RNA–Protein interactions for RNA: ENST00000580798.1

SMG8-205, Transcript of SMG8, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG8, Length 583 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG8-205ENST00000580798 PDPK2PQ6A1A2 396 aa4.15□□□□□ -1.75
SMG8-205ENST00000580798 PM20D1Q6GTS8 502 aa4.15□□□□□ -1.75
SMG8-205ENST00000580798 KIF6Q6ZMV9 814 aa4.15□□□□□ -1.75
SMG8-205ENST00000580798 TAF8Q7Z7C8 310 aa4.15□□□□□ -1.75
SMG8-205ENST00000580798 TMEM200AQ86VY9 491 aa4.15□□□□□ -1.75
SMG8-205ENST00000580798 ARL14Q8N4G2 192 aa4.15□□□□□ -1.75
SMG8-205ENST00000580798 SRBD1Q8N5C6 995 aaKnown RBP4.15□□□□□ -1.75
SMG8-205ENST00000580798 CCDC63Q8NA47 563 aa4.15□□□□□ -1.75
SMG8-205ENST00000580798 SPATA20Q8TB22 786 aa4.15□□□□□ -1.75
SMG8-205ENST00000580798 DDI1Q8WTU0 396 aa4.15□□□□□ -1.75
SMG8-205ENST00000580798 DNAAF4Q8WXU2 420 aa4.15□□□□□ -1.75
SMG8-205ENST00000580798 BRI3BPQ8WY22 251 aa4.15□□□□□ -1.75
SMG8-205ENST00000580798 TBC1D5Q92609 795 aa4.15□□□□□ -1.75
SMG8-205ENST00000580798 PTP4A1Q93096 173 aa4.15□□□□□ -1.75
SMG8-205ENST00000580798 SGK3Q96BR1 496 aa4.15□□□□□ -1.75
SMG8-205ENST00000580798 C1GALT1C1Q96EU7 318 aa4.15□□□□□ -1.75
SMG8-205ENST00000580798 TTC25Q96NG3 672 aa4.15□□□□□ -1.75
SMG8-205ENST00000580798 RAB3IPQ96QF0 476 aaPredicted RBP4.15□□□□□ -1.75
SMG8-205ENST00000580798 FAM118BQ9BPY3 351 aa4.15□□□□□ -1.75
SMG8-205ENST00000580798 THUMPD3Q9BV44 507 aaKnown RBP4.15□□□□□ -1.75
SMG8-205ENST00000580798 B3GNT5Q9BYG0 378 aa4.15□□□□□ -1.75
SMG8-205ENST00000580798 AGXT2Q9BYV1 514 aa4.15□□□□□ -1.75
SMG8-205ENST00000580798 AMBRA1Q9C0C7 1298 aa4.15□□□□□ -1.75
SMG8-205ENST00000580798 BTBD1Q9H0C5 482 aa4.15□□□□□ -1.75
SMG8-205ENST00000580798 XRN2Q9H0D6 950 aaKnown RBP eCLIP4.15□□□□□ -1.75
SMG8-205ENST00000580798 ABCG8Q9H221 673 aa4.15□□□□□ -1.75
SMG8-205ENST00000580798 CENPHQ9H3R5 247 aa4.15□□□□□ -1.75
SMG8-205ENST00000580798 PNPLA8Q9NP80 782 aa4.15□□□□□ -1.75
SMG8-205ENST00000580798 GPR108Q9NPR9 543 aa4.15□□□□□ -1.75
SMG8-205ENST00000580798 RPRD1BQ9NQG5 326 aaKnown RBP4.15□□□□□ -1.75
SMG8-205ENST00000580798 HPS4Q9NQG7 708 aa4.15□□□□□ -1.75
SMG8-205ENST00000580798 SERTAD4Q9NUC0 356 aa4.15□□□□□ -1.75
SMG8-205ENST00000580798 TAB2Q9NYJ8 693 aa4.15□□□□□ -1.75
SMG8-205ENST00000580798 EHD3Q9NZN3 535 aa4.15□□□□□ -1.75
SMG8-205ENST00000580798 CFAP97Q9P2B7 532 aa4.15□□□□□ -1.75
SMG8-205ENST00000580798 MORF4L1Q9UBU8 362 aa4.15□□□□□ -1.75
SMG8-205ENST00000580798 AMACRQ9UHK6 382 aa4.15□□□□□ -1.75
SMG8-205ENST00000580798 CPSF3Q9UKF6 684 aaKnown RBP4.15□□□□□ -1.75
SMG8-205ENST00000580798 L1RE1Q9UN81 338 aa4.15□□□□□ -1.75
SMG8-205ENST00000580798 AGAP1Q9UPQ3 857 aa4.15□□□□□ -1.75
SMG8-205ENST00000580798 CBY1Q9Y3M2 126 aa4.15□□□□□ -1.75
SMG8-205ENST00000580798 GMEB1Q9Y692 573 aa4.15□□□□□ -1.75
SMG8-205ENST00000580798 CFAP20Q9Y6A4 193 aaKnown RBP4.15□□□□□ -1.75
SMG8-205ENST00000580798 WDR19Q8NEZ3 1342 aa4.15□□□□□ -1.75
SMG8-205ENST00000580798 MYO3BQ8WXR4 1341 aa4.15□□□□□ -1.75
SMG8-205ENST00000580798 NSD2O96028 1365 aa4.14□□□□□ -1.75
SMG8-205ENST00000580798 POM121BA6NF01 834 aa4.14□□□□□ -1.75
SMG8-205ENST00000580798 PRSS29PA6NIE9 313 aa4.14□□□□□ -1.75
SMG8-205ENST00000580798 TARM1B6A8C7 271 aa4.14□□□□□ -1.75
SMG8-205ENST00000580798 H0YAE9 185 aa4.14□□□□□ -1.75
SMG8-205ENST00000580798 ACKR2O00590 384 aa4.14□□□□□ -1.75
SMG8-205ENST00000580798 ZSCAN9O15535 394 aaPredicted RBP4.14□□□□□ -1.75
SMG8-205ENST00000580798 SLC25A17O43808 307 aa4.14□□□□□ -1.75
SMG8-205ENST00000580798 GMFGO60234 142 aa4.14□□□□□ -1.75
SMG8-205ENST00000580798 VPS4BO75351 444 aa4.14□□□□□ -1.75
SMG8-205ENST00000580798 PTP4A3O75365 173 aa4.14□□□□□ -1.75
SMG8-205ENST00000580798 BEST1O76090 585 aa4.14□□□□□ -1.75
SMG8-205ENST00000580798 REC8O95072 547 aa4.14□□□□□ -1.75
SMG8-205ENST00000580798 GGPS1O95749 300 aa4.14□□□□□ -1.75
SMG8-205ENST00000580798 ECDO95905 644 aaPredicted RBP4.14□□□□□ -1.75
SMG8-205ENST00000580798 CHEK2O96017 543 aa4.14□□□□□ -1.75
SMG8-205ENST00000580798 DLDP09622 509 aaKnown RBP4.14□□□□□ -1.75
SMG8-205ENST00000580798 CSH1P0DML2 217 aa4.14□□□□□ -1.75
SMG8-205ENST00000580798 CSH2P0DML3 217 aa4.14□□□□□ -1.75
SMG8-205ENST00000580798 XRCC6P12956 609 aaKnown RBP eCLIP4.14□□□□□ -1.75
SMG8-205ENST00000580798 JUPP14923 745 aa4.14□□□□□ -1.75
SMG8-205ENST00000580798 VEGFAP15692 232 aaPredicted RBP4.14□□□□□ -1.75
SMG8-205ENST00000580798 PRLRP16471 622 aa4.14□□□□□ -1.75
SMG8-205ENST00000580798 PRKACBP22694 351 aa4.14□□□□□ -1.75
SMG8-205ENST00000580798 CD6P30203 668 aa4.14□□□□□ -1.75
SMG8-205ENST00000580798 HNF1BP35680 557 aa4.14□□□□□ -1.75
SMG8-205ENST00000580798 TCF7P36402 384 aaPredicted RBP4.14□□□□□ -1.75
SMG8-205ENST00000580798 CCT6AP40227 531 aaKnown RBP4.14□□□□□ -1.75
SMG8-205ENST00000580798 LMAN1P49257 510 aa4.14□□□□□ -1.75
SMG8-205ENST00000580798 CCR9P51686 369 aa4.14□□□□□ -1.75
SMG8-205ENST00000580798 RPS6KA3P51812 740 aa4.14□□□□□ -1.75
SMG8-205ENST00000580798 GBX2P52951 348 aaPredicted RBP4.14□□□□□ -1.75
SMG8-205ENST00000580798 ITGA8P53708 1063 aa4.14□□□□□ -1.75
SMG8-205ENST00000580798 RAD23AP54725 363 aa4.14□□□□□ -1.75
SMG8-205ENST00000580798 CSNK2BP67870 215 aa4.14□□□□□ -1.75
SMG8-205ENST00000580798 KCNJ10P78508 379 aa4.14□□□□□ -1.75
SMG8-205ENST00000580798 DSC2Q02487 901 aa4.14□□□□□ -1.75
SMG8-205ENST00000580798 CREB5Q02930 508 aa4.14□□□□□ -1.75
SMG8-205ENST00000580798 PPIDQ08752 370 aaKnown RBP4.14□□□□□ -1.75
SMG8-205ENST00000580798 FOXO1Q12778 655 aa4.14□□□□□ -1.75
SMG8-205ENST00000580798 STK4Q13043 487 aa4.14□□□□□ -1.75
SMG8-205ENST00000580798 RPA4Q13156 261 aa4.14□□□□□ -1.75
SMG8-205ENST00000580798 MTX1Q13505 466 aa4.14□□□□□ -1.75
SMG8-205ENST00000580798 COTL1Q14019 142 aa4.14□□□□□ -1.75
SMG8-205ENST00000580798 GIT2Q14161 759 aa4.14□□□□□ -1.75
SMG8-205ENST00000580798 PTK2BQ14289 1009 aa4.14□□□□□ -1.75
SMG8-205ENST00000580798 HABP2Q14520 560 aaPredicted RBP4.14□□□□□ -1.75
SMG8-205ENST00000580798 EFTUD2Q15029 972 aaKnown RBP eCLIP4.14□□□□□ -1.75
SMG8-205ENST00000580798 DLGAP5Q15398 846 aa4.14□□□□□ -1.75
SMG8-205ENST00000580798 SNCBQ16143 134 aa4.14□□□□□ -1.75
SMG8-205ENST00000580798 DPYSL2Q16555 572 aa4.14□□□□□ -1.75
SMG8-205ENST00000580798 PFKFB4Q16877 469 aa4.14□□□□□ -1.75
SMG8-205ENST00000580798 CTXN3Q4LDR2 81 aa4.14□□□□□ -1.75
SMG8-205ENST00000580798 XKR3Q5GH77 459 aa4.14□□□□□ -1.75
SMG8-205ENST00000580798 PLAC9Q5JTB6 97 aa4.14□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms