RNA–Protein interactions for RNA: ENST00000582230.5

TOP3A-213, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 4

Gene TOP3A, Length 588 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-213ENST00000582230 USP29Q9HBJ7 922 aa20.26■□□□□ 0.83
TOP3A-213ENST00000582230 GLOD4Q9HC38 313 aa20.26■□□□□ 0.83
TOP3A-213ENST00000582230 KLHL8Q9P2G9 620 aaPredicted RBP20.26■□□□□ 0.83
TOP3A-213ENST00000582230 MBD1Q9UIS9 605 aaPredicted RBP20.26■□□□□ 0.83
TOP3A-213ENST00000582230 SAR1BQ9Y6B6 198 aa20.26■□□□□ 0.83
TOP3A-213ENST00000582230 TSPAN11A1L157 253 aa20.25■□□□□ 0.83
TOP3A-213ENST00000582230 TTC24A2A3L6 582 aaPredicted RBP20.25■□□□□ 0.83
TOP3A-213ENST00000582230 GJB3O75712 270 aa20.25■□□□□ 0.83
TOP3A-213ENST00000582230 SERPINF2P08697 491 aa20.25■□□□□ 0.83
TOP3A-213ENST00000582230 CA4P22748 312 aa20.25■□□□□ 0.83
TOP3A-213ENST00000582230 CASQ1P31415 396 aa20.25■□□□□ 0.83
TOP3A-213ENST00000582230 SUOXP51687 545 aa20.25■□□□□ 0.83
TOP3A-213ENST00000582230 POLR2LP62875 67 aaKnown RBP20.25■□□□□ 0.83
TOP3A-213ENST00000582230 DSC2Q02487 901 aa20.25■□□□□ 0.83
TOP3A-213ENST00000582230 PIP5KL1Q5T9C9 394 aa20.25■□□□□ 0.83
TOP3A-213ENST00000582230 AGBL4Q5VU57 503 aa20.25■□□□□ 0.83
TOP3A-213ENST00000582230 NYAP1Q6ZVC0 841 aa20.25■□□□□ 0.83
TOP3A-213ENST00000582230 TTC7BQ86TV6 843 aa20.25■□□□□ 0.83
TOP3A-213ENST00000582230 ZNF567Q8N184 647 aa20.25■□□□□ 0.83
TOP3A-213ENST00000582230 CADM4Q8NFZ8 388 aa20.25■□□□□ 0.83
TOP3A-213ENST00000582230 ATG4AQ8WYN0 398 aa20.25■□□□□ 0.83
TOP3A-213ENST00000582230 SPOCK2Q92563 424 aa20.25■□□□□ 0.83
TOP3A-213ENST00000582230 MS4A14Q96JA4 679 aa20.25■□□□□ 0.83
TOP3A-213ENST00000582230 ZC3H10Q96K80 434 aaKnown RBP20.25■□□□□ 0.83
TOP3A-213ENST00000582230 C10orf88Q9H8K7 445 aa20.25■□□□□ 0.83
TOP3A-213ENST00000582230 C5orf60A6NFR6 353 aa20.24■□□□□ 0.83
TOP3A-213ENST00000582230 LRRC72A6NJI9 287 aa20.24■□□□□ 0.83
TOP3A-213ENST00000582230 PLK4O00444 970 aa20.24■□□□□ 0.83
TOP3A-213ENST00000582230 TRAFD1O14545 582 aaPredicted RBP20.24■□□□□ 0.83
TOP3A-213ENST00000582230 HTRA2O43464 458 aaPredicted RBP20.24■□□□□ 0.83
TOP3A-213ENST00000582230 PLRG1O43660 514 aaKnown RBP20.24■□□□□ 0.83
TOP3A-213ENST00000582230 RHOBTB1O94844 696 aa20.24■□□□□ 0.83
TOP3A-213ENST00000582230 SEMA4FO95754 770 aa20.24■□□□□ 0.83
TOP3A-213ENST00000582230 TUBB4AP04350 444 aa20.24■□□□□ 0.83
TOP3A-213ENST00000582230 ADRB3P13945 408 aa20.24■□□□□ 0.83
TOP3A-213ENST00000582230 ACSL1P33121 698 aa20.24■□□□□ 0.83
TOP3A-213ENST00000582230 NBL1P41271 181 aa20.24■□□□□ 0.83
TOP3A-213ENST00000582230 ADPRHP54922 357 aa20.24■□□□□ 0.83
TOP3A-213ENST00000582230 RPL6Q02878 288 aaKnown RBP20.24■□□□□ 0.83
TOP3A-213ENST00000582230 NIPAL4Q0D2K0 466 aa20.24■□□□□ 0.83
TOP3A-213ENST00000582230 OASLQ15646 514 aaKnown RBP20.24■□□□□ 0.83
TOP3A-213ENST00000582230 ELF2Q15723 593 aa20.24■□□□□ 0.83
TOP3A-213ENST00000582230 SLC14A2Q15849 920 aa20.24■□□□□ 0.83
TOP3A-213ENST00000582230 ITPRIPL1Q6GPH6 555 aa20.24■□□□□ 0.83
TOP3A-213ENST00000582230 PARS2Q7L3T8 475 aaKnown RBP20.24■□□□□ 0.83
TOP3A-213ENST00000582230 LPCAT2Q7L5N7 544 aa20.24■□□□□ 0.83
TOP3A-213ENST00000582230 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP20.24■□□□□ 0.83
TOP3A-213ENST00000582230 PAF1Q8N7H5 531 aa20.24■□□□□ 0.83
TOP3A-213ENST00000582230 OR2T34Q8NGX1 318 aa20.24■□□□□ 0.83
TOP3A-213ENST00000582230 OR14C36Q8NHC7 312 aa20.24■□□□□ 0.83
TOP3A-213ENST00000582230 ECHDC3Q96DC8 303 aa20.24■□□□□ 0.83
TOP3A-213ENST00000582230 IMP4Q96G21 291 aaKnown RBP20.24■□□□□ 0.83
TOP3A-213ENST00000582230 NSMCE3Q96MG7 304 aa20.24■□□□□ 0.83
TOP3A-213ENST00000582230 TMEM121Q9BTD3 319 aa20.24■□□□□ 0.83
TOP3A-213ENST00000582230 EPC1Q9H2F5 836 aa20.24■□□□□ 0.83
TOP3A-213ENST00000582230 ZNF148Q9UQR1 794 aa20.24■□□□□ 0.83
TOP3A-213ENST00000582230 DRG1Q9Y295 367 aaKnown RBP20.24■□□□□ 0.83
TOP3A-213ENST00000582230 PCDHGC4Q9Y5F7 938 aa20.24■□□□□ 0.83
TOP3A-213ENST00000582230 ZNF185O15231 689 aa20.23■□□□□ 0.83
TOP3A-213ENST00000582230 AP1G1O43747 822 aa20.23■□□□□ 0.83
TOP3A-213ENST00000582230 OPHN1O60890 802 aa20.23■□□□□ 0.83
TOP3A-213ENST00000582230 ITGAVP06756 1048 aa20.23■□□□□ 0.83
TOP3A-213ENST00000582230 BCKDHBP21953 392 aa20.23■□□□□ 0.83
TOP3A-213ENST00000582230 XPAP23025 273 aaPredicted RBP20.23■□□□□ 0.83
TOP3A-213ENST00000582230 SNX1Q13596 522 aa20.23■□□□□ 0.83
TOP3A-213ENST00000582230 ANKRD20A2Q5SQ80 823 aa20.23■□□□□ 0.83
TOP3A-213ENST00000582230 ANKRD20A1Q5TYW2 823 aa20.23■□□□□ 0.83
TOP3A-213ENST00000582230 ANKRD20A3Q5VUR7 823 aa20.23■□□□□ 0.83
TOP3A-213ENST00000582230 SYT10Q6XYQ8 523 aa20.23■□□□□ 0.83
TOP3A-213ENST00000582230 FAM71DQ8N9W8 422 aa20.23■□□□□ 0.83
TOP3A-213ENST00000582230 FOXJ1Q92949 421 aa20.23■□□□□ 0.83
TOP3A-213ENST00000582230 SPATA13Q96N96 652 aa20.23■□□□□ 0.83
TOP3A-213ENST00000582230 FCRL5Q96RD9 977 aa20.23■□□□□ 0.83
TOP3A-213ENST00000582230 GPR174Q9BXC1 333 aa20.23■□□□□ 0.83
TOP3A-213ENST00000582230 DUSP15Q9H1R2 295 aaPredicted RBP20.23■□□□□ 0.83
TOP3A-213ENST00000582230 RNF14Q9UBS8 474 aa20.23■□□□□ 0.83
TOP3A-213ENST00000582230 RAB23Q9ULC3 237 aa20.23■□□□□ 0.83
TOP3A-213ENST00000582230 TPX2Q9ULW0 747 aaKnown RBP20.23■□□□□ 0.83
TOP3A-213ENST00000582230 RAI2Q9Y5P3 530 aa20.23■□□□□ 0.83
TOP3A-213ENST00000582230 GCATO75600 419 aa20.22■□□□□ 0.83
TOP3A-213ENST00000582230 MMP2P08253 660 aa20.22■□□□□ 0.83
TOP3A-213ENST00000582230 TIMP2P16035 220 aa20.22■□□□□ 0.83
TOP3A-213ENST00000582230 CD68P34810 354 aaPredicted RBP20.22■□□□□ 0.83
TOP3A-213ENST00000582230 CD86P42081 329 aa20.22■□□□□ 0.83
TOP3A-213ENST00000582230 SKOR1P84550 965 aa20.22■□□□□ 0.83
TOP3A-213ENST00000582230 UGP2Q16851 508 aa20.22■□□□□ 0.83
TOP3A-213ENST00000582230 PLK5Q496M5 336 aa20.22■□□□□ 0.83
TOP3A-213ENST00000582230 ARMC12Q5T9G4 340 aa20.22■□□□□ 0.83
TOP3A-213ENST00000582230 PMS2CLQ68D20 193 aa20.22■□□□□ 0.83
TOP3A-213ENST00000582230 NEK5Q6P3R8 708 aa20.22■□□□□ 0.83
TOP3A-213ENST00000582230 PRR23BQ6ZRT6 265 aa20.22■□□□□ 0.83
TOP3A-213ENST00000582230 PRELID2Q8N945 189 aa20.22■□□□□ 0.83
TOP3A-213ENST00000582230 TADA1Q96BN2 335 aa20.22■□□□□ 0.83
TOP3A-213ENST00000582230 RTP4Q96DX8 246 aa20.22■□□□□ 0.83
TOP3A-213ENST00000582230 C16orf45Q96MC5 204 aaPredicted RBP20.22■□□□□ 0.83
TOP3A-213ENST00000582230 PPP1R2P1Q96PQ5 205 aa20.22■□□□□ 0.83
TOP3A-213ENST00000582230 GBA3Q9H227 469 aa20.22■□□□□ 0.83
TOP3A-213ENST00000582230 PREBQ9HCU5 417 aa20.22■□□□□ 0.83
TOP3A-213ENST00000582230 RSPH14Q9UHP6 348 aa20.22■□□□□ 0.83
TOP3A-213ENST00000582230 PCDHB9Q9Y5E1 797 aa20.22■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms