RNA–Protein interactions for RNA: ENST00000582486.5

GGA3-213, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 5 BASIC

Gene GGA3, Length 2,319 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-213ENST00000582486 INSIG1O15503 277 aa11.3□□□□□ -0.6
GGA3-213ENST00000582486 SNX3O60493 162 aa11.3□□□□□ -0.6
GGA3-213ENST00000582486 TMCC1O94876 653 aa11.3□□□□□ -0.6
GGA3-213ENST00000582486 PRKCGP05129 697 aa11.3□□□□□ -0.6
GGA3-213ENST00000582486 ALADP13716 330 aa11.3□□□□□ -0.6
GGA3-213ENST00000582486 TYK2P29597 1187 aa11.3□□□□□ -0.6
GGA3-213ENST00000582486 AVPR1AP37288 418 aa11.3□□□□□ -0.6
GGA3-213ENST00000582486 CTBP1Q13363 440 aa11.3□□□□□ -0.6
GGA3-213ENST00000582486 PPM1JQ5JR12 505 aa11.3□□□□□ -0.6
GGA3-213ENST00000582486 TSTD2Q5T7W7 516 aa11.3□□□□□ -0.6
GGA3-213ENST00000582486 CMC1Q7Z7K0 106 aa11.3□□□□□ -0.6
GGA3-213ENST00000582486 RBM23Q86U06 439 aaKnown RBP11.3□□□□□ -0.6
GGA3-213ENST00000582486 DENND6AQ8IWF6 608 aa11.3□□□□□ -0.6
GGA3-213ENST00000582486 CPXM2Q8N436 756 aa11.3□□□□□ -0.6
GGA3-213ENST00000582486 SH3RF2Q8TEC5 729 aa11.3□□□□□ -0.6
GGA3-213ENST00000582486 ALG14Q96F25 216 aa11.3□□□□□ -0.6
GGA3-213ENST00000582486 FEM1CQ96JP0 617 aa11.3□□□□□ -0.6
GGA3-213ENST00000582486 RANBP9Q96S59 729 aa11.3□□□□□ -0.6
GGA3-213ENST00000582486 MCMBPQ9BTE3 642 aa11.3□□□□□ -0.6
GGA3-213ENST00000582486 HTATIP2Q9BUP3 242 aa11.3□□□□□ -0.6
GGA3-213ENST00000582486 SCUBE2Q9NQ36 999 aa11.3□□□□□ -0.6
GGA3-213ENST00000582486 ARHGAP26Q9UNA1 814 aa11.3□□□□□ -0.6
GGA3-213ENST00000582486 MTO1Q9Y2Z2 717 aaKnown RBP11.3□□□□□ -0.6
GGA3-213ENST00000582486 EPOP01588 193 aa11.3□□□□□ -0.6
GGA3-213ENST00000582486 AHSGP02765 367 aa11.3□□□□□ -0.6
GGA3-213ENST00000582486 PFKLP17858 780 aa11.3□□□□□ -0.6
GGA3-213ENST00000582486 PAMP19021 973 aa11.3□□□□□ -0.6
GGA3-213ENST00000582486 HLA-DPA1P20036 260 aa11.3□□□□□ -0.6
GGA3-213ENST00000582486 GABRB3P28472 473 aa11.3□□□□□ -0.6
GGA3-213ENST00000582486 GMPRP36959 345 aa11.3□□□□□ -0.6
GGA3-213ENST00000582486 CSE1LP55060 971 aaKnown RBP11.3□□□□□ -0.6
GGA3-213ENST00000582486 NTHL1P78549 312 aa11.3□□□□□ -0.6
GGA3-213ENST00000582486 MPPE1Q53F39 396 aa11.3□□□□□ -0.6
GGA3-213ENST00000582486 KIAA0930Q6ICG6 404 aaPredicted RBP11.3□□□□□ -0.6
GGA3-213ENST00000582486 CGB2Q6NT52 195 aa11.3□□□□□ -0.6
GGA3-213ENST00000582486 RTL10Q7L3V2 364 aa11.3□□□□□ -0.6
GGA3-213ENST00000582486 CNTN4Q8IWV2 1026 aa11.3□□□□□ -0.6
GGA3-213ENST00000582486 APCDD1Q8J025 514 aa11.3□□□□□ -0.6
GGA3-213ENST00000582486 ARMC2Q8NEN0 867 aa11.3□□□□□ -0.6
GGA3-213ENST00000582486 ACVR1CQ8NER5 493 aa11.3□□□□□ -0.6
GGA3-213ENST00000582486 RIN3Q8TB24 985 aa11.3□□□□□ -0.6
GGA3-213ENST00000582486 ACMSDQ8TDX5 336 aa11.3□□□□□ -0.6
GGA3-213ENST00000582486 PTPRN2Q92932 1015 aa11.3□□□□□ -0.6
GGA3-213ENST00000582486 VPS39Q96JC1 886 aa11.3□□□□□ -0.6
GGA3-213ENST00000582486 CABS1Q96KC9 395 aa11.3□□□□□ -0.6
GGA3-213ENST00000582486 TRIB3Q96RU7 358 aa11.3□□□□□ -0.6
GGA3-213ENST00000582486 CAB39LQ9H9S4 337 aa11.3□□□□□ -0.6
GGA3-213ENST00000582486 SNX15Q9NRS6 342 aa11.3□□□□□ -0.6
GGA3-213ENST00000582486 VPS51Q9UID3 782 aa11.3□□□□□ -0.6
GGA3-213ENST00000582486 CHKBQ9Y259 395 aa11.3□□□□□ -0.6
GGA3-213ENST00000582486 CEP290O15078 2479 aa11.29□□□□□ -0.6
GGA3-213ENST00000582486 E2F8A0AVK6 867 aa11.29□□□□□ -0.6
GGA3-213ENST00000582486 MROH6A6NGR9 719 aa11.29□□□□□ -0.6
GGA3-213ENST00000582486 TIMM44O43615 452 aa11.29□□□□□ -0.6
GGA3-213ENST00000582486 MT-CO1P00395 513 aa11.29□□□□□ -0.6
GGA3-213ENST00000582486 FGF1P05230 155 aa11.29□□□□□ -0.6
GGA3-213ENST00000582486 PIRTP0C851 137 aa11.29□□□□□ -0.6
GGA3-213ENST00000582486 SERPINB4P48594 390 aa11.29□□□□□ -0.6
GGA3-213ENST00000582486 CORO7P57737 925 aa11.29□□□□□ -0.6
GGA3-213ENST00000582486 MPP1Q00013 466 aa11.29□□□□□ -0.6
GGA3-213ENST00000582486 IFT88Q13099 833 aa11.29□□□□□ -0.6
GGA3-213ENST00000582486 THOC5Q13769 683 aaKnown RBP11.29□□□□□ -0.6
GGA3-213ENST00000582486 CCDC197Q8NCU1 140 aa11.29□□□□□ -0.6
GGA3-213ENST00000582486 OR13J1Q8NGT2 312 aa11.29□□□□□ -0.6
GGA3-213ENST00000582486 BLOC1S5Q8TDH9 187 aa11.29□□□□□ -0.6
GGA3-213ENST00000582486 TASP1Q9H6P5 420 aa11.29□□□□□ -0.6
GGA3-213ENST00000582486 MANSC1Q9H8J5 431 aa11.29□□□□□ -0.6
GGA3-213ENST00000582486 CERS4Q9HA82 394 aa11.29□□□□□ -0.6
GGA3-213ENST00000582486 NSMCE4AQ9NXX6 385 aa11.29□□□□□ -0.6
GGA3-213ENST00000582486 GGT7Q9UJ14 662 aa11.29□□□□□ -0.6
GGA3-213ENST00000582486 PHTF1Q9UMS5 762 aa11.29□□□□□ -0.6
GGA3-213ENST00000582486 FCF1Q9Y324 198 aaKnown RBP11.29□□□□□ -0.6
GGA3-213ENST00000582486 KCTD3Q9Y597 815 aa11.29□□□□□ -0.6
GGA3-213ENST00000582486 CCL22O00626 93 aa11.29□□□□□ -0.6
GGA3-213ENST00000582486 LDB2O43679 373 aa11.29□□□□□ -0.6
GGA3-213ENST00000582486 PAPSS2O95340 614 aaPredicted RBP11.29□□□□□ -0.6
GGA3-213ENST00000582486 NDST3O95803 873 aa11.29□□□□□ -0.6
GGA3-213ENST00000582486 DDX6P26196 483 aaKnown RBP eCLIP11.29□□□□□ -0.6
GGA3-213ENST00000582486 HOXA9P31269 272 aa11.29□□□□□ -0.6
GGA3-213ENST00000582486 IRX4P78413 519 aa11.29□□□□□ -0.6
GGA3-213ENST00000582486 GPM6BQ13491 265 aa11.29□□□□□ -0.6
GGA3-213ENST00000582486 GRM3Q14832 879 aa11.29□□□□□ -0.6
GGA3-213ENST00000582486 SHHQ15465 462 aa11.29□□□□□ -0.6
GGA3-213ENST00000582486 DLG2Q15700 870 aa11.29□□□□□ -0.6
GGA3-213ENST00000582486 INO80DQ53TQ3 878 aaPredicted RBP11.29□□□□□ -0.6
GGA3-213ENST00000582486 MPP7Q5T2T1 576 aa11.29□□□□□ -0.6
GGA3-213ENST00000582486 C16orf46Q6P387 395 aa11.29□□□□□ -0.6
GGA3-213ENST00000582486 C6orf89Q6UWU4 347 aa11.29□□□□□ -0.6
GGA3-213ENST00000582486 GRASPQ7Z6J2 395 aaPredicted RBP11.29□□□□□ -0.6
GGA3-213ENST00000582486 ZC3HC1Q86WB0 502 aaKnown RBP11.29□□□□□ -0.6
GGA3-213ENST00000582486 USP13Q92995 863 aaPredicted RBP11.29□□□□□ -0.6
GGA3-213ENST00000582486 ISL2Q96A47 359 aa11.29□□□□□ -0.6
GGA3-213ENST00000582486 NUDCD1Q96RS6 583 aa11.29□□□□□ -0.6
GGA3-213ENST00000582486 MECRQ9BV79 373 aa11.29□□□□□ -0.6
GGA3-213ENST00000582486 PCDHGC4Q9Y5F7 938 aa11.29□□□□□ -0.6
GGA3-213ENST00000582486 HCFC2Q9Y5Z7 792 aa11.29□□□□□ -0.6
GGA3-213ENST00000582486 ARL5AQ9Y689 179 aa11.29□□□□□ -0.6
GGA3-213ENST00000582486 NOTCH4Q99466 2003 aa11.28□□□□□ -0.6
GGA3-213ENST00000582486 CCDC195A0A1B0GUA6 201 aa11.28□□□□□ -0.6
GGA3-213ENST00000582486 K7ERQ8 282 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms