDX39A-219ENST00000592927 ATPAF2Q8N5M1 289 aa12.06□□□□□ -0.48
DDX39A-219ENST00000592927 HTR3CQ8WXA8 447 aa12.06□□□□□ -0.48
DDX39A-219ENST00000592927 ART4Q93070 314 aa12.06□□□□□ -0.48
DDX39A-219ENST00000592927 CAVIN3Q969G5 261 aa12.06□□□□□ -0.48
DDX39A-219ENST00000592927 HDAC11Q96DB2 347 aa12.06□□□□□ -0.48
DDX39A-219ENST00000592927 MRGPRX3Q96LB0 322 aa12.06□□□□□ -0.48
DDX39A-219ENST00000592927 GABRG3Q99928 467 aa12.06□□□□□ -0.48
DDX39A-219ENST00000592927 FOXP3Q9BZS1 431 aa12.06□□□□□ -0.48
DDX39A-219ENST00000592927 TMEM245Q9H330 911 aa12.06□□□□□ -0.48
DDX39A-219ENST00000592927 SP110Q9HB58 689 aa12.06□□□□□ -0.48
DDX39A-219ENST00000592927 GRHL1Q9NZI5 618 aa12.06□□□□□ -0.48
DDX39A-219ENST00000592927 MTRF1LQ9UGC7 380 aaKnown RBP12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms