RNA–Protein interactions for RNA: ENST00000568922.1

GGA2-213, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 2, humanhuman

TSL 2

Gene GGA2, Length 1,807 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA2-213ENST00000568922 CERS2Q96G23 380 aa12.74□□□□□ -0.37
GGA2-213ENST00000568922 NECTIN4Q96NY8 510 aa12.74□□□□□ -0.37
GGA2-213ENST00000568922 TRIB3Q96RU7 358 aa12.74□□□□□ -0.37
GGA2-213ENST00000568922 TDRD1Q9BXT4 1180 aaKnown RBP12.74□□□□□ -0.37
GGA2-213ENST00000568922 CEP44Q9C0F1 390 aa12.74□□□□□ -0.37
GGA2-213ENST00000568922 EBF3Q9H4W6 596 aa12.74□□□□□ -0.37
GGA2-213ENST00000568922 CHRAC1Q9NRG0 131 aa12.74□□□□□ -0.37
GGA2-213ENST00000568922 CTNNAL1Q9UBT7 734 aa12.74□□□□□ -0.37
GGA2-213ENST00000568922 PRKAG3Q9UGI9 489 aa12.74□□□□□ -0.37
GGA2-213ENST00000568922 ZCWPW2A0A1B0GU75 182 aa12.73□□□□□ -0.37
GGA2-213ENST00000568922 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP12.73□□□□□ -0.37
GGA2-213ENST00000568922 HEATR9A2RTY3 570 aa12.73□□□□□ -0.37
GGA2-213ENST00000568922 SMAD6O43541 496 aaKnown RBP12.73□□□□□ -0.37
GGA2-213ENST00000568922 IGSF6O95976 241 aa12.73□□□□□ -0.37
GGA2-213ENST00000568922 INHBAP08476 426 aa12.73□□□□□ -0.37
GGA2-213ENST00000568922 SRCP12931 536 aa12.73□□□□□ -0.37
GGA2-213ENST00000568922 ARSAP15289 507 aa12.73□□□□□ -0.37
GGA2-213ENST00000568922 POLR2EP19388 210 aaKnown RBP12.73□□□□□ -0.37
GGA2-213ENST00000568922 IGFBP4P22692 258 aa12.73□□□□□ -0.37
GGA2-213ENST00000568922 ECT2LQ008S8 904 aa12.73□□□□□ -0.37
GGA2-213ENST00000568922 MGAT5Q09328 741 aa12.73□□□□□ -0.37
GGA2-213ENST00000568922 LAMB3Q13751 1172 aa12.73□□□□□ -0.37
GGA2-213ENST00000568922 ADGRE1Q14246 886 aa12.73□□□□□ -0.37
GGA2-213ENST00000568922 TMED2Q15363 201 aa12.73□□□□□ -0.37
GGA2-213ENST00000568922 MBLAC2Q68D91 279 aa12.73□□□□□ -0.37
GGA2-213ENST00000568922 TAOK1Q7L7X3 1001 aa12.73□□□□□ -0.37
GGA2-213ENST00000568922 SLC26A11Q86WA9 606 aa12.73□□□□□ -0.37
GGA2-213ENST00000568922 RNF135Q8IUD6 432 aa12.73□□□□□ -0.37
GGA2-213ENST00000568922 CTAGE3PQ8IX95 158 aa12.73□□□□□ -0.37
GGA2-213ENST00000568922 YAF2Q8IY57 180 aa12.73□□□□□ -0.37
GGA2-213ENST00000568922 CNPY4Q8N129 248 aa12.73□□□□□ -0.37
GGA2-213ENST00000568922 PPM1NQ8N819 430 aa12.73□□□□□ -0.37
GGA2-213ENST00000568922 DCAKDQ8WVC6 231 aa12.73□□□□□ -0.37
GGA2-213ENST00000568922 ZFYVE19Q96K21 471 aa12.73□□□□□ -0.37
GGA2-213ENST00000568922 FCRL3Q96P31 734 aaPredicted RBP12.73□□□□□ -0.37
GGA2-213ENST00000568922 POMKQ9H5K3 350 aa12.73□□□□□ -0.37
GGA2-213ENST00000568922 ECT2Q9H8V3 914 aa12.73□□□□□ -0.37
GGA2-213ENST00000568922 PPANQ9NQ55 473 aaKnown RBP12.73□□□□□ -0.37
GGA2-213ENST00000568922 TBK1Q9UHD2 729 aa12.73□□□□□ -0.37
GGA2-213ENST00000568922 ZNF180Q9UJW8 692 aa12.73□□□□□ -0.37
GGA2-213ENST00000568922 SLC27A6Q9Y2P4 619 aa12.73□□□□□ -0.37
GGA2-213ENST00000568922 RAI2Q9Y5P3 530 aa12.73□□□□□ -0.37
GGA2-213ENST00000568922 KIAA1549LQ6ZVL6 1849 aa12.72□□□□□ -0.37
GGA2-213ENST00000568922 DOCK8Q8NF50 2099 aa12.72□□□□□ -0.37
GGA2-213ENST00000568922 TNRC18O15417 2968 aaPredicted RBP12.72□□□□□ -0.37
GGA2-213ENST00000568922 CISD3P0C7P0 127 aa12.72□□□□□ -0.37
GGA2-213ENST00000568922 PAMP19021 973 aa12.72□□□□□ -0.37
GGA2-213ENST00000568922 NR1D1P20393 614 aa12.72□□□□□ -0.37
GGA2-213ENST00000568922 NMBRP28336 390 aa12.72□□□□□ -0.37
GGA2-213ENST00000568922 CTSOP43234 321 aaPredicted RBP12.72□□□□□ -0.37
GGA2-213ENST00000568922 SNRPD1P62314 119 aaKnown RBP12.72□□□□□ -0.37
GGA2-213ENST00000568922 MSLNQ13421 630 aaPredicted RBP12.72□□□□□ -0.37
GGA2-213ENST00000568922 ATXN7L2Q5T6C5 722 aaPredicted RBP12.72□□□□□ -0.37
GGA2-213ENST00000568922 CES3Q6UWW8 571 aa12.72□□□□□ -0.37
GGA2-213ENST00000568922 NLRP9Q7RTR0 991 aa12.72□□□□□ -0.37
GGA2-213ENST00000568922 ETFBKMTQ8IXQ9 262 aa12.72□□□□□ -0.37
GGA2-213ENST00000568922 CPA6Q8N4T0 437 aa12.72□□□□□ -0.37
GGA2-213ENST00000568922 ARFGAP2Q8N6H7 521 aa12.72□□□□□ -0.37
GGA2-213ENST00000568922 MRRFQ96E11 262 aaKnown RBP12.72□□□□□ -0.37
GGA2-213ENST00000568922 MFSD3Q96ES6 412 aa12.72□□□□□ -0.37
GGA2-213ENST00000568922 RPL10LQ96L21 214 aaKnown RBP12.72□□□□□ -0.37
GGA2-213ENST00000568922 NSMCE3Q96MG7 304 aa12.72□□□□□ -0.37
GGA2-213ENST00000568922 ADGRE3Q9BY15 652 aa12.72□□□□□ -0.37
GGA2-213ENST00000568922 TM6SF2Q9BZW4 377 aa12.72□□□□□ -0.37
GGA2-213ENST00000568922 HPS4Q9NQG7 708 aa12.72□□□□□ -0.37
GGA2-213ENST00000568922 SMYD2Q9NRG4 433 aa12.72□□□□□ -0.37
GGA2-213ENST00000568922 COLQQ9Y215 455 aaPredicted RBP12.72□□□□□ -0.37
GGA2-213ENST00000568922 CHKBQ9Y259 395 aa12.72□□□□□ -0.37
GGA2-213ENST00000568922 IQANK1A0A1B0GTG1 560 aa12.72□□□□□ -0.37
GGA2-213ENST00000568922 CXorf49A8MYA2 514 aaPredicted RBP12.72□□□□□ -0.37
GGA2-213ENST00000568922 TULP3O75386 442 aa12.72□□□□□ -0.37
GGA2-213ENST00000568922 ECI2O75521 394 aa12.72□□□□□ -0.37
GGA2-213ENST00000568922 ZNF821O75541 412 aaPredicted RBP12.72□□□□□ -0.37
GGA2-213ENST00000568922 PAPSS2O95340 614 aaPredicted RBP12.72□□□□□ -0.37
GGA2-213ENST00000568922 GSRP00390 522 aa12.72□□□□□ -0.37
GGA2-213ENST00000568922 ASLP04424 464 aa12.72□□□□□ -0.37
GGA2-213ENST00000568922 PSMC3P17980 439 aa12.72□□□□□ -0.37
GGA2-213ENST00000568922 NNMTP40261 264 aa12.72□□□□□ -0.37
GGA2-213ENST00000568922 STK19P49842 368 aaPredicted RBP12.72□□□□□ -0.37
GGA2-213ENST00000568922 VASPP50552 380 aaPredicted RBP12.72□□□□□ -0.37
GGA2-213ENST00000568922 CBX1P83916 185 aa12.72□□□□□ -0.37
GGA2-213ENST00000568922 SEPT6Q14141 434 aa12.72□□□□□ -0.37
GGA2-213ENST00000568922 GALNT3Q14435 633 aa12.72□□□□□ -0.37
GGA2-213ENST00000568922 GEN1Q17RS7 908 aa12.72□□□□□ -0.37
GGA2-213ENST00000568922 LGSNQ5TDP6 509 aa12.72□□□□□ -0.37
GGA2-213ENST00000568922 EMC10Q5UCC4 262 aa12.72□□□□□ -0.37
GGA2-213ENST00000568922 C22orf39Q6P5X5 142 aa12.72□□□□□ -0.37
GGA2-213ENST00000568922 MTSS1LQ765P7 747 aa12.72□□□□□ -0.37
GGA2-213ENST00000568922 MARK2Q7KZI7 788 aaKnown RBP12.72□□□□□ -0.37
GGA2-213ENST00000568922 CYP4X1Q8N118 509 aa12.72□□□□□ -0.37
GGA2-213ENST00000568922 PCDH20Q8N6Y1 951 aaKnown RBP12.72□□□□□ -0.37
GGA2-213ENST00000568922 SMRP1Q8NCR6 262 aa12.72□□□□□ -0.37
GGA2-213ENST00000568922 OR2AP1Q8NGE2 309 aa12.72□□□□□ -0.37
GGA2-213ENST00000568922 GAS2L1Q99501 681 aaPredicted RBP12.72□□□□□ -0.37
GGA2-213ENST00000568922 SENP1Q9P0U3 644 aa12.72□□□□□ -0.37
GGA2-213ENST00000568922 ERVW-1Q9UQF0 538 aa12.72□□□□□ -0.37
GGA2-213ENST00000568922 PCDHGC4Q9Y5F7 938 aa12.72□□□□□ -0.37
GGA2-213ENST00000568922 ACTL7BQ9Y614 415 aa12.72□□□□□ -0.37
GGA2-213ENST00000568922 RRP9O43818 475 aaKnown RBP12.71□□□□□ -0.38
GGA2-213ENST00000568922 PIAS1O75925 651 aa12.71□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms