RNA–Protein interactions for RNA: ENST00000588907.2

SCAMP4-211, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 4

Gene SCAMP4, Length 547 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-211ENST00000588907 SUV39H2Q9H5I1 410 aa17.14■□□□□ 0.33
SCAMP4-211ENST00000588907 ETNK1Q9HBU6 452 aa17.14■□□□□ 0.33
SCAMP4-211ENST00000588907 RRAGDQ9NQL2 400 aaPredicted RBP17.14■□□□□ 0.33
SCAMP4-211ENST00000588907 DYRK4Q9NR20 520 aa17.14■□□□□ 0.33
SCAMP4-211ENST00000588907 WHRNQ9P202 907 aa17.14■□□□□ 0.33
SCAMP4-211ENST00000588907 DKK3Q9UBP4 350 aa17.14■□□□□ 0.33
SCAMP4-211ENST00000588907 PPM1HQ9ULR3 514 aa17.14■□□□□ 0.33
SCAMP4-211ENST00000588907 TPX2Q9ULW0 747 aaKnown RBP17.14■□□□□ 0.33
SCAMP4-211ENST00000588907 SHOC2Q9UQ13 582 aa17.14■□□□□ 0.33
SCAMP4-211ENST00000588907 RAI2Q9Y5P3 530 aa17.14■□□□□ 0.33
SCAMP4-211ENST00000588907 MUC3AQ02505 3323 aa17.14■□□□□ 0.33
SCAMP4-211ENST00000588907 A0A1W2PQF6 199 aa17.13■□□□□ 0.33
SCAMP4-211ENST00000588907 DNALI1O14645 258 aaPredicted RBP17.13■□□□□ 0.33
SCAMP4-211ENST00000588907 HTRA2O43464 458 aaPredicted RBP17.13■□□□□ 0.33
SCAMP4-211ENST00000588907 LEFTY1O75610 366 aa17.13■□□□□ 0.33
SCAMP4-211ENST00000588907 SUN1O94901 812 aa17.13■□□□□ 0.33
SCAMP4-211ENST00000588907 HEXIM1O94992 359 aaKnown RBP17.13■□□□□ 0.33
SCAMP4-211ENST00000588907 APRTP07741 180 aa17.13■□□□□ 0.33
SCAMP4-211ENST00000588907 ITIH2P19823 946 aa17.13■□□□□ 0.33
SCAMP4-211ENST00000588907 HLA-DPA1P20036 260 aa17.13■□□□□ 0.33
SCAMP4-211ENST00000588907 C5AR1P21730 350 aa17.13■□□□□ 0.33
SCAMP4-211ENST00000588907 ITGB7P26010 798 aa17.13■□□□□ 0.33
SCAMP4-211ENST00000588907 WASP42768 502 aa17.13■□□□□ 0.33
SCAMP4-211ENST00000588907 CCR3P51677 355 aa17.13■□□□□ 0.33
SCAMP4-211ENST00000588907 MORF4L2Q15014 288 aa17.13■□□□□ 0.33
SCAMP4-211ENST00000588907 TTC31Q49AM3 519 aaPredicted RBP17.13■□□□□ 0.33
SCAMP4-211ENST00000588907 ZNF805Q5CZA5 627 aa17.13■□□□□ 0.33
SCAMP4-211ENST00000588907 CWF19L1Q69YN2 538 aaKnown RBP17.13■□□□□ 0.33
SCAMP4-211ENST00000588907 PPP1R21Q6ZMI0 780 aa17.13■□□□□ 0.33
SCAMP4-211ENST00000588907 PAF1Q8N7H5 531 aa17.13■□□□□ 0.33
SCAMP4-211ENST00000588907 OR6K2Q8NGY2 324 aa17.13■□□□□ 0.33
SCAMP4-211ENST00000588907 GRIN3AQ8TCU5 1115 aa17.13■□□□□ 0.33
SCAMP4-211ENST00000588907 SEC14L1Q92503 715 aa17.13■□□□□ 0.33
SCAMP4-211ENST00000588907 OXNAD1Q96HP4 312 aaPredicted RBP17.13■□□□□ 0.33
SCAMP4-211ENST00000588907 SRPK1Q96SB4 655 aaKnown RBP17.13■□□□□ 0.33
SCAMP4-211ENST00000588907 TRIM51Q9BSJ1 452 aa17.13■□□□□ 0.33
SCAMP4-211ENST00000588907 ZDHHC4Q9NPG8 344 aa17.13■□□□□ 0.33
SCAMP4-211ENST00000588907 WASF2Q9Y6W5 498 aa17.13■□□□□ 0.33
SCAMP4-211ENST00000588907 TSPAN11A1L157 253 aa17.12■□□□□ 0.33
SCAMP4-211ENST00000588907 RIOK3O14730 519 aaKnown RBP17.12■□□□□ 0.33
SCAMP4-211ENST00000588907 PMPCBO75439 489 aa17.12■□□□□ 0.33
SCAMP4-211ENST00000588907 SEC31AO94979 1220 aaKnown RBP17.12■□□□□ 0.33
SCAMP4-211ENST00000588907 PGLSO95336 258 aa17.12■□□□□ 0.33
SCAMP4-211ENST00000588907 PAPSS2O95340 614 aaPredicted RBP17.12■□□□□ 0.33
SCAMP4-211ENST00000588907 MT-CYBP00156 380 aaPredicted RBP17.12■□□□□ 0.33
SCAMP4-211ENST00000588907 IL1BP01584 269 aa17.12■□□□□ 0.33
SCAMP4-211ENST00000588907 UGT2B4P06133 528 aa17.12■□□□□ 0.33
SCAMP4-211ENST00000588907 GRIA4P48058 902 aa17.12■□□□□ 0.33
SCAMP4-211ENST00000588907 WNT3AP56704 352 aa17.12■□□□□ 0.33
SCAMP4-211ENST00000588907 SATB1Q01826 763 aa17.12■□□□□ 0.33
SCAMP4-211ENST00000588907 CDK18Q07002 472 aa17.12■□□□□ 0.33
SCAMP4-211ENST00000588907 KCNJ11Q14654 390 aa17.12■□□□□ 0.33
SCAMP4-211ENST00000588907 CST6Q15828 149 aa17.12■□□□□ 0.33
SCAMP4-211ENST00000588907 ARSIQ5FYB1 569 aa17.12■□□□□ 0.33
SCAMP4-211ENST00000588907 ARMC3Q5W041 872 aa17.12■□□□□ 0.33
SCAMP4-211ENST00000588907 DUPD1Q68J44 220 aa17.12■□□□□ 0.33
SCAMP4-211ENST00000588907 KCTD11Q693B1 232 aa17.12■□□□□ 0.33
SCAMP4-211ENST00000588907 KDELC1Q6UW63 502 aa17.12■□□□□ 0.33
SCAMP4-211ENST00000588907 BMP8AQ7Z5Y6 402 aa17.12■□□□□ 0.33
SCAMP4-211ENST00000588907 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP17.12■□□□□ 0.33
SCAMP4-211ENST00000588907 CAMKK1Q8N5S9 505 aa17.12■□□□□ 0.33
SCAMP4-211ENST00000588907 CHST14Q8NCH0 376 aa17.12■□□□□ 0.33
SCAMP4-211ENST00000588907 MCUQ8NE86 351 aa17.12■□□□□ 0.33
SCAMP4-211ENST00000588907 TSTD1Q8NFU3 115 aa17.12■□□□□ 0.33
SCAMP4-211ENST00000588907 IPMKQ8NFU5 416 aa17.12■□□□□ 0.33
SCAMP4-211ENST00000588907 SPATA22Q8NHS9 363 aa17.12■□□□□ 0.33
SCAMP4-211ENST00000588907 PIP4K2CQ8TBX8 421 aa17.12■□□□□ 0.33
SCAMP4-211ENST00000588907 ECHDC3Q96DC8 303 aa17.12■□□□□ 0.33
SCAMP4-211ENST00000588907 FAM129BQ96TA1 746 aa17.12■□□□□ 0.33
SCAMP4-211ENST00000588907 CD248Q9HCU0 757 aa17.12■□□□□ 0.33
SCAMP4-211ENST00000588907 FAM114A2Q9NRY5 505 aa17.12■□□□□ 0.33
SCAMP4-211ENST00000588907 BDP1A6H8Y1 2624 aa17.11■□□□□ 0.33
SCAMP4-211ENST00000588907 TECTAO75443 2155 aa17.11■□□□□ 0.33
SCAMP4-211ENST00000588907 TNFRSF10AO00220 468 aa17.11■□□□□ 0.33
SCAMP4-211ENST00000588907 KPNA3O00505 521 aaPredicted RBP17.11■□□□□ 0.33
SCAMP4-211ENST00000588907 TRAFD1O14545 582 aaPredicted RBP17.11■□□□□ 0.33
SCAMP4-211ENST00000588907 NDST3O95803 873 aa17.11■□□□□ 0.33
SCAMP4-211ENST00000588907 DNTTP04053 509 aa17.11■□□□□ 0.33
SCAMP4-211ENST00000588907 FGF1P05230 155 aa17.11■□□□□ 0.33
SCAMP4-211ENST00000588907 COPAP53621 1224 aa17.11■□□□□ 0.33
SCAMP4-211ENST00000588907 EPHB1P54762 984 aa17.11■□□□□ 0.33
SCAMP4-211ENST00000588907 CUL1Q13616 776 aa17.11■□□□□ 0.33
SCAMP4-211ENST00000588907 TEX35Q5T0J7 233 aa17.11■□□□□ 0.33
SCAMP4-211ENST00000588907 FAXCQ5TGI0 409 aa17.11■□□□□ 0.33
SCAMP4-211ENST00000588907 IZUMO3Q5VZ72 239 aa17.11■□□□□ 0.33
SCAMP4-211ENST00000588907 PRUNE1Q86TP1 453 aa17.11■□□□□ 0.33
SCAMP4-211ENST00000588907 KBTBD6Q86V97 674 aa17.11■□□□□ 0.33
SCAMP4-211ENST00000588907 TMPRSS6Q8IU80 811 aa17.11■□□□□ 0.33
SCAMP4-211ENST00000588907 CAMK1DQ8IU85 385 aa17.11■□□□□ 0.33
SCAMP4-211ENST00000588907 MMAAQ8IVH4 418 aaKnown RBP17.11■□□□□ 0.33
SCAMP4-211ENST00000588907 IFT20Q8IY31 132 aa17.11■□□□□ 0.33
SCAMP4-211ENST00000588907 PDCD7Q8N8D1 485 aaKnown RBP17.11■□□□□ 0.33
SCAMP4-211ENST00000588907 CPT1BQ92523 772 aa17.11■□□□□ 0.33
SCAMP4-211ENST00000588907 UBXN4Q92575 508 aa17.11■□□□□ 0.33
SCAMP4-211ENST00000588907 PRCCQ92733 491 aaPredicted RBP17.11■□□□□ 0.33
SCAMP4-211ENST00000588907 RAB7BQ96AH8 199 aa17.11■□□□□ 0.33
SCAMP4-211ENST00000588907 MRGPRX2Q96LB1 330 aa17.11■□□□□ 0.33
SCAMP4-211ENST00000588907 TBL1YQ9BQ87 522 aa17.11■□□□□ 0.33
SCAMP4-211ENST00000588907 GORASP1Q9BQQ3 440 aa17.11■□□□□ 0.33
SCAMP4-211ENST00000588907 MLPHQ9BV36 600 aaPredicted RBP17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms