RNA–Protein interactions for RNA: ENST00000584760.1

SREBF1-223, Transcript of sterol regulatory element binding transcription factor 1, human

TSL 2

Gene SREBF1, Length 564 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SREBF1-223	ENST00000584760	CNGA4	Q8IV77	575 aa		13.49	□□□□□ -0.25
SREBF1-223	ENST00000584760	TP53INP2	Q8IXH6	220 aa		13.49	□□□□□ -0.25
SREBF1-223	ENST00000584760	MFSD2A	Q8NA29	543 aa		13.49	□□□□□ -0.25
SREBF1-223	ENST00000584760	FAM71B	Q8TC56	605 aa		13.49	□□□□□ -0.25
SREBF1-223	ENST00000584760	CTNNBL1	Q8WYA6	563 aa	Predicted RBP	13.49	□□□□□ -0.25
SREBF1-223	ENST00000584760	DEF6	Q9H4E7	631 aa		13.49	□□□□□ -0.25
SREBF1-223	ENST00000584760	PCDH18	Q9HCL0	1135 aa		13.49	□□□□□ -0.25
SREBF1-223	ENST00000584760	ZNHIT6	Q9NWK9	470 aa	Known RBP	13.49	□□□□□ -0.25
SREBF1-223	ENST00000584760		A0A1B0GTQ1	180 aa		13.48	□□□□□ -0.25
SREBF1-223	ENST00000584760	C16orf96	A6NNT2	1141 aa		13.48	□□□□□ -0.25
SREBF1-223	ENST00000584760	PRAMEF26	H0Y7S4	382 aa		13.48	□□□□□ -0.25
SREBF1-223	ENST00000584760	TLR4	O00206	839 aa		13.48	□□□□□ -0.25
SREBF1-223	ENST00000584760	KCNK3	O14649	394 aa		13.48	□□□□□ -0.25
SREBF1-223	ENST00000584760	INSIG1	O15503	277 aa		13.48	□□□□□ -0.25
SREBF1-223	ENST00000584760	AKR1B10	O60218	316 aa		13.48	□□□□□ -0.25
SREBF1-223	ENST00000584760	PCDHGA12	O60330	932 aa		13.48	□□□□□ -0.25
SREBF1-223	ENST00000584760	PROSC	O94903	275 aa		13.48	□□□□□ -0.25
SREBF1-223	ENST00000584760	PRB1	P04280	392 aa		13.48	□□□□□ -0.25
SREBF1-223	ENST00000584760	H2AFZ	P0C0S5	128 aa		13.48	□□□□□ -0.25
SREBF1-223	ENST00000584760	TMEM253	P0C7T8	217 aa		13.48	□□□□□ -0.25
SREBF1-223	ENST00000584760	ARL4A	P40617	200 aa		13.48	□□□□□ -0.25
SREBF1-223	ENST00000584760	NXPH1	P58417	271 aa		13.48	□□□□□ -0.25
SREBF1-223	ENST00000584760	SUZ12	Q15022	739 aa	Known RBP	13.48	□□□□□ -0.25
SREBF1-223	ENST00000584760	SLC45A4	Q5BKX6	768 aa		13.48	□□□□□ -0.25
SREBF1-223	ENST00000584760	KIAA1161	Q6NSJ0	714 aa		13.48	□□□□□ -0.25
SREBF1-223	ENST00000584760	FBXL19	Q6PCT2	694 aa		13.48	□□□□□ -0.25
SREBF1-223	ENST00000584760	GDPD4	Q6W3E5	623 aa		13.48	□□□□□ -0.25
SREBF1-223	ENST00000584760	ARHGAP36	Q6ZRI8	547 aa		13.48	□□□□□ -0.25
SREBF1-223	ENST00000584760	H2AFV	Q71UI9	128 aa		13.48	□□□□□ -0.25
SREBF1-223	ENST00000584760	IQCH	Q86VS3	1027 aa		13.48	□□□□□ -0.25
SREBF1-223	ENST00000584760	GALNT15	Q8N3T1	639 aa		13.48	□□□□□ -0.25
SREBF1-223	ENST00000584760	LZTR1	Q8N653	840 aa		13.48	□□□□□ -0.25
SREBF1-223	ENST00000584760	KLK6	Q92876	244 aa		13.48	□□□□□ -0.25
SREBF1-223	ENST00000584760	RAB7B	Q96AH8	199 aa		13.48	□□□□□ -0.25
SREBF1-223	ENST00000584760	SKA1	Q96BD8	255 aa		13.48	□□□□□ -0.25
SREBF1-223	ENST00000584760	KLHL32	Q96NJ5	620 aa		13.48	□□□□□ -0.25
SREBF1-223	ENST00000584760	DCBLD2	Q96PD2	775 aa		13.48	□□□□□ -0.25
SREBF1-223	ENST00000584760	NHEJ1	Q9H9Q4	299 aa	Predicted RBP	13.48	□□□□□ -0.25
SREBF1-223	ENST00000584760	SP110	Q9HB58	689 aa		13.48	□□□□□ -0.25
SREBF1-223	ENST00000584760	FZD3	Q9NPG1	666 aa		13.48	□□□□□ -0.25
SREBF1-223	ENST00000584760	SPTLC3	Q9NUV7	552 aa		13.48	□□□□□ -0.25
SREBF1-223	ENST00000584760	ETNK2	Q9NVF9	386 aa		13.48	□□□□□ -0.25
SREBF1-223	ENST00000584760	CTTNBP2NL	Q9P2B4	639 aa		13.48	□□□□□ -0.25
SREBF1-223	ENST00000584760	GGT7	Q9UJ14	662 aa		13.48	□□□□□ -0.25
SREBF1-223	ENST00000584760	ITM2B	Q9Y287	266 aa		13.48	□□□□□ -0.25
SREBF1-223	ENST00000584760	CA5B	Q9Y2D0	317 aa		13.48	□□□□□ -0.25
SREBF1-223	ENST00000584760	LAMA5	O15230	3695 aa		13.48	□□□□□ -0.25
SREBF1-223	ENST00000584760	PTPRB	P23467	1997 aa		13.47	□□□□□ -0.25
SREBF1-223	ENST00000584760	ARID1B	Q8NFD5	2236 aa	Predicted RBP	13.47	□□□□□ -0.25
SREBF1-223	ENST00000584760		A0A087WV48	116 aa		13.47	□□□□□ -0.25
SREBF1-223	ENST00000584760	DFFA	O00273	331 aa		13.47	□□□□□ -0.25
SREBF1-223	ENST00000584760	AREL1	O15033	823 aa		13.47	□□□□□ -0.25
SREBF1-223	ENST00000584760	SLC31A1	O15431	190 aa		13.47	□□□□□ -0.25
SREBF1-223	ENST00000584760	DFNA5	O60443	496 aa		13.47	□□□□□ -0.25
SREBF1-223	ENST00000584760	DKK1	O94907	266 aa		13.47	□□□□□ -0.25
SREBF1-223	ENST00000584760	PCDH8	O95206	1070 aa		13.47	□□□□□ -0.25
SREBF1-223	ENST00000584760	CD48	P09326	243 aa		13.47	□□□□□ -0.25
SREBF1-223	ENST00000584760	HNRNPA2B1	P22626	353 aa	Known RBP	13.47	□□□□□ -0.25
SREBF1-223	ENST00000584760	AMPD1	P23109	780 aa		13.47	□□□□□ -0.25
SREBF1-223	ENST00000584760	IL4R	P24394	825 aa		13.47	□□□□□ -0.25
SREBF1-223	ENST00000584760	MAN1A1	P33908	653 aa		13.47	□□□□□ -0.25
SREBF1-223	ENST00000584760	RGR	P47804	291 aa		13.47	□□□□□ -0.25
SREBF1-223	ENST00000584760	ARSE	P51690	589 aa		13.47	□□□□□ -0.25
SREBF1-223	ENST00000584760	RPS21	P63220	83 aa	Known RBP	13.47	□□□□□ -0.25
SREBF1-223	ENST00000584760	IL9R	Q01113	521 aa		13.47	□□□□□ -0.25
SREBF1-223	ENST00000584760	RAD51	Q06609	339 aa		13.47	□□□□□ -0.25
SREBF1-223	ENST00000584760	IL10RB	Q08334	325 aa		13.47	□□□□□ -0.25
SREBF1-223	ENST00000584760	OVGP1	Q12889	678 aa		13.47	□□□□□ -0.25
SREBF1-223	ENST00000584760	CAMK2B	Q13554	666 aa		13.47	□□□□□ -0.25
SREBF1-223	ENST00000584760	FGL2	Q14314	439 aa		13.47	□□□□□ -0.25
SREBF1-223	ENST00000584760	SHB	Q15464	509 aa		13.47	□□□□□ -0.25
SREBF1-223	ENST00000584760	TSR1	Q2NL82	804 aa	Known RBP	13.47	□□□□□ -0.25
SREBF1-223	ENST00000584760	TMCO3	Q6UWJ1	677 aa		13.47	□□□□□ -0.25
SREBF1-223	ENST00000584760	SPATS2	Q86XZ4	545 aa	Known RBP	13.47	□□□□□ -0.25
SREBF1-223	ENST00000584760	PDCD7	Q8N8D1	485 aa	Known RBP	13.47	□□□□□ -0.25
SREBF1-223	ENST00000584760	ELF4	Q99607	663 aa	Predicted RBP	13.47	□□□□□ -0.25
SREBF1-223	ENST00000584760	MYOC	Q99972	504 aa		13.47	□□□□□ -0.25
SREBF1-223	ENST00000584760	CPEB1	Q9BZB8	566 aa	Known RBP	13.47	□□□□□ -0.25
SREBF1-223	ENST00000584760	TRIM5	Q9C035	493 aa		13.47	□□□□□ -0.25
SREBF1-223	ENST00000584760	GDF3	Q9NR23	364 aa		13.47	□□□□□ -0.25
SREBF1-223	ENST00000584760	RCOR3	Q9P2K3	495 aa	Predicted RBP	13.47	□□□□□ -0.25
SREBF1-223	ENST00000584760	DKK3	Q9UBP4	350 aa		13.47	□□□□□ -0.25
SREBF1-223	ENST00000584760	IPO11	Q9UI26	975 aa	Known RBP	13.47	□□□□□ -0.25
SREBF1-223	ENST00000584760	TDRD6	O60522	2096 aa	Known RBP	13.47	□□□□□ -0.25
SREBF1-223	ENST00000584760	TSPAN11	A1L157	253 aa		13.46	□□□□□ -0.25
SREBF1-223	ENST00000584760	AKR1B15	C9JRZ8	316 aa	Predicted RBP	13.46	□□□□□ -0.25
SREBF1-223	ENST00000584760	MUSK	O15146	869 aa		13.46	□□□□□ -0.25
SREBF1-223	ENST00000584760	TNFSF14	O43557	240 aa		13.46	□□□□□ -0.25
SREBF1-223	ENST00000584760	TSPAN6	O43657	245 aa		13.46	□□□□□ -0.25
SREBF1-223	ENST00000584760	PALM	O75781	387 aa		13.46	□□□□□ -0.25
SREBF1-223	ENST00000584760	PIGN	O95427	931 aa		13.46	□□□□□ -0.25
SREBF1-223	ENST00000584760	PEX11B	O96011	259 aa		13.46	□□□□□ -0.25
SREBF1-223	ENST00000584760	CDH6	P55285	790 aa		13.46	□□□□□ -0.25
SREBF1-223	ENST00000584760	TAS2R40	P59535	323 aa		13.46	□□□□□ -0.25
SREBF1-223	ENST00000584760	C19orf57	Q0VDD7	668 aa		13.46	□□□□□ -0.25
SREBF1-223	ENST00000584760	MMRN1	Q13201	1228 aa		13.46	□□□□□ -0.25
SREBF1-223	ENST00000584760	DPYSL3	Q14195	570 aa		13.46	□□□□□ -0.25
SREBF1-223	ENST00000584760	KRT81	Q14533	505 aa		13.46	□□□□□ -0.25
SREBF1-223	ENST00000584760	RFTN1	Q14699	578 aa	Predicted RBP	13.46	□□□□□ -0.25
SREBF1-223	ENST00000584760	STAT4	Q14765	748 aa		13.46	□□□□□ -0.25

Retrieved 100 of 20,778 RNA–protein pairs in 22 ms