RNA–Protein interactions for RNA: ENST00000571688.5

LITAF-209, Transcript of lipopolysaccharide induced TNF factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LITAF, Length 2,632 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-209ENST00000571688 USP51Q70EK9 711 aa16.97■□□□□ 0.31
LITAF-209ENST00000571688 TMEM192Q8IY95 271 aa16.97■□□□□ 0.31
LITAF-209ENST00000571688 NETO2Q8NC67 525 aa16.97■□□□□ 0.31
LITAF-209ENST00000571688 AFG1LQ8WV93 481 aa16.97■□□□□ 0.31
LITAF-209ENST00000571688 CENPNQ96H22 339 aaPredicted RBP16.97■□□□□ 0.31
LITAF-209ENST00000571688 MTG1Q9BT17 334 aaPredicted RBP16.97■□□□□ 0.31
LITAF-209ENST00000571688 MEAF6Q9HAF1 191 aa16.97■□□□□ 0.31
LITAF-209ENST00000571688 RAD54BQ9Y620 910 aa16.97■□□□□ 0.31
LITAF-209ENST00000571688 PARP14Q460N5 1801 aa16.97■□□□□ 0.31
LITAF-209ENST00000571688 USP12O75317 370 aa16.97■□□□□ 0.31
LITAF-209ENST00000571688 MAFO75444 373 aaPredicted RBP16.97■□□□□ 0.31
LITAF-209ENST00000571688 DNAJB1P25685 340 aa16.97■□□□□ 0.31
LITAF-209ENST00000571688 SLC12A1Q13621 1099 aa16.97■□□□□ 0.31
LITAF-209ENST00000571688 CYBRD1Q53TN4 286 aa16.97■□□□□ 0.31
LITAF-209ENST00000571688 TMTC4Q5T4D3 741 aa16.97■□□□□ 0.31
LITAF-209ENST00000571688 FRA10AC1Q70Z53 315 aa16.97■□□□□ 0.31
LITAF-209ENST00000571688 CHST15Q7LFX5 561 aaPredicted RBP16.97■□□□□ 0.31
LITAF-209ENST00000571688 CMTR2Q8IYT2 770 aaKnown RBP16.97■□□□□ 0.31
LITAF-209ENST00000571688 PYROXD2Q8N2H3 581 aa16.97■□□□□ 0.31
LITAF-209ENST00000571688 DHRSXQ8N5I4 330 aa16.97■□□□□ 0.31
LITAF-209ENST00000571688 RAB2BQ8WUD1 216 aa16.97■□□□□ 0.31
LITAF-209ENST00000571688 DCPSQ96C86 337 aaKnown RBP16.97■□□□□ 0.31
LITAF-209ENST00000571688 ZNF347Q96SE7 839 aa16.97■□□□□ 0.31
LITAF-209ENST00000571688 CGREF1Q99674 301 aa16.97■□□□□ 0.31
LITAF-209ENST00000571688 SLC39A3Q9BRY0 314 aa16.97■□□□□ 0.31
LITAF-209ENST00000571688 PSME2Q9UL46 239 aa16.97■□□□□ 0.31
LITAF-209ENST00000571688 KIAA1257Q9ULG3 409 aa16.97■□□□□ 0.31
LITAF-209ENST00000571688 IGKV6D-21A0A0A0MT36 114 aa16.96■□□□□ 0.31
LITAF-209ENST00000571688 GABBR2O75899 941 aa16.96■□□□□ 0.31
LITAF-209ENST00000571688 PABPC1P11940 636 aaKnown RBP16.96■□□□□ 0.31
LITAF-209ENST00000571688 ATICP31939 592 aa16.96■□□□□ 0.31
LITAF-209ENST00000571688 IDUAP35475 653 aa16.96■□□□□ 0.31
LITAF-209ENST00000571688 YAP1P46937 504 aaKnown RBP16.96■□□□□ 0.31
LITAF-209ENST00000571688 INPP5AQ14642 412 aa16.96■□□□□ 0.31
LITAF-209ENST00000571688 USP10Q14694 798 aaKnown RBP16.96■□□□□ 0.31
LITAF-209ENST00000571688 PKDCCQ504Y2 493 aa16.96■□□□□ 0.31
LITAF-209ENST00000571688 NEPROQ6NW34 567 aa16.96■□□□□ 0.31
LITAF-209ENST00000571688 ZC3HC1Q86WB0 502 aaKnown RBP16.96■□□□□ 0.31
LITAF-209ENST00000571688 C12orf29Q8N999 325 aa16.96■□□□□ 0.31
LITAF-209ENST00000571688 GOLM1Q8NBJ4 401 aa16.96■□□□□ 0.31
LITAF-209ENST00000571688 EFHD2Q96C19 240 aaPredicted RBP16.96■□□□□ 0.31
LITAF-209ENST00000571688 WNK4Q96J92 1243 aa16.96■□□□□ 0.31
LITAF-209ENST00000571688 TRIM15Q9C019 465 aa16.96■□□□□ 0.31
LITAF-209ENST00000571688 OSBPL2Q9H1P3 480 aa16.96■□□□□ 0.31
LITAF-209ENST00000571688 CASS4Q9NQ75 786 aa16.96■□□□□ 0.31
LITAF-209ENST00000571688 FAM49BQ9NUQ9 324 aa16.96■□□□□ 0.31
LITAF-209ENST00000571688 GTSE1Q9NYZ3 720 aa16.96■□□□□ 0.31
LITAF-209ENST00000571688 PKD2L2Q9NZM6 624 aa16.96■□□□□ 0.31
LITAF-209ENST00000571688 IFT80Q9P2H3 777 aaPredicted RBP16.96■□□□□ 0.31
LITAF-209ENST00000571688 EI24O14681 340 aa16.96■□□□□ 0.3
LITAF-209ENST00000571688 AP2A1O95782 977 aa16.96■□□□□ 0.3
LITAF-209ENST00000571688 MBL2P11226 248 aaPredicted RBP16.96■□□□□ 0.3
LITAF-209ENST00000571688 IL10P22301 178 aa16.96■□□□□ 0.3
LITAF-209ENST00000571688 S100A1P23297 94 aa16.96■□□□□ 0.3
LITAF-209ENST00000571688 ATP6V0D1P61421 351 aa16.96■□□□□ 0.3
LITAF-209ENST00000571688 CCNYL2Q5T2Q4 361 aa16.96■□□□□ 0.3
LITAF-209ENST00000571688 ZNF773Q6PK81 442 aa16.96■□□□□ 0.3
LITAF-209ENST00000571688 PIWIL4Q7Z3Z4 852 aaKnown RBP16.96■□□□□ 0.3
LITAF-209ENST00000571688 ZBTB8OSQ8IWT0 167 aa16.96■□□□□ 0.3
LITAF-209ENST00000571688 CADM3Q8N126 398 aa16.96■□□□□ 0.3
LITAF-209ENST00000571688 SNX19Q92543 992 aa16.96■□□□□ 0.3
LITAF-209ENST00000571688 GLT1D1Q96MS3 346 aa16.96■□□□□ 0.3
LITAF-209ENST00000571688 GPR78Q96P69 363 aa16.96■□□□□ 0.3
LITAF-209ENST00000571688 B3GNT5Q9BYG0 378 aa16.96■□□□□ 0.3
LITAF-209ENST00000571688 RHOJQ9H4E5 214 aa16.96■□□□□ 0.3
LITAF-209ENST00000571688 RPF1Q9H9Y2 349 aaKnown RBP16.96■□□□□ 0.3
LITAF-209ENST00000571688 SAT1P21673 171 aa16.95■□□□□ 0.3
LITAF-209ENST00000571688 NFKBIAP25963 317 aa16.95■□□□□ 0.3
LITAF-209ENST00000571688 AVPR1AP37288 418 aa16.95■□□□□ 0.3
LITAF-209ENST00000571688 ARL4AP40617 200 aa16.95■□□□□ 0.3
LITAF-209ENST00000571688 C1QTNF8P60827 252 aa16.95■□□□□ 0.3
LITAF-209ENST00000571688 TUBA3CQ13748 450 aa16.95■□□□□ 0.3
LITAF-209ENST00000571688 PPP1R3AQ16821 1122 aa16.95■□□□□ 0.3
LITAF-209ENST00000571688 EEF1DP3Q658K8 133 aa16.95■□□□□ 0.3
LITAF-209ENST00000571688 THOC7Q6I9Y2 204 aaKnown RBP16.95■□□□□ 0.3
LITAF-209ENST00000571688 PSTKQ8IV42 348 aaKnown RBP16.95■□□□□ 0.3
LITAF-209ENST00000571688 SNX31Q8N9S9 440 aa16.95■□□□□ 0.3
LITAF-209ENST00000571688 ROPN1LQ96C74 230 aa16.95■□□□□ 0.3
LITAF-209ENST00000571688 TBC1D13Q9NVG8 400 aa16.95■□□□□ 0.3
LITAF-209ENST00000571688 SMPD3Q9NY59 655 aaPredicted RBP16.95■□□□□ 0.3
LITAF-209ENST00000571688 GPRC5DQ9NZD1 345 aa16.95■□□□□ 0.3
LITAF-209ENST00000571688 COL11A1P12107 1806 aaPredicted RBP16.95■□□□□ 0.3
LITAF-209ENST00000571688 VWA5AO00534 786 aa16.95■□□□□ 0.3
LITAF-209ENST00000571688 NME4O00746 187 aa16.95■□□□□ 0.3
LITAF-209ENST00000571688 KDM1AO60341 852 aa16.95■□□□□ 0.3
LITAF-209ENST00000571688 PSMA4P25789 261 aaKnown RBP16.95■□□□□ 0.3
LITAF-209ENST00000571688 LAMTOR4Q0VGL1 99 aa16.95■□□□□ 0.3
LITAF-209ENST00000571688 PSMD5Q16401 504 aa16.95■□□□□ 0.3
LITAF-209ENST00000571688 ATF7IP2Q5U623 682 aa16.95■□□□□ 0.3
LITAF-209ENST00000571688 LCN8Q6JVE9 175 aa16.95■□□□□ 0.3
LITAF-209ENST00000571688 PID1Q7Z2X4 250 aa16.95■□□□□ 0.3
LITAF-209ENST00000571688 CDR2LQ86X02 465 aaPredicted RBP16.95■□□□□ 0.3
LITAF-209ENST00000571688 SPPL2CQ8IUH8 684 aa16.95■□□□□ 0.3
LITAF-209ENST00000571688 TMCO5AQ8N6Q1 288 aa16.95■□□□□ 0.3
LITAF-209ENST00000571688 TXNDC5Q8NBS9 432 aaKnown RBP16.95■□□□□ 0.3
LITAF-209ENST00000571688 RNF149Q8NC42 400 aa16.95■□□□□ 0.3
LITAF-209ENST00000571688 CCDC97Q96F63 343 aaPredicted RBP16.95■□□□□ 0.3
LITAF-209ENST00000571688 FAR2Q96K12 515 aa16.95■□□□□ 0.3
LITAF-209ENST00000571688 MYRFLQ96LU7 910 aa16.95■□□□□ 0.3
LITAF-209ENST00000571688 CSF3RQ99062 836 aa16.95■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms