RNA–Protein interactions for RNA: ENST00000569653.1

GTF3C1-211, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 2

Gene GTF3C1, Length 897 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-211ENST00000569653 BRINP1O60477 761 aa14.02□□□□□ -0.17
GTF3C1-211ENST00000569653 BUB1BO60566 1050 aaPredicted RBP14.02□□□□□ -0.17
GTF3C1-211ENST00000569653 MMP20O60882 483 aa14.02□□□□□ -0.17
GTF3C1-211ENST00000569653 GCATO75600 419 aa14.02□□□□□ -0.17
GTF3C1-211ENST00000569653 POP4O95707 220 aaKnown RBP14.02□□□□□ -0.17
GTF3C1-211ENST00000569653 CELA2BP08218 269 aaPredicted RBP14.02□□□□□ -0.17
GTF3C1-211ENST00000569653 HNF1BP35680 557 aa14.02□□□□□ -0.17
GTF3C1-211ENST00000569653 SNRPD1P62314 119 aaKnown RBP14.02□□□□□ -0.17
GTF3C1-211ENST00000569653 CCDC15Q0P6D6 951 aa14.02□□□□□ -0.17
GTF3C1-211ENST00000569653 MAMLD1Q13495 774 aa14.02□□□□□ -0.17
GTF3C1-211ENST00000569653 PDE1CQ14123 709 aaPredicted RBP14.02□□□□□ -0.17
GTF3C1-211ENST00000569653 EFHC2Q5JST6 749 aa14.02□□□□□ -0.17
GTF3C1-211ENST00000569653 VPS36Q86VN1 386 aa14.02□□□□□ -0.17
GTF3C1-211ENST00000569653 TP53INP2Q8IXH6 220 aa14.02□□□□□ -0.17
GTF3C1-211ENST00000569653 NPWQ8N729 165 aa14.02□□□□□ -0.17
GTF3C1-211ENST00000569653 TP53I13Q8NBR0 393 aaPredicted RBP14.02□□□□□ -0.17
GTF3C1-211ENST00000569653 FUBP1Q96AE4 644 aaKnown RBP14.02□□□□□ -0.17
GTF3C1-211ENST00000569653 CELF6Q96J87 481 aaKnown RBP14.02□□□□□ -0.17
GTF3C1-211ENST00000569653 GDAP1L1Q96MZ0 367 aa14.02□□□□□ -0.17
GTF3C1-211ENST00000569653 DCBLD2Q96PD2 775 aa14.02□□□□□ -0.17
GTF3C1-211ENST00000569653 WRAP53Q9BUR4 548 aaKnown RBP14.02□□□□□ -0.17
GTF3C1-211ENST00000569653 RTN4Q9NQC3 1192 aaKnown RBP14.02□□□□□ -0.17
GTF3C1-211ENST00000569653 NLGN3Q9NZ94 848 aa14.02□□□□□ -0.17
GTF3C1-211ENST00000569653 CLCA2Q9UQC9 943 aa14.02□□□□□ -0.17
GTF3C1-211ENST00000569653 MFHAS1Q9Y4C4 1052 aa14.02□□□□□ -0.17
GTF3C1-211ENST00000569653 SYCE3A1L190 88 aa14.01□□□□□ -0.17
GTF3C1-211ENST00000569653 LRRC53A6NM62 1247 aa14.01□□□□□ -0.17
GTF3C1-211ENST00000569653 OPA1O60313 960 aa14.01□□□□□ -0.17
GTF3C1-211ENST00000569653 MT-CO3P00414 261 aa14.01□□□□□ -0.17
GTF3C1-211ENST00000569653 PRKCGP05129 697 aa14.01□□□□□ -0.17
GTF3C1-211ENST00000569653 CDK4P11802 303 aa14.01□□□□□ -0.17
GTF3C1-211ENST00000569653 FERP16591 822 aa14.01□□□□□ -0.17
GTF3C1-211ENST00000569653 RABIFP47224 123 aa14.01□□□□□ -0.17
GTF3C1-211ENST00000569653 ZNF165P49910 485 aa14.01□□□□□ -0.17
GTF3C1-211ENST00000569653 GEMIN4P57678 1058 aaKnown RBP14.01□□□□□ -0.17
GTF3C1-211ENST00000569653 DAB2P98082 770 aa14.01□□□□□ -0.17
GTF3C1-211ENST00000569653 INO80DQ53TQ3 878 aaPredicted RBP14.01□□□□□ -0.17
GTF3C1-211ENST00000569653 PLEKHA7Q6IQ23 1121 aa14.01□□□□□ -0.17
GTF3C1-211ENST00000569653 ARHGAP36Q6ZRI8 547 aa14.01□□□□□ -0.17
GTF3C1-211ENST00000569653 ZNF571Q7Z3V5 609 aaPredicted RBP14.01□□□□□ -0.17
GTF3C1-211ENST00000569653 PARGQ86W56 976 aa14.01□□□□□ -0.17
GTF3C1-211ENST00000569653 ARHGAP12Q8IWW6 846 aa14.01□□□□□ -0.17
GTF3C1-211ENST00000569653 CACTIN-AS1Q8N1I8 211 aa14.01□□□□□ -0.17
GTF3C1-211ENST00000569653 FAM181AQ8N9Y4 354 aa14.01□□□□□ -0.17
GTF3C1-211ENST00000569653 DENND6BQ8NEG7 585 aa14.01□□□□□ -0.17
GTF3C1-211ENST00000569653 ASB12Q8WXK4 309 aa14.01□□□□□ -0.17
GTF3C1-211ENST00000569653 RAB7BQ96AH8 199 aa14.01□□□□□ -0.17
GTF3C1-211ENST00000569653 KCTD15Q96SI1 283 aaPredicted RBP14.01□□□□□ -0.17
GTF3C1-211ENST00000569653 OSBPL1AQ9BXW6 950 aa14.01□□□□□ -0.17
GTF3C1-211ENST00000569653 SLC39A8Q9C0K1 460 aa14.01□□□□□ -0.17
GTF3C1-211ENST00000569653 NRSN2Q9GZP1 204 aa14.01□□□□□ -0.17
GTF3C1-211ENST00000569653 HPCAL4Q9UM19 191 aa14.01□□□□□ -0.17
GTF3C1-211ENST00000569653 COQ6Q9Y2Z9 468 aa14.01□□□□□ -0.17
GTF3C1-211ENST00000569653 RAI2Q9Y5P3 530 aa14.01□□□□□ -0.17
GTF3C1-211ENST00000569653 TSPAN11A1L157 253 aa14□□□□□ -0.17
GTF3C1-211ENST00000569653 PMS2P1A4D2B8 440 aa14□□□□□ -0.17
GTF3C1-211ENST00000569653 ZSCAN5CA6NGD5 496 aaPredicted RBP14□□□□□ -0.17
GTF3C1-211ENST00000569653 DDX3XO00571 662 aaKnown RBP eCLIP14□□□□□ -0.17
GTF3C1-211ENST00000569653 FPGTO14772 594 aa14□□□□□ -0.17
GTF3C1-211ENST00000569653 MUSKO15146 869 aa14□□□□□ -0.17
GTF3C1-211ENST00000569653 IGSF6O95976 241 aa14□□□□□ -0.17
GTF3C1-211ENST00000569653 TCF4P15884 667 aa14□□□□□ -0.17
GTF3C1-211ENST00000569653 JUNDP17535 347 aa14□□□□□ -0.17
GTF3C1-211ENST00000569653 EIF2S3P41091 472 aaKnown RBP14□□□□□ -0.17
GTF3C1-211ENST00000569653 YBEYP58557 167 aaPredicted RBP14□□□□□ -0.17
GTF3C1-211ENST00000569653 RHOAP61586 193 aa14□□□□□ -0.17
GTF3C1-211ENST00000569653 IRF4Q15306 451 aa14□□□□□ -0.17
GTF3C1-211ENST00000569653 SKOR2Q2VWA4 1001 aaPredicted RBP14□□□□□ -0.17
GTF3C1-211ENST00000569653 DEFB133Q30KQ1 61 aa14□□□□□ -0.17
GTF3C1-211ENST00000569653 AFMIDQ63HM1 303 aa14□□□□□ -0.17
GTF3C1-211ENST00000569653 GUSBP11Q6P575 273 aa14□□□□□ -0.17
GTF3C1-211ENST00000569653 TTC7BQ86TV6 843 aa14□□□□□ -0.17
GTF3C1-211ENST00000569653 NAP1L5Q96NT1 182 aaPredicted RBP14□□□□□ -0.17
GTF3C1-211ENST00000569653 EPAS1Q99814 870 aa14□□□□□ -0.17
GTF3C1-211ENST00000569653 SNRNP25Q9BV90 132 aaKnown RBP14□□□□□ -0.17
GTF3C1-211ENST00000569653 LRRC61Q9BV99 259 aa14□□□□□ -0.17
GTF3C1-211ENST00000569653 CLPBQ9H078 707 aa14□□□□□ -0.17
GTF3C1-211ENST00000569653 DKK3Q9UBP4 350 aa14□□□□□ -0.17
GTF3C1-211ENST00000569653 AP4E1Q9UPM8 1137 aa14□□□□□ -0.17
GTF3C1-211ENST00000569653 ARHGEF17Q96PE2 2063 aaPredicted RBP14□□□□□ -0.17
GTF3C1-211ENST00000569653 TMEM191CA6NGB0 347 aa13.99□□□□□ -0.17
GTF3C1-211ENST00000569653 NEMP1O14524 444 aa13.99□□□□□ -0.17
GTF3C1-211ENST00000569653 PRAMEF11O60813 436 aa13.99□□□□□ -0.17
GTF3C1-211ENST00000569653 TGM2P21980 687 aa13.99□□□□□ -0.17
GTF3C1-211ENST00000569653 TPI1P60174 286 aa13.99□□□□□ -0.17
GTF3C1-211ENST00000569653 HNRNPKP61978 463 aaKnown RBP eCLIP13.99□□□□□ -0.17
GTF3C1-211ENST00000569653 SGCGQ13326 291 aa13.99□□□□□ -0.17
GTF3C1-211ENST00000569653 C1orf61Q13536 156 aa13.99□□□□□ -0.17
GTF3C1-211ENST00000569653 CDKN3Q16667 212 aa13.99□□□□□ -0.17
GTF3C1-211ENST00000569653 WSCD2Q2TBF2 565 aa13.99□□□□□ -0.17
GTF3C1-211ENST00000569653 PARP15Q460N3 678 aa13.99□□□□□ -0.17
GTF3C1-211ENST00000569653 TMEM52BQ4KMG9 183 aa13.99□□□□□ -0.17
GTF3C1-211ENST00000569653 FILIP1LQ4L180 1135 aa13.99□□□□□ -0.17
GTF3C1-211ENST00000569653 PERM1Q5SV97 790 aa13.99□□□□□ -0.17
GTF3C1-211ENST00000569653 DCUN1D2Q6PH85 259 aa13.99□□□□□ -0.17
GTF3C1-211ENST00000569653 CRTC1Q6UUV9 634 aa13.99□□□□□ -0.17
GTF3C1-211ENST00000569653 ZNF354CQ86Y25 554 aa13.99□□□□□ -0.17
GTF3C1-211ENST00000569653 DCP2Q8IU60 420 aaKnown RBP13.99□□□□□ -0.17
GTF3C1-211ENST00000569653 SNIP1Q8TAD8 396 aaKnown RBP13.99□□□□□ -0.17
GTF3C1-211ENST00000569653 FAM174AQ8TBP5 190 aa13.99□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms