RNA–Protein interactions for RNA: ENST00000576708.5

NUP88-212, Transcript of nucleoporin 88, humanhuman

TSL 5

Gene NUP88, Length 800 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-212ENST00000576708 CLDN6P56747 220 aa6.41□□□□□ -1.38
NUP88-212ENST00000576708 ST8SIA6P61647 398 aa6.41□□□□□ -1.38
NUP88-212ENST00000576708 CETN1Q12798 172 aa6.41□□□□□ -1.38
NUP88-212ENST00000576708 PAK1Q13153 545 aa6.41□□□□□ -1.38
NUP88-212ENST00000576708 CDH18Q13634 790 aa6.41□□□□□ -1.38
NUP88-212ENST00000576708 AUHQ13825 339 aaKnown RBP6.41□□□□□ -1.38
NUP88-212ENST00000576708 HNRNPDQ14103 355 aaKnown RBP6.41□□□□□ -1.38
NUP88-212ENST00000576708 BECN1Q14457 450 aa6.41□□□□□ -1.38
NUP88-212ENST00000576708 KCNJ12Q14500 433 aa6.41□□□□□ -1.38
NUP88-212ENST00000576708 E2F5Q15329 346 aa6.41□□□□□ -1.38
NUP88-212ENST00000576708 CST6Q15828 149 aa6.41□□□□□ -1.38
NUP88-212ENST00000576708 CAMK4Q16566 473 aa6.41□□□□□ -1.38
NUP88-212ENST00000576708 HNRNPA1L2Q32P51 320 aaKnown RBP6.41□□□□□ -1.38
NUP88-212ENST00000576708 KIAA0895LQ68EN5 471 aa6.41□□□□□ -1.38
NUP88-212ENST00000576708 NCEH1Q6PIU2 408 aa6.41□□□□□ -1.38
NUP88-212ENST00000576708 VHLLQ6RSH7 139 aa6.41□□□□□ -1.38
NUP88-212ENST00000576708 CCNI2Q6ZMN8 369 aaPredicted RBP6.41□□□□□ -1.38
NUP88-212ENST00000576708 DBX2Q6ZNG2 339 aa6.41□□□□□ -1.38
NUP88-212ENST00000576708 TMEM110Q86TL2 294 aa6.41□□□□□ -1.38
NUP88-212ENST00000576708 CHSY1Q86X52 802 aa6.41□□□□□ -1.38
NUP88-212ENST00000576708 DTX1Q86Y01 620 aa6.41□□□□□ -1.38
NUP88-212ENST00000576708 GATAD2AQ86YP4 633 aa6.41□□□□□ -1.38
NUP88-212ENST00000576708 ELOA2Q8IYF1 753 aaPredicted RBP6.41□□□□□ -1.38
NUP88-212ENST00000576708 DEFB106AQ8N104 65 aa6.41□□□□□ -1.38
NUP88-212ENST00000576708 STK40Q8N2I9 435 aa6.41□□□□□ -1.38
NUP88-212ENST00000576708 AADATQ8N5Z0 425 aa6.41□□□□□ -1.38
NUP88-212ENST00000576708 OR52K2Q8NGK3 314 aa6.41□□□□□ -1.38
NUP88-212ENST00000576708 MDM1Q8TC05 714 aa6.41□□□□□ -1.38
NUP88-212ENST00000576708 PIWIL2Q8TC59 973 aaKnown RBP6.41□□□□□ -1.38
NUP88-212ENST00000576708 KLHL6Q8WZ60 621 aa6.41□□□□□ -1.38
NUP88-212ENST00000576708 IGSF8Q969P0 613 aa6.41□□□□□ -1.38
NUP88-212ENST00000576708 SERPINB11Q96P15 392 aa6.41□□□□□ -1.38
NUP88-212ENST00000576708 DDX50Q9BQ39 737 aaKnown RBP6.41□□□□□ -1.38
NUP88-212ENST00000576708 PRDM14Q9GZV8 571 aa6.41□□□□□ -1.38
NUP88-212ENST00000576708 PCED1AQ9H1Q7 454 aa6.41□□□□□ -1.38
NUP88-212ENST00000576708 CAAP1Q9H8G2 361 aa6.41□□□□□ -1.38
NUP88-212ENST00000576708 SGK2Q9HBY8 427 aa6.41□□□□□ -1.38
NUP88-212ENST00000576708 ATP13A1Q9HD20 1204 aa6.41□□□□□ -1.38
NUP88-212ENST00000576708 PLCB1Q9NQ66 1216 aa6.41□□□□□ -1.38
NUP88-212ENST00000576708 SEMA3GQ9NS98 782 aa6.41□□□□□ -1.38
NUP88-212ENST00000576708 APOBEC2Q9Y235 224 aaKnown RBP6.41□□□□□ -1.38
NUP88-212ENST00000576708 NCKAP1Q9Y2A7 1128 aa6.41□□□□□ -1.38
NUP88-212ENST00000576708 NFE2L3Q9Y4A8 694 aa6.41□□□□□ -1.38
NUP88-212ENST00000576708 CEP83Q9Y592 693 aa6.41□□□□□ -1.38
NUP88-212ENST00000576708 SNX10Q9Y5X0 201 aa6.41□□□□□ -1.38
NUP88-212ENST00000576708 SPEGQ15772 3267 aa6.41□□□□□ -1.38
NUP88-212ENST00000576708 PCNX2A6NKB5 2137 aa6.41□□□□□ -1.38
NUP88-212ENST00000576708 ASPMQ8IZT6 3477 aa6.41□□□□□ -1.38
NUP88-212ENST00000576708 KIAA1324LA8MWY0 1029 aaPredicted RBP6.4□□□□□ -1.38
NUP88-212ENST00000576708 KCNU1A8MYU2 1149 aa6.4□□□□□ -1.38
NUP88-212ENST00000576708 GNA14O95837 355 aa6.4□□□□□ -1.38
NUP88-212ENST00000576708 APOEP02649 317 aa6.4□□□□□ -1.38
NUP88-212ENST00000576708 ASLP04424 464 aa6.4□□□□□ -1.38
NUP88-212ENST00000576708 ERBB2P04626 1255 aa6.4□□□□□ -1.38
NUP88-212ENST00000576708 SRPRAP08240 638 aaKnown RBP6.4□□□□□ -1.38
NUP88-212ENST00000576708 ZNF883P0CG24 379 aa6.4□□□□□ -1.38
NUP88-212ENST00000576708 PDGFRAP16234 1089 aa6.4□□□□□ -1.38
NUP88-212ENST00000576708 PPP1R2P41236 205 aa6.4□□□□□ -1.38
NUP88-212ENST00000576708 ACADSBP45954 432 aa6.4□□□□□ -1.38
NUP88-212ENST00000576708 CLCN7P51798 805 aa6.4□□□□□ -1.38
NUP88-212ENST00000576708 YWHAZP63104 245 aaKnown RBP6.4□□□□□ -1.38
NUP88-212ENST00000576708 ECT2LQ008S8 904 aa6.4□□□□□ -1.38
NUP88-212ENST00000576708 SLC7A5Q01650 507 aa6.4□□□□□ -1.38
NUP88-212ENST00000576708 ZBTB16Q05516 673 aa6.4□□□□□ -1.38
NUP88-212ENST00000576708 PDCLQ13371 301 aa6.4□□□□□ -1.38
NUP88-212ENST00000576708 EIF4EBP2Q13542 120 aaPredicted RBP6.4□□□□□ -1.38
NUP88-212ENST00000576708 LRP8Q14114 963 aa6.4□□□□□ -1.38
NUP88-212ENST00000576708 SHBQ15464 509 aa6.4□□□□□ -1.38
NUP88-212ENST00000576708 POM121L1PQ3SYA9 428 aa6.4□□□□□ -1.38
NUP88-212ENST00000576708 TTC31Q49AM3 519 aaPredicted RBP6.4□□□□□ -1.38
NUP88-212ENST00000576708 HSP90AA4PQ58FG1 418 aa6.4□□□□□ -1.38
NUP88-212ENST00000576708 CXorf57Q6NSI4 855 aaKnown RBP6.4□□□□□ -1.38
NUP88-212ENST00000576708 FBXL22Q6P050 247 aa6.4□□□□□ -1.38
NUP88-212ENST00000576708 TRIM65Q6PJ69 517 aa6.4□□□□□ -1.38
NUP88-212ENST00000576708 IL27RAQ6UWB1 636 aa6.4□□□□□ -1.38
NUP88-212ENST00000576708 C6orf15Q6UXA7 325 aaPredicted RBP6.4□□□□□ -1.38
NUP88-212ENST00000576708 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP6.4□□□□□ -1.38
NUP88-212ENST00000576708 FAM183BPQ6ZVS7 135 aa6.4□□□□□ -1.38
NUP88-212ENST00000576708 ADAT2Q7Z6V5 191 aaKnown RBP6.4□□□□□ -1.38
NUP88-212ENST00000576708 C14orf80Q86SX3 495 aa6.4□□□□□ -1.38
NUP88-212ENST00000576708 GLRX5Q86SX6 157 aa6.4□□□□□ -1.38
NUP88-212ENST00000576708 PROSER1Q86XN7 944 aa6.4□□□□□ -1.38
NUP88-212ENST00000576708 IRF2BP1Q8IU81 584 aa6.4□□□□□ -1.38
NUP88-212ENST00000576708 CCAR2Q8N163 923 aaKnown RBP6.4□□□□□ -1.38
NUP88-212ENST00000576708 CELF2-AS1Q8N7Q2 184 aa6.4□□□□□ -1.38
NUP88-212ENST00000576708 C1orf131Q8NDD1 294 aaKnown RBP6.4□□□□□ -1.38
NUP88-212ENST00000576708 PTPRN2Q92932 1015 aa6.4□□□□□ -1.38
NUP88-212ENST00000576708 CPXM1Q96SM3 734 aa6.4□□□□□ -1.38
NUP88-212ENST00000576708 PRMT1Q99873 361 aaKnown RBP6.4□□□□□ -1.38
NUP88-212ENST00000576708 OMDQ99983 421 aa6.4□□□□□ -1.38
NUP88-212ENST00000576708 KRTAP9-9Q9BYP9 154 aa6.4□□□□□ -1.38
NUP88-212ENST00000576708 KRTAP9-4Q9BYQ2 154 aa6.4□□□□□ -1.38
NUP88-212ENST00000576708 THAP9Q9H5L6 903 aa6.4□□□□□ -1.38
NUP88-212ENST00000576708 FAM204AQ9H8W3 233 aa6.4□□□□□ -1.38
NUP88-212ENST00000576708 POPDC2Q9HBU9 364 aa6.4□□□□□ -1.38
NUP88-212ENST00000576708 SIX2Q9NPC8 291 aa6.4□□□□□ -1.38
NUP88-212ENST00000576708 ANLNQ9NQW6 1124 aa6.4□□□□□ -1.38
NUP88-212ENST00000576708 AASDHPPTQ9NRN7 309 aa6.4□□□□□ -1.38
NUP88-212ENST00000576708 DDIT4Q9NX09 232 aa6.4□□□□□ -1.38
NUP88-212ENST00000576708 PCDHGB2Q9Y5G2 931 aa6.4□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms