RNA–Protein interactions for RNA: ENST00000572253.5

CCDC40-207, Transcript of coiled-coil domain containing 40, humanhuman

TSL 2

Gene CCDC40, Length 3,962 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-207ENST00000572253 CYP4F12Q9HCS2 524 aa10.86□□□□□ -0.67
CCDC40-207ENST00000572253 WDR6Q9NNW5 1121 aaKnown RBP10.86□□□□□ -0.67
CCDC40-207ENST00000572253 CEPT1Q9Y6K0 416 aa10.86□□□□□ -0.67
CCDC40-207ENST00000572253 A0A0G2JMZ2 1700 aa10.86□□□□□ -0.67
CCDC40-207ENST00000572253 LRRC37A2A6NM11 1700 aa10.86□□□□□ -0.67
CCDC40-207ENST00000572253 YJEFN3A6XGL0 299 aa10.86□□□□□ -0.67
CCDC40-207ENST00000572253 NRP1O14786 923 aa10.86□□□□□ -0.67
CCDC40-207ENST00000572253 AKAP10O43572 662 aa10.86□□□□□ -0.67
CCDC40-207ENST00000572253 FGFR3P22607 806 aa10.86□□□□□ -0.67
CCDC40-207ENST00000572253 CDK9P50750 372 aaKnown RBP10.86□□□□□ -0.67
CCDC40-207ENST00000572253 GJA9P57773 515 aa10.86□□□□□ -0.67
CCDC40-207ENST00000572253 TUBA4AP68366 448 aa10.86□□□□□ -0.67
CCDC40-207ENST00000572253 CREB5Q02930 508 aa10.86□□□□□ -0.67
CCDC40-207ENST00000572253 CYP2R1Q6VVX0 501 aa10.86□□□□□ -0.67
CCDC40-207ENST00000572253 FASTKD5Q7L8L6 764 aaKnown RBP10.86□□□□□ -0.67
CCDC40-207ENST00000572253 RNF135Q8IUD6 432 aa10.86□□□□□ -0.67
CCDC40-207ENST00000572253 DCPSQ96C86 337 aaKnown RBP10.86□□□□□ -0.67
CCDC40-207ENST00000572253 PRKD2Q9BZL6 878 aa10.86□□□□□ -0.67
CCDC40-207ENST00000572253 ADAMTS10Q9H324 1103 aa10.86□□□□□ -0.67
CCDC40-207ENST00000572253 CLK4Q9HAZ1 481 aaKnown RBP10.86□□□□□ -0.67
CCDC40-207ENST00000572253 FBXO5Q9UKT4 447 aa10.86□□□□□ -0.67
CCDC40-207ENST00000572253 MCM3APO60318 1980 aa10.85□□□□□ -0.67
CCDC40-207ENST00000572253 BEST1O76090 585 aa10.85□□□□□ -0.67
CCDC40-207ENST00000572253 CDK4P11802 303 aa10.85□□□□□ -0.67
CCDC40-207ENST00000572253 CPB1P15086 417 aa10.85□□□□□ -0.67
CCDC40-207ENST00000572253 KCNE1P15382 129 aa10.85□□□□□ -0.67
CCDC40-207ENST00000572253 SLC5A2P31639 672 aa10.85□□□□□ -0.67
CCDC40-207ENST00000572253 ADCYAP1R1P41586 468 aa10.85□□□□□ -0.67
CCDC40-207ENST00000572253 CSRP3P50461 194 aa10.85□□□□□ -0.67
CCDC40-207ENST00000572253 LILRA4P59901 499 aa10.85□□□□□ -0.67
CCDC40-207ENST00000572253 SULT2A1Q06520 285 aa10.85□□□□□ -0.67
CCDC40-207ENST00000572253 RALGDSQ12967 914 aa10.85□□□□□ -0.67
CCDC40-207ENST00000572253 WSCD1Q658N2 575 aa10.85□□□□□ -0.67
CCDC40-207ENST00000572253 ESRP1Q6NXG1 681 aaKnown RBP10.85□□□□□ -0.67
CCDC40-207ENST00000572253 TAPT1Q6NXT6 567 aa10.85□□□□□ -0.67
CCDC40-207ENST00000572253 LAYNQ6UX15 382 aa10.85□□□□□ -0.67
CCDC40-207ENST00000572253 NUP93Q8N1F7 819 aa10.85□□□□□ -0.67
CCDC40-207ENST00000572253 PELI3Q8N2H9 469 aa10.85□□□□□ -0.67
CCDC40-207ENST00000572253 SPPL2BQ8TCT7 592 aa10.85□□□□□ -0.67
CCDC40-207ENST00000572253 ABTB1Q969K4 478 aaPredicted RBP10.85□□□□□ -0.67
CCDC40-207ENST00000572253 EMID1Q96A84 441 aaPredicted RBP10.85□□□□□ -0.67
CCDC40-207ENST00000572253 TSGA13Q96PP4 275 aa10.85□□□□□ -0.67
CCDC40-207ENST00000572253 GOLGA2P5Q9HBQ8 144 aa10.85□□□□□ -0.67
CCDC40-207ENST00000572253 ENTPD7Q9NQZ7 604 aa10.85□□□□□ -0.67
CCDC40-207ENST00000572253 CHCHD3Q9NX63 227 aaKnown RBP10.85□□□□□ -0.67
CCDC40-207ENST00000572253 SLC8A2Q9UPR5 921 aa10.85□□□□□ -0.67
CCDC40-207ENST00000572253 TCAF1Q9Y4C2 921 aa10.85□□□□□ -0.67
CCDC40-207ENST00000572253 ZSWIM8A7E2V4 1837 aa10.85□□□□□ -0.67
CCDC40-207ENST00000572253 NRP2O60462 931 aa10.85□□□□□ -0.67
CCDC40-207ENST00000572253 IPO13O94829 963 aaKnown RBP10.85□□□□□ -0.67
CCDC40-207ENST00000572253 LRIG2O94898 1065 aa10.85□□□□□ -0.67
CCDC40-207ENST00000572253 LTA4HP09960 611 aaKnown RBP10.85□□□□□ -0.67
CCDC40-207ENST00000572253 GABRB3P28472 473 aa10.85□□□□□ -0.67
CCDC40-207ENST00000572253 PGGT1BP53609 377 aa10.85□□□□□ -0.67
CCDC40-207ENST00000572253 NUP107P57740 925 aa10.85□□□□□ -0.67
CCDC40-207ENST00000572253 INPP5AQ14642 412 aa10.85□□□□□ -0.67
CCDC40-207ENST00000572253 LPIN1Q14693 890 aa10.85□□□□□ -0.67
CCDC40-207ENST00000572253 MTX3Q5HYI7 312 aa10.85□□□□□ -0.67
CCDC40-207ENST00000572253 DCLRE1AQ6PJP8 1040 aa10.85□□□□□ -0.67
CCDC40-207ENST00000572253 CNSTQ6PJW8 725 aa10.85□□□□□ -0.67
CCDC40-207ENST00000572253 CUZD1Q86UP6 607 aa10.85□□□□□ -0.67
CCDC40-207ENST00000572253 CEP97Q8IW35 865 aa10.85□□□□□ -0.67
CCDC40-207ENST00000572253 MYO1HQ8N1T3 1032 aa10.85□□□□□ -0.67
CCDC40-207ENST00000572253 IPO11Q9UI26 975 aaKnown RBP10.85□□□□□ -0.67
CCDC40-207ENST00000572253 PLXNA1Q9UIW2 1896 aa10.85□□□□□ -0.67
CCDC40-207ENST00000572253 H3BNH8 94 aa10.85□□□□□ -0.67
CCDC40-207ENST00000572253 FAM163BP0C2L3 166 aa10.85□□□□□ -0.67
CCDC40-207ENST00000572253 USP17L7P0C7H9 530 aa10.85□□□□□ -0.67
CCDC40-207ENST00000572253 DARSP14868 501 aaKnown RBP10.85□□□□□ -0.67
CCDC40-207ENST00000572253 LRPAP1P30533 357 aa10.85□□□□□ -0.67
CCDC40-207ENST00000572253 SLC1A2P43004 574 aa10.85□□□□□ -0.67
CCDC40-207ENST00000572253 INHBCP55103 352 aa10.85□□□□□ -0.67
CCDC40-207ENST00000572253 NEPROQ6NW34 567 aa10.85□□□□□ -0.67
CCDC40-207ENST00000572253 PAOXQ6QHF9 649 aa10.85□□□□□ -0.67
CCDC40-207ENST00000572253 CHSY3Q70JA7 882 aa10.85□□□□□ -0.67
CCDC40-207ENST00000572253 GPR141Q7Z602 305 aa10.85□□□□□ -0.67
CCDC40-207ENST00000572253 TNIP2Q8NFZ5 429 aa10.85□□□□□ -0.67
CCDC40-207ENST00000572253 PGAP3Q96FM1 320 aaPredicted RBP10.85□□□□□ -0.67
CCDC40-207ENST00000572253 GPR78Q96P69 363 aa10.85□□□□□ -0.67
CCDC40-207ENST00000572253 FCRL5Q96RD9 977 aa10.85□□□□□ -0.67
CCDC40-207ENST00000572253 TCF12Q99081 682 aa10.85□□□□□ -0.67
CCDC40-207ENST00000572253 CIB1Q99828 191 aa10.85□□□□□ -0.67
CCDC40-207ENST00000572253 FTHL17Q9BXU8 183 aa10.85□□□□□ -0.67
CCDC40-207ENST00000572253 MEAF6Q9HAF1 191 aa10.85□□□□□ -0.67
CCDC40-207ENST00000572253 GLOD4Q9HC38 313 aa10.85□□□□□ -0.67
CCDC40-207ENST00000572253 CAMSAP3Q9P1Y5 1249 aaPredicted RBP10.85□□□□□ -0.67
CCDC40-207ENST00000572253 CNOT6Q9ULM6 557 aaKnown RBP10.85□□□□□ -0.67
CCDC40-207ENST00000572253 WDR90Q96KV7 1748 aa10.85□□□□□ -0.67
CCDC40-207ENST00000572253 A0A087WXM4 84 aa10.84□□□□□ -0.67
CCDC40-207ENST00000572253 TCRBV3S1A0A5B6 114 aa10.84□□□□□ -0.67
CCDC40-207ENST00000572253 C7orf72A4D263 438 aa10.84□□□□□ -0.67
CCDC40-207ENST00000572253 IL10P22301 178 aa10.84□□□□□ -0.67
CCDC40-207ENST00000572253 CCNCP24863 283 aa10.84□□□□□ -0.67
CCDC40-207ENST00000572253 LRP8Q14114 963 aa10.84□□□□□ -0.67
CCDC40-207ENST00000572253 MARCH8Q5T0T0 291 aa10.84□□□□□ -0.67
CCDC40-207ENST00000572253 HACD2Q6Y1H2 254 aa10.84□□□□□ -0.67
CCDC40-207ENST00000572253 KIAA0408Q6ZU52 694 aa10.84□□□□□ -0.67
CCDC40-207ENST00000572253 CARM1Q86X55 608 aa10.84□□□□□ -0.67
CCDC40-207ENST00000572253 CROCCP3Q8IVE0 287 aa10.84□□□□□ -0.67
CCDC40-207ENST00000572253 RNF169Q8NCN4 708 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms