RNA–Protein interactions for RNA: ENST00000581226.1

SMCHD1-204, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 3

Gene SMCHD1, Length 459 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-204ENST00000581226 TCP11L2Q8N4U5 519 aa4.76□□□□□ -1.65
SMCHD1-204ENST00000581226 RRP36Q96EU6 259 aaKnown RBP4.76□□□□□ -1.65
SMCHD1-204ENST00000581226 SEC62Q99442 399 aaKnown RBP4.76□□□□□ -1.65
SMCHD1-204ENST00000581226 LBHD1Q9BQE6 289 aaPredicted RBP4.76□□□□□ -1.65
SMCHD1-204ENST00000581226 NTPCRQ9BSD7 190 aaKnown RBP4.76□□□□□ -1.65
SMCHD1-204ENST00000581226 HEMGNQ9BXL5 484 aa4.76□□□□□ -1.65
SMCHD1-204ENST00000581226 NUF2Q9BZD4 464 aa4.76□□□□□ -1.65
SMCHD1-204ENST00000581226 PAIP1Q9H074 479 aaKnown RBP4.76□□□□□ -1.65
SMCHD1-204ENST00000581226 UBN1Q9NPG3 1134 aa4.76□□□□□ -1.65
SMCHD1-204ENST00000581226 ANKRD10Q9NXR5 420 aa4.76□□□□□ -1.65
SMCHD1-204ENST00000581226 CTNNAL1Q9UBT7 734 aa4.76□□□□□ -1.65
SMCHD1-204ENST00000581226 NDRG3Q9UGV2 375 aa4.76□□□□□ -1.65
SMCHD1-204ENST00000581226 KLRF2D3W0D1 207 aa4.75□□□□□ -1.65
SMCHD1-204ENST00000581226 TACC1O75410 805 aa4.75□□□□□ -1.65
SMCHD1-204ENST00000581226 HOXC6P09630 235 aa4.75□□□□□ -1.65
SMCHD1-204ENST00000581226 PCNAP12004 261 aa4.75□□□□□ -1.65
SMCHD1-204ENST00000581226 SRD5A1P18405 259 aa4.75□□□□□ -1.65
SMCHD1-204ENST00000581226 MYF6P23409 242 aa4.75□□□□□ -1.65
SMCHD1-204ENST00000581226 POU1F1P28069 291 aa4.75□□□□□ -1.65
SMCHD1-204ENST00000581226 ABCD3P28288 659 aa4.75□□□□□ -1.65
SMCHD1-204ENST00000581226 PCYT1AP49585 367 aa4.75□□□□□ -1.65
SMCHD1-204ENST00000581226 CXCR3P49682 368 aa4.75□□□□□ -1.65
SMCHD1-204ENST00000581226 NUDT6P53370 316 aa4.75□□□□□ -1.65
SMCHD1-204ENST00000581226 HDAC4P56524 1084 aa4.75□□□□□ -1.65
SMCHD1-204ENST00000581226 Q0VFX4 171 aa4.75□□□□□ -1.65
SMCHD1-204ENST00000581226 MYBPC2Q14324 1141 aa4.75□□□□□ -1.65
SMCHD1-204ENST00000581226 ARHGEF6Q15052 776 aa4.75□□□□□ -1.65
SMCHD1-204ENST00000581226 PRAMEF19Q5SWL8 479 aa4.75□□□□□ -1.65
SMCHD1-204ENST00000581226 ARHGAP30Q7Z6I6 1101 aaPredicted RBP4.75□□□□□ -1.65
SMCHD1-204ENST00000581226 MB21D2Q8IYB1 491 aaPredicted RBP4.75□□□□□ -1.65
SMCHD1-204ENST00000581226 C9orf106Q8NAJ2 232 aa4.75□□□□□ -1.65
SMCHD1-204ENST00000581226 B4GALNT2Q8NHY0 566 aa4.75□□□□□ -1.65
SMCHD1-204ENST00000581226 ZC3HAV1LQ96H79 300 aaKnown RBP4.75□□□□□ -1.65
SMCHD1-204ENST00000581226 DDX52Q9Y2R4 599 aaKnown RBP eCLIP4.75□□□□□ -1.65
SMCHD1-204ENST00000581226 HSPB2A8KAH6 182 aa4.74□□□□□ -1.65
SMCHD1-204ENST00000581226 EDN2P20800 178 aa4.74□□□□□ -1.65
SMCHD1-204ENST00000581226 THBS3P49746 956 aa4.74□□□□□ -1.65
SMCHD1-204ENST00000581226 NR1H2P55055 460 aa4.74□□□□□ -1.65
SMCHD1-204ENST00000581226 CLDN2P57739 230 aa4.74□□□□□ -1.65
SMCHD1-204ENST00000581226 CRYZQ08257 329 aaKnown RBP4.74□□□□□ -1.65
SMCHD1-204ENST00000581226 DSC1Q08554 894 aa4.74□□□□□ -1.65
SMCHD1-204ENST00000581226 G3BP1Q13283 466 aaKnown RBP eCLIP4.74□□□□□ -1.65
SMCHD1-204ENST00000581226 HSPB2Q16082 182 aa4.74□□□□□ -1.65
SMCHD1-204ENST00000581226 INTS11Q5TA45 600 aaKnown RBP4.74□□□□□ -1.65
SMCHD1-204ENST00000581226 TSPYL6Q8N831 410 aa4.74□□□□□ -1.65
SMCHD1-204ENST00000581226 NAXEQ8NCW5 288 aa4.74□□□□□ -1.65
SMCHD1-204ENST00000581226 GJC3Q8NFK1 279 aa4.74□□□□□ -1.65
SMCHD1-204ENST00000581226 MIB2Q96AX9 1013 aa4.74□□□□□ -1.65
SMCHD1-204ENST00000581226 OTULINQ96BN8 352 aa4.74□□□□□ -1.65
SMCHD1-204ENST00000581226 LYZL4Q96KX0 146 aa4.74□□□□□ -1.65
SMCHD1-204ENST00000581226 ZPBPQ9BS86 351 aa4.74□□□□□ -1.65
SMCHD1-204ENST00000581226 TMEM204Q9BSN7 226 aa4.74□□□□□ -1.65
SMCHD1-204ENST00000581226 AGXT2Q9BYV1 514 aa4.74□□□□□ -1.65
SMCHD1-204ENST00000581226 JMJD4Q9H9V9 463 aa4.74□□□□□ -1.65
SMCHD1-204ENST00000581226 PREBQ9HCU5 417 aa4.74□□□□□ -1.65
SMCHD1-204ENST00000581226 C20orf141Q9NUB4 165 aa4.74□□□□□ -1.65
SMCHD1-204ENST00000581226 TMEM51Q9NW97 253 aa4.74□□□□□ -1.65
SMCHD1-204ENST00000581226 KCND2Q9NZV8 630 aa4.74□□□□□ -1.65
SMCHD1-204ENST00000581226 CARD8Q9Y2G2 431 aa4.74□□□□□ -1.65
SMCHD1-204ENST00000581226 A0A1B0GVM2 712 aa4.73□□□□□ -1.65
SMCHD1-204ENST00000581226 SMAD6O43541 496 aaKnown RBP4.73□□□□□ -1.65
SMCHD1-204ENST00000581226 RGS11O94810 467 aa4.73□□□□□ -1.65
SMCHD1-204ENST00000581226 SOX30O94993 753 aa4.73□□□□□ -1.65
SMCHD1-204ENST00000581226 F9P00740 461 aa4.73□□□□□ -1.65
SMCHD1-204ENST00000581226 HEXAP06865 529 aa4.73□□□□□ -1.65
SMCHD1-204ENST00000581226 ATP1A3P13637 1013 aa4.73□□□□□ -1.65
SMCHD1-204ENST00000581226 NANOS2P60321 138 aaKnown RBP4.73□□□□□ -1.65
SMCHD1-204ENST00000581226 ADORA2A-AS1P86434 159 aa4.73□□□□□ -1.65
SMCHD1-204ENST00000581226 ST3GAL1Q11201 340 aa4.73□□□□□ -1.65
SMCHD1-204ENST00000581226 ITGADQ13349 1161 aa4.73□□□□□ -1.65
SMCHD1-204ENST00000581226 CTTNQ14247 550 aaKnown RBP4.73□□□□□ -1.65
SMCHD1-204ENST00000581226 PRICKLE4Q2TBC4 344 aa4.73□□□□□ -1.65
SMCHD1-204ENST00000581226 SLC4A8Q2Y0W8 1093 aa4.73□□□□□ -1.65
SMCHD1-204ENST00000581226 SLC9B1Q4ZJI4 515 aa4.73□□□□□ -1.65
SMCHD1-204ENST00000581226 ESCO2Q56NI9 601 aa4.73□□□□□ -1.65
SMCHD1-204ENST00000581226 JAKMIP3Q5VZ66 844 aa4.73□□□□□ -1.65
SMCHD1-204ENST00000581226 ACAD10Q6JQN1 1059 aa4.73□□□□□ -1.65
SMCHD1-204ENST00000581226 CCDC70Q6NSX1 233 aa4.73□□□□□ -1.65
SMCHD1-204ENST00000581226 CPLX2Q6PUV4 134 aaKnown RBP4.73□□□□□ -1.65
SMCHD1-204ENST00000581226 ZNF517Q6ZMY9 492 aaPredicted RBP4.73□□□□□ -1.65
SMCHD1-204ENST00000581226 ARMC8Q8IUR7 673 aa4.73□□□□□ -1.65
SMCHD1-204ENST00000581226 PARP16Q8N5Y8 322 aa4.73□□□□□ -1.65
SMCHD1-204ENST00000581226 OR14A16Q8NHC5 309 aa4.73□□□□□ -1.65
SMCHD1-204ENST00000581226 ADAMTS14Q8WXS8 1223 aa4.73□□□□□ -1.65
SMCHD1-204ENST00000581226 ZUFSPQ96AP4 578 aa4.73□□□□□ -1.65
SMCHD1-204ENST00000581226 KLHL15Q96M94 604 aa4.73□□□□□ -1.65
SMCHD1-204ENST00000581226 SIN3AQ96ST3 1273 aa4.73□□□□□ -1.65
SMCHD1-204ENST00000581226 SLC25A18Q9H1K4 315 aa4.73□□□□□ -1.65
SMCHD1-204ENST00000581226 CLK4Q9HAZ1 481 aaKnown RBP4.73□□□□□ -1.65
SMCHD1-204ENST00000581226 CYSLTR2Q9NS75 346 aa4.73□□□□□ -1.65
SMCHD1-204ENST00000581226 MPP6Q9NZW5 540 aa4.73□□□□□ -1.65
SMCHD1-204ENST00000581226 HSPB7Q9UBY9 170 aa4.73□□□□□ -1.65
SMCHD1-204ENST00000581226 CAMK2AQ9UQM7 478 aa4.73□□□□□ -1.65
SMCHD1-204ENST00000581226 MTA2O94776 668 aa4.72□□□□□ -1.65
SMCHD1-204ENST00000581226 ACAA1P09110 424 aaPredicted RBP4.72□□□□□ -1.65
SMCHD1-204ENST00000581226 IRF1P10914 325 aa4.72□□□□□ -1.65
SMCHD1-204ENST00000581226 AMTP48728 403 aa4.72□□□□□ -1.65
SMCHD1-204ENST00000581226 EFNA5P52803 228 aa4.72□□□□□ -1.65
SMCHD1-204ENST00000581226 NEXNQ0ZGT2 675 aa4.72□□□□□ -1.65
SMCHD1-204ENST00000581226 PTP4A2Q12974 167 aa4.72□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms