RNA–Protein interactions for RNA: ENST00000574897.5

NPLOC4-217, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 2

Gene NPLOC4, Length 2,365 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-217ENST00000574897 ZYG11AQ6WRX3 759 aa23.87■■□□□ 1.41
NPLOC4-217ENST00000574897 MCUR1Q96AQ8 359 aa23.87■■□□□ 1.41
NPLOC4-217ENST00000574897 PRKD2Q9BZL6 878 aa23.87■■□□□ 1.41
NPLOC4-217ENST00000574897 COG4Q9H9E3 785 aa23.87■■□□□ 1.41
NPLOC4-217ENST00000574897 MTRRQ9UBK8 725 aa23.87■■□□□ 1.41
NPLOC4-217ENST00000574897 TAGLN3Q9UI15 199 aa23.87■■□□□ 1.41
NPLOC4-217ENST00000574897 MTF2Q9Y483 593 aaPredicted RBP23.87■■□□□ 1.41
NPLOC4-217ENST00000574897 ZFP37Q9Y6Q3 630 aaPredicted RBP23.87■■□□□ 1.41
NPLOC4-217ENST00000574897 VGLL3A8MV65 326 aa23.86■■□□□ 1.41
NPLOC4-217ENST00000574897 PIRTP0C851 137 aa23.86■■□□□ 1.41
NPLOC4-217ENST00000574897 ALOX15P16050 662 aaPredicted RBP23.86■■□□□ 1.41
NPLOC4-217ENST00000574897 GLDCP23378 1020 aa23.86■■□□□ 1.41
NPLOC4-217ENST00000574897 ALDH7A1P49419 539 aaKnown RBP23.86■■□□□ 1.41
NPLOC4-217ENST00000574897 SGSHP51688 502 aa23.86■■□□□ 1.41
NPLOC4-217ENST00000574897 SLC9B1Q4ZJI4 515 aa23.86■■□□□ 1.41
NPLOC4-217ENST00000574897 SLC8B1Q6J4K2 584 aa23.86■■□□□ 1.41
NPLOC4-217ENST00000574897 POU5F2Q8N7G0 328 aa23.86■■□□□ 1.41
NPLOC4-217ENST00000574897 KCNV2Q8TDN2 545 aa23.86■■□□□ 1.41
NPLOC4-217ENST00000574897 TADA1Q96BN2 335 aa23.86■■□□□ 1.41
NPLOC4-217ENST00000574897 SGF29Q96ES7 293 aa23.86■■□□□ 1.41
NPLOC4-217ENST00000574897 PPP1R36Q96LQ0 422 aa23.86■■□□□ 1.41
NPLOC4-217ENST00000574897 OLFM1Q99784 485 aa23.86■■□□□ 1.41
NPLOC4-217ENST00000574897 NACA2Q9H009 215 aa23.86■■□□□ 1.41
NPLOC4-217ENST00000574897 GKN1Q9NS71 199 aa23.86■■□□□ 1.41
NPLOC4-217ENST00000574897 SEC23IPQ9Y6Y8 1000 aaKnown RBP23.86■■□□□ 1.41
NPLOC4-217ENST00000574897 TARM1B6A8C7 271 aa23.86■■□□□ 1.41
NPLOC4-217ENST00000574897 PRAMEF11O60813 436 aa23.86■■□□□ 1.41
NPLOC4-217ENST00000574897 ATP5C1P36542 298 aaKnown RBP23.86■■□□□ 1.41
NPLOC4-217ENST00000574897 GRIA4P48058 902 aa23.86■■□□□ 1.41
NPLOC4-217ENST00000574897 SMARCB1Q12824 385 aa23.86■■□□□ 1.41
NPLOC4-217ENST00000574897 GALNT3Q14435 633 aa23.86■■□□□ 1.41
NPLOC4-217ENST00000574897 DENND1CQ8IV53 801 aa23.86■■□□□ 1.41
NPLOC4-217ENST00000574897 STYXQ8WUJ0 223 aa23.86■■□□□ 1.41
NPLOC4-217ENST00000574897 WBP2Q969T9 261 aa23.86■■□□□ 1.41
NPLOC4-217ENST00000574897 TSNARE1Q96NA8 513 aa23.86■■□□□ 1.41
NPLOC4-217ENST00000574897 NUDCD1Q96RS6 583 aa23.86■■□□□ 1.41
NPLOC4-217ENST00000574897 SIKE1Q9BRV8 207 aa23.86■■□□□ 1.41
NPLOC4-217ENST00000574897 TACO1Q9BSH4 297 aaKnown RBP23.86■■□□□ 1.41
NPLOC4-217ENST00000574897 FAM167BQ9BTA0 163 aa23.86■■□□□ 1.41
NPLOC4-217ENST00000574897 CDH19Q9H159 772 aa23.86■■□□□ 1.41
NPLOC4-217ENST00000574897 SUDS3Q9H7L9 328 aaPredicted RBP23.86■■□□□ 1.41
NPLOC4-217ENST00000574897 PDFQ9HBH1 243 aa23.86■■□□□ 1.41
NPLOC4-217ENST00000574897 DNAJC28Q9NX36 388 aa23.86■■□□□ 1.41
NPLOC4-217ENST00000574897 DONSONQ9NYP3 566 aa23.86■■□□□ 1.41
NPLOC4-217ENST00000574897 DNMT3LQ9UJW3 386 aa23.86■■□□□ 1.41
NPLOC4-217ENST00000574897 ACSL4O60488 711 aa23.85■■□□□ 1.41
NPLOC4-217ENST00000574897 NAGLUP54802 743 aa23.85■■□□□ 1.41
NPLOC4-217ENST00000574897 TDRD5Q8NAT2 981 aaKnown RBP23.85■■□□□ 1.41
NPLOC4-217ENST00000574897 WDR60Q8WVS4 1066 aa23.85■■□□□ 1.41
NPLOC4-217ENST00000574897 HDAC10Q969S8 669 aa23.85■■□□□ 1.41
NPLOC4-217ENST00000574897 NSMCE3Q96MG7 304 aa23.85■■□□□ 1.41
NPLOC4-217ENST00000574897 MARCH4Q9P2E8 410 aaPredicted RBP23.85■■□□□ 1.41
NPLOC4-217ENST00000574897 COL4A6Q14031 1691 aa23.85■■□□□ 1.41
NPLOC4-217ENST00000574897 COCHO43405 550 aa23.85■■□□□ 1.41
NPLOC4-217ENST00000574897 DLX3O60479 287 aa23.85■■□□□ 1.41
NPLOC4-217ENST00000574897 KLKB1P03952 638 aa23.85■■□□□ 1.41
NPLOC4-217ENST00000574897 EZRP15311 586 aaKnown RBP23.85■■□□□ 1.41
NPLOC4-217ENST00000574897 HOXD9P28356 352 aaPredicted RBP23.85■■□□□ 1.41
NPLOC4-217ENST00000574897 KHDC1Q4VXA5 237 aaKnown RBP23.85■■□□□ 1.41
NPLOC4-217ENST00000574897 OR6P1Q8NGX9 317 aa23.85■■□□□ 1.41
NPLOC4-217ENST00000574897 C2orf15Q8WU43 125 aaKnown RBP23.85■■□□□ 1.41
NPLOC4-217ENST00000574897 CLPTM1LQ96KA5 538 aa23.85■■□□□ 1.41
NPLOC4-217ENST00000574897 PRICKLE1Q96MT3 831 aaPredicted RBP23.85■■□□□ 1.41
NPLOC4-217ENST00000574897 CLSTN3Q9BQT9 956 aa23.85■■□□□ 1.41
NPLOC4-217ENST00000574897 CWH43Q9H720 699 aa23.85■■□□□ 1.41
NPLOC4-217ENST00000574897 EBF2Q9HAK2 575 aa23.85■■□□□ 1.41
NPLOC4-217ENST00000574897 RNPEPL1Q9HAU8 725 aa23.85■■□□□ 1.41
NPLOC4-217ENST00000574897 SCAMP3O14828 347 aaKnown RBP23.84■■□□□ 1.41
NPLOC4-217ENST00000574897 EFEMP2O95967 443 aa23.84■■□□□ 1.41
NPLOC4-217ENST00000574897 MAPKAPK2P49137 400 aa23.84■■□□□ 1.41
NPLOC4-217ENST00000574897 YBEYP58557 167 aaPredicted RBP23.84■■□□□ 1.41
NPLOC4-217ENST00000574897 ZNF235Q14590 738 aa23.84■■□□□ 1.41
NPLOC4-217ENST00000574897 KPNB1Q14974 876 aaKnown RBP23.84■■□□□ 1.41
NPLOC4-217ENST00000574897 USP41Q3LFD5 358 aa23.84■■□□□ 1.41
NPLOC4-217ENST00000574897 TMCO4Q5TGY1 634 aa23.84■■□□□ 1.41
NPLOC4-217ENST00000574897 LIPMQ5VYY2 423 aa23.84■■□□□ 1.41
NPLOC4-217ENST00000574897 SH3RF2Q8TEC5 729 aa23.84■■□□□ 1.41
NPLOC4-217ENST00000574897 HEXDCQ8WVB3 486 aa23.84■■□□□ 1.41
NPLOC4-217ENST00000574897 RANBP9Q96S59 729 aa23.84■■□□□ 1.41
NPLOC4-217ENST00000574897 COMMD8Q9NX08 183 aa23.84■■□□□ 1.41
NPLOC4-217ENST00000574897 LOC285095A0A1B0GVY8 99 aa23.84■■□□□ 1.41
NPLOC4-217ENST00000574897 ZNF840PA6NDX5 716 aa23.84■■□□□ 1.41
NPLOC4-217ENST00000574897 TMEM114B3SHH9 223 aa23.84■■□□□ 1.41
NPLOC4-217ENST00000574897 SPECC1L-ADORA2AF8WAN1 911 aa23.84■■□□□ 1.41
NPLOC4-217ENST00000574897 LDB2O43679 373 aa23.84■■□□□ 1.41
NPLOC4-217ENST00000574897 HMGA1P17096 107 aaKnown RBP23.84■■□□□ 1.41
NPLOC4-217ENST00000574897 WASHC2DQ5SRD0 308 aa23.84■■□□□ 1.41
NPLOC4-217ENST00000574897 RNF135Q8IUD6 432 aa23.84■■□□□ 1.41
NPLOC4-217ENST00000574897 EXOC2Q96KP1 924 aa23.84■■□□□ 1.41
NPLOC4-217ENST00000574897 POLR1EQ9GZS1 481 aaKnown RBP23.84■■□□□ 1.41
NPLOC4-217ENST00000574897 STN1Q9H668 368 aaKnown RBP23.84■■□□□ 1.41
NPLOC4-217ENST00000574897 ARL5AQ9Y689 179 aa23.84■■□□□ 1.41
NPLOC4-217ENST00000574897 NEMP2A6NFY4 417 aa23.83■■□□□ 1.41
NPLOC4-217ENST00000574897 MROH6A6NGR9 719 aa23.83■■□□□ 1.41
NPLOC4-217ENST00000574897 KLHL2O95198 593 aa23.83■■□□□ 1.41
NPLOC4-217ENST00000574897 CXCL10P02778 98 aa23.83■■□□□ 1.41
NPLOC4-217ENST00000574897 IRF1P10914 325 aa23.83■■□□□ 1.41
NPLOC4-217ENST00000574897 NCF2P19878 526 aaPredicted RBP23.83■■□□□ 1.41
NPLOC4-217ENST00000574897 PGM1P36871 562 aa23.83■■□□□ 1.41
NPLOC4-217ENST00000574897 RGRP47804 291 aa23.83■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms