RNA–Protein interactions for RNA: ENST00000571643.5

CDC27-213, Transcript of cell division cycle 27, human

TSL 3

Gene CDC27, Length 716 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDC27-213	ENST00000571643	RAD52	P43351	418 aa		3.84	□□□□□ -1.79
CDC27-213	ENST00000571643	RFX5	P48382	616 aa	Predicted RBP	3.84	□□□□□ -1.79
CDC27-213	ENST00000571643	SOX2	P48431	317 aa		3.84	□□□□□ -1.79
CDC27-213	ENST00000571643	ZNF84	P51523	738 aa		3.84	□□□□□ -1.79
CDC27-213	ENST00000571643	PLIN5	Q00G26	463 aa		3.84	□□□□□ -1.79
CDC27-213	ENST00000571643	DMWD	Q09019	674 aa		3.84	□□□□□ -1.79
CDC27-213	ENST00000571643	CSHL1	Q14406	222 aa		3.84	□□□□□ -1.79
CDC27-213	ENST00000571643	INPP5J	Q15735	1006 aa	Predicted RBP	3.84	□□□□□ -1.79
CDC27-213	ENST00000571643	PRTG	Q2VWP7	1150 aa		3.84	□□□□□ -1.79
CDC27-213	ENST00000571643	P3H1	Q32P28	736 aa		3.84	□□□□□ -1.79
CDC27-213	ENST00000571643	CAVIN4	Q5BKX8	364 aa		3.84	□□□□□ -1.79
CDC27-213	ENST00000571643	SPATA1	Q5VX52	437 aa		3.84	□□□□□ -1.79
CDC27-213	ENST00000571643	RUSC1-AS1	Q66K80	236 aa		3.84	□□□□□ -1.79
CDC27-213	ENST00000571643	ARL6IP4	Q66PJ3	421 aa	Known RBP	3.84	□□□□□ -1.79
CDC27-213	ENST00000571643	XRRA1	Q6P2D8	792 aa		3.84	□□□□□ -1.79
CDC27-213	ENST00000571643	LRIG3	Q6UXM1	1119 aa		3.84	□□□□□ -1.79
CDC27-213	ENST00000571643	CCDC73	Q6ZRK6	1079 aa		3.84	□□□□□ -1.79
CDC27-213	ENST00000571643	KIAA0408	Q6ZU52	694 aa		3.84	□□□□□ -1.79
CDC27-213	ENST00000571643	B4GALNT4	Q76KP1	1039 aa		3.84	□□□□□ -1.79
CDC27-213	ENST00000571643	LAS2	Q8IYD9	372 aa		3.84	□□□□□ -1.79
CDC27-213	ENST00000571643	TEX9	Q8N6V9	391 aa		3.84	□□□□□ -1.79
CDC27-213	ENST00000571643	TDRD7	Q8NHU6	1098 aa	Known RBP	3.84	□□□□□ -1.79
CDC27-213	ENST00000571643	PARD3B	Q8TEW8	1205 aa		3.84	□□□□□ -1.79
CDC27-213	ENST00000571643	TBC1D22A	Q8WUA7	517 aa		3.84	□□□□□ -1.79
CDC27-213	ENST00000571643	CENPI	Q92674	756 aa	Predicted RBP	3.84	□□□□□ -1.79
CDC27-213	ENST00000571643	FRAT1	Q92837	279 aa	Predicted RBP	3.84	□□□□□ -1.79
CDC27-213	ENST00000571643	ATP6V1E2	Q96A05	226 aa		3.84	□□□□□ -1.79
CDC27-213	ENST00000571643	SLC25A28	Q96A46	364 aa		3.84	□□□□□ -1.79
CDC27-213	ENST00000571643	ZBTB10	Q96DT7	871 aa		3.84	□□□□□ -1.79
CDC27-213	ENST00000571643	FAR2	Q96K12	515 aa		3.84	□□□□□ -1.79
CDC27-213	ENST00000571643	GATA5	Q9BWX5	397 aa	Predicted RBP	3.84	□□□□□ -1.79
CDC27-213	ENST00000571643	MRPL9	Q9BYD2	267 aa	Known RBP	3.84	□□□□□ -1.79
CDC27-213	ENST00000571643	PCDHAC1	Q9H158	963 aa		3.84	□□□□□ -1.79
CDC27-213	ENST00000571643	BICC1	Q9H694	974 aa	Known RBP	3.84	□□□□□ -1.79
CDC27-213	ENST00000571643	CD209	Q9NNX6	404 aa		3.84	□□□□□ -1.79
CDC27-213	ENST00000571643	FZD3	Q9NPG1	666 aa		3.84	□□□□□ -1.79
CDC27-213	ENST00000571643	GPR108	Q9NPR9	543 aa		3.84	□□□□□ -1.79
CDC27-213	ENST00000571643	SMYD2	Q9NRG4	433 aa		3.84	□□□□□ -1.79
CDC27-213	ENST00000571643	PDP2	Q9P2J9	529 aa		3.84	□□□□□ -1.79
CDC27-213	ENST00000571643	ZMYND8	Q9ULU4	1186 aa	Predicted RBP	3.84	□□□□□ -1.79
CDC27-213	ENST00000571643	SLC8A2	Q9UPR5	921 aa		3.84	□□□□□ -1.79
CDC27-213	ENST00000571643	FAM205A	Q6ZU69	1335 aa		3.84	□□□□□ -1.79
CDC27-213	ENST00000571643	CNTNAP2	Q9UHC6	1331 aa		3.84	□□□□□ -1.79
CDC27-213	ENST00000571643		A0A1B0GUL6	1792 aa		3.84	□□□□□ -1.8
CDC27-213	ENST00000571643	CCDC187	A0A096LP49	1063 aa		3.83	□□□□□ -1.8
CDC27-213	ENST00000571643	KIR2DS5	A0A0G2JLQ3	304 aa		3.83	□□□□□ -1.8
CDC27-213	ENST00000571643	DPPA5	A6NC42	116 aa		3.83	□□□□□ -1.8
CDC27-213	ENST00000571643	TRIM64C	A6NLI5	447 aa		3.83	□□□□□ -1.8
CDC27-213	ENST00000571643	YDJC	A8MPS7	323 aa		3.83	□□□□□ -1.8
CDC27-213	ENST00000571643	LACTBL1	A8MY62	500 aa		3.83	□□□□□ -1.8
CDC27-213	ENST00000571643	KIR2DS3	K7RE56	304 aa		3.83	□□□□□ -1.8
CDC27-213	ENST00000571643	EPN2	O95208	641 aa		3.83	□□□□□ -1.8
CDC27-213	ENST00000571643	GLP2R	O95838	553 aa		3.83	□□□□□ -1.8
CDC27-213	ENST00000571643	IGHD	P01880	384 aa		3.83	□□□□□ -1.8
CDC27-213	ENST00000571643	CAPN3	P20807	821 aa		3.83	□□□□□ -1.8
CDC27-213	ENST00000571643	GABRB3	P28472	473 aa		3.83	□□□□□ -1.8
CDC27-213	ENST00000571643	KIF5B	P33176	963 aa		3.83	□□□□□ -1.8
CDC27-213	ENST00000571643	EPHX2	P34913	555 aa		3.83	□□□□□ -1.8
CDC27-213	ENST00000571643	SNX16	P57768	344 aa		3.83	□□□□□ -1.8
CDC27-213	ENST00000571643	KRTAP10-7	P60409	375 aa	Predicted RBP	3.83	□□□□□ -1.8
CDC27-213	ENST00000571643	ERV3-1	Q14264	604 aa		3.83	□□□□□ -1.8
CDC27-213	ENST00000571643	MVP	Q14764	893 aa	Known RBP	3.83	□□□□□ -1.8
CDC27-213	ENST00000571643	PSMD6	Q15008	389 aa		3.83	□□□□□ -1.8
CDC27-213	ENST00000571643	MAPKAPK3	Q16644	382 aa		3.83	□□□□□ -1.8
CDC27-213	ENST00000571643	LIPM	Q5VYY2	423 aa		3.83	□□□□□ -1.8
CDC27-213	ENST00000571643	RETSAT	Q6NUM9	610 aa		3.83	□□□□□ -1.8
CDC27-213	ENST00000571643	FAM180B	Q6P0A1	224 aa		3.83	□□□□□ -1.8
CDC27-213	ENST00000571643	ZNF549	Q6P9A3	640 aa		3.83	□□□□□ -1.8
CDC27-213	ENST00000571643	FBXO38	Q6PIJ6	1188 aa		3.83	□□□□□ -1.8
CDC27-213	ENST00000571643	CPLX2	Q6PUV4	134 aa	Known RBP	3.83	□□□□□ -1.8
CDC27-213	ENST00000571643	OLFM4	Q6UX06	510 aa		3.83	□□□□□ -1.8
CDC27-213	ENST00000571643	DHRS13	Q6UX07	377 aa		3.83	□□□□□ -1.8
CDC27-213	ENST00000571643	KYAT3	Q6YP21	454 aa	Known RBP	3.83	□□□□□ -1.8
CDC27-213	ENST00000571643	DPP9	Q86TI2	863 aa		3.83	□□□□□ -1.8
CDC27-213	ENST00000571643	ERC1	Q8IUD2	1116 aa		3.83	□□□□□ -1.8
CDC27-213	ENST00000571643	ADHFE1	Q8IWW8	467 aa		3.83	□□□□□ -1.8
CDC27-213	ENST00000571643	SRFBP1	Q8NEF9	429 aa	Known RBP	3.83	□□□□□ -1.8
CDC27-213	ENST00000571643	BRI3BP	Q8WY22	251 aa		3.83	□□□□□ -1.8
CDC27-213	ENST00000571643	LPAR1	Q92633	364 aa		3.83	□□□□□ -1.8
CDC27-213	ENST00000571643	HDAC2	Q92769	488 aa	Known RBP	3.83	□□□□□ -1.8
CDC27-213	ENST00000571643	TBC1D31	Q96DN5	1066 aa		3.83	□□□□□ -1.8
CDC27-213	ENST00000571643	VMP1	Q96GC9	406 aa		3.83	□□□□□ -1.8
CDC27-213	ENST00000571643	SPAG5	Q96R06	1193 aa		3.83	□□□□□ -1.8
CDC27-213	ENST00000571643	EIF2AK1	Q9BQI3	630 aa	Known RBP	3.83	□□□□□ -1.8
CDC27-213	ENST00000571643	NUDT16L1	Q9BRJ7	211 aa	Known RBP	3.83	□□□□□ -1.8
CDC27-213	ENST00000571643	TMEM204	Q9BSN7	226 aa		3.83	□□□□□ -1.8
CDC27-213	ENST00000571643	XPO4	Q9C0E2	1151 aa	Known RBP	3.83	□□□□□ -1.8
CDC27-213	ENST00000571643	TASP1	Q9H6P5	420 aa		3.83	□□□□□ -1.8
CDC27-213	ENST00000571643	MLXIPL	Q9NP71	852 aa		3.83	□□□□□ -1.8
CDC27-213	ENST00000571643	THSD1	Q9NS62	852 aa		3.83	□□□□□ -1.8
CDC27-213	ENST00000571643	BLOC1S4	Q9NUP1	217 aa		3.83	□□□□□ -1.8
CDC27-213	ENST00000571643	NKIRAS2	Q9NYR9	191 aa		3.83	□□□□□ -1.8
CDC27-213	ENST00000571643	FRMD4A	Q9P2Q2	1039 aa	Predicted RBP	3.83	□□□□□ -1.8
CDC27-213	ENST00000571643	EPS15L1	Q9UBC2	864 aa		3.83	□□□□□ -1.8
CDC27-213	ENST00000571643	SEL1L	Q9UBV2	794 aa		3.83	□□□□□ -1.8
CDC27-213	ENST00000571643	NOL12	Q9UGY1	213 aa	Known RBP eCLIP	3.83	□□□□□ -1.8
CDC27-213	ENST00000571643	CNOT7	Q9UIV1	285 aa	Known RBP	3.83	□□□□□ -1.8
CDC27-213	ENST00000571643	GJD2	Q9UKL4	321 aa		3.83	□□□□□ -1.8
CDC27-213	ENST00000571643	NFU1	Q9UMS0	254 aa		3.83	□□□□□ -1.8
CDC27-213	ENST00000571643	PCDHA12	Q9UN75	941 aa		3.83	□□□□□ -1.8

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