RNA–Protein interactions for RNA: ENST00000568373.5

SMPD3-211, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

TSL 1 (best) BASIC

Gene SMPD3, Length 2,073 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-211ENST00000568373 TBC1D10AQ9BXI6 508 aa18.3■□□□□ 0.52
SMPD3-211ENST00000568373 STN1Q9H668 368 aaKnown RBP18.3■□□□□ 0.52
SMPD3-211ENST00000568373 BAIAP2L1Q9UHR4 511 aa18.3■□□□□ 0.52
SMPD3-211ENST00000568373 LTBP2Q14767 1821 aa18.3■□□□□ 0.52
SMPD3-211ENST00000568373 CLDN11O75508 207 aa18.29■□□□□ 0.52
SMPD3-211ENST00000568373 CRABP2P29373 138 aa18.29■□□□□ 0.52
SMPD3-211ENST00000568373 RFC2P35250 354 aa18.29■□□□□ 0.52
SMPD3-211ENST00000568373 PGGT1BP53609 377 aa18.29■□□□□ 0.52
SMPD3-211ENST00000568373 PLD1Q13393 1074 aa18.29■□□□□ 0.52
SMPD3-211ENST00000568373 BTG3Q14201 252 aaPredicted RBP18.29■□□□□ 0.52
SMPD3-211ENST00000568373 IL31Q6EBC2 164 aa18.29■□□□□ 0.52
SMPD3-211ENST00000568373 TMCO2Q7Z6W1 182 aaPredicted RBP18.29■□□□□ 0.52
SMPD3-211ENST00000568373 CEP97Q8IW35 865 aa18.29■□□□□ 0.52
SMPD3-211ENST00000568373 CENPLQ8N0S6 344 aaPredicted RBP18.29■□□□□ 0.52
SMPD3-211ENST00000568373 IFT43Q96FT9 208 aa18.29■□□□□ 0.52
SMPD3-211ENST00000568373 FEM1CQ96JP0 617 aa18.29■□□□□ 0.52
SMPD3-211ENST00000568373 ACE2Q9BYF1 805 aaPredicted RBP18.29■□□□□ 0.52
SMPD3-211ENST00000568373 NOD2Q9HC29 1040 aa18.29■□□□□ 0.52
SMPD3-211ENST00000568373 GKN1Q9NS71 199 aa18.29■□□□□ 0.52
SMPD3-211ENST00000568373 CPSF2Q9P2I0 782 aaKnown RBP18.29■□□□□ 0.52
SMPD3-211ENST00000568373 ACOT9Q9Y305 439 aa18.29■□□□□ 0.52
SMPD3-211ENST00000568373 PCDHB12Q9Y5F1 795 aa18.29■□□□□ 0.52
SMPD3-211ENST00000568373 ABHD14A-ACY1A0A1B0GW23 586 aa18.29■□□□□ 0.52
SMPD3-211ENST00000568373 CCDC22O60826 627 aa18.29■□□□□ 0.52
SMPD3-211ENST00000568373 TRIM13O60858 407 aa18.29■□□□□ 0.52
SMPD3-211ENST00000568373 H2AFYO75367 372 aaKnown RBP18.29■□□□□ 0.52
SMPD3-211ENST00000568373 EPOP01588 193 aa18.29■□□□□ 0.52
SMPD3-211ENST00000568373 CALB2P22676 271 aa18.29■□□□□ 0.52
SMPD3-211ENST00000568373 VEPH1Q14D04 833 aa18.29■□□□□ 0.52
SMPD3-211ENST00000568373 FAM117BQ6P1L5 589 aa18.29■□□□□ 0.52
SMPD3-211ENST00000568373 BBS5Q8N3I7 341 aa18.29■□□□□ 0.52
SMPD3-211ENST00000568373 TMEM151AQ8N4L1 468 aa18.29■□□□□ 0.52
SMPD3-211ENST00000568373 DIS3LQ8TF46 1054 aaKnown RBP18.29■□□□□ 0.52
SMPD3-211ENST00000568373 KCTD4Q8WVF5 259 aa18.29■□□□□ 0.52
SMPD3-211ENST00000568373 ELMO2Q96JJ3 720 aa18.29■□□□□ 0.52
SMPD3-211ENST00000568373 RILPQ96NA2 401 aa18.29■□□□□ 0.52
SMPD3-211ENST00000568373 EBF4Q9BQW3 602 aa18.29■□□□□ 0.52
SMPD3-211ENST00000568373 RNF38Q9H0F5 515 aa18.29■□□□□ 0.52
SMPD3-211ENST00000568373 RC3H2Q9HBD1 1191 aaKnown RBP18.29■□□□□ 0.52
SMPD3-211ENST00000568373 ARMCX1Q9P291 453 aa18.29■□□□□ 0.52
SMPD3-211ENST00000568373 ANAPC1Q9H1A4 1944 aa18.28■□□□□ 0.52
SMPD3-211ENST00000568373 PALM2-AKAP2B1ALY0 433 aaPredicted RBP18.28■□□□□ 0.52
SMPD3-211ENST00000568373 TMEM114B3SHH9 223 aa18.28■□□□□ 0.52
SMPD3-211ENST00000568373 TK2O00142 265 aa18.28■□□□□ 0.52
SMPD3-211ENST00000568373 SLC7A4O43246 635 aa18.28■□□□□ 0.52
SMPD3-211ENST00000568373 HLA-DPA1P20036 260 aa18.28■□□□□ 0.52
SMPD3-211ENST00000568373 POU4F1Q01851 419 aa18.28■□□□□ 0.52
SMPD3-211ENST00000568373 RAB33AQ14088 237 aa18.28■□□□□ 0.52
SMPD3-211ENST00000568373 ZYG11AQ6WRX3 759 aa18.28■□□□□ 0.52
SMPD3-211ENST00000568373 NAPRTQ6XQN6 538 aa18.28■□□□□ 0.52
SMPD3-211ENST00000568373 GPATCH11Q8N954 259 aa18.28■□□□□ 0.52
SMPD3-211ENST00000568373 MGME1Q9BQP7 344 aa18.28■□□□□ 0.52
SMPD3-211ENST00000568373 FAM96AQ9H5X1 160 aa18.28■□□□□ 0.52
SMPD3-211ENST00000568373 TLE6Q9H808 572 aa18.28■□□□□ 0.52
SMPD3-211ENST00000568373 OXSMQ9NWU1 459 aa18.28■□□□□ 0.52
SMPD3-211ENST00000568373 SEPT3Q9UH03 358 aa18.28■□□□□ 0.52
SMPD3-211ENST00000568373 RUVBL2Q9Y230 463 aaKnown RBP18.28■□□□□ 0.52
SMPD3-211ENST00000568373 C2orf78A6NCI8 922 aa18.27■□□□□ 0.52
SMPD3-211ENST00000568373 A8MUI8 341 aa18.27■□□□□ 0.52
SMPD3-211ENST00000568373 CAPN14A8MX76 684 aa18.27■□□□□ 0.52
SMPD3-211ENST00000568373 AURKAO14965 403 aa18.27■□□□□ 0.52
SMPD3-211ENST00000568373 LDB2O43679 373 aa18.27■□□□□ 0.52
SMPD3-211ENST00000568373 FGF1P05230 155 aa18.27■□□□□ 0.52
SMPD3-211ENST00000568373 URODP06132 367 aa18.27■□□□□ 0.52
SMPD3-211ENST00000568373 SERPINA6P08185 405 aa18.27■□□□□ 0.52
SMPD3-211ENST00000568373 SERPINF2P08697 491 aa18.27■□□□□ 0.52
SMPD3-211ENST00000568373 ALOX15P16050 662 aaPredicted RBP18.27■□□□□ 0.52
SMPD3-211ENST00000568373 LEPRP48357 1165 aaKnown RBP18.27■□□□□ 0.52
SMPD3-211ENST00000568373 PPP3CCP48454 512 aa18.27■□□□□ 0.52
SMPD3-211ENST00000568373 TAS2R39P59534 338 aa18.27■□□□□ 0.52
SMPD3-211ENST00000568373 DEFB103AP81534 67 aa18.27■□□□□ 0.52
SMPD3-211ENST00000568373 ZNF460Q14592 562 aa18.27■□□□□ 0.52
SMPD3-211ENST00000568373 ADGRF1Q5T601 910 aa18.27■□□□□ 0.52
SMPD3-211ENST00000568373 CNSTQ6PJW8 725 aa18.27■□□□□ 0.52
SMPD3-211ENST00000568373 CHST9Q7L1S5 443 aa18.27■□□□□ 0.52
SMPD3-211ENST00000568373 PSKH2Q96QS6 385 aa18.27■□□□□ 0.52
SMPD3-211ENST00000568373 SPON2Q9BUD6 331 aa18.27■□□□□ 0.52
SMPD3-211ENST00000568373 KLF16Q9BXK1 252 aaPredicted RBP18.27■□□□□ 0.52
SMPD3-211ENST00000568373 PNPOQ9NVS9 261 aa18.27■□□□□ 0.52
SMPD3-211ENST00000568373 AGO1Q9UL18 857 aaKnown RBP18.27■□□□□ 0.52
SMPD3-211ENST00000568373 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP18.27■□□□□ 0.51
SMPD3-211ENST00000568373 A0A1B0GVM2 712 aa18.27■□□□□ 0.51
SMPD3-211ENST00000568373 ILVBLA1L0T0 632 aa18.27■□□□□ 0.51
SMPD3-211ENST00000568373 TCAF2A6NFQ2 919 aa18.27■□□□□ 0.51
SMPD3-211ENST00000568373 PRRG1O14668 218 aa18.27■□□□□ 0.51
SMPD3-211ENST00000568373 KDELR3O43731 214 aa18.27■□□□□ 0.51
SMPD3-211ENST00000568373 CLTBP09497 229 aa18.27■□□□□ 0.51
SMPD3-211ENST00000568373 SBK3P0C264 359 aa18.27■□□□□ 0.51
SMPD3-211ENST00000568373 IRF1P10914 325 aa18.27■□□□□ 0.51
SMPD3-211ENST00000568373 SGSHP51688 502 aa18.27■□□□□ 0.51
SMPD3-211ENST00000568373 OXCT1P55809 520 aa18.27■□□□□ 0.51
SMPD3-211ENST00000568373 TWF1Q12792 350 aa18.27■□□□□ 0.51
SMPD3-211ENST00000568373 GALNT7Q86SF2 657 aa18.27■□□□□ 0.51
SMPD3-211ENST00000568373 LONP2Q86WA8 852 aa18.27■□□□□ 0.51
SMPD3-211ENST00000568373 CILP2Q8IUL8 1156 aa18.27■□□□□ 0.51
SMPD3-211ENST00000568373 MAGEC3Q8TD91 643 aa18.27■□□□□ 0.51
SMPD3-211ENST00000568373 STYXQ8WUJ0 223 aa18.27■□□□□ 0.51
SMPD3-211ENST00000568373 SCYL1Q96KG9 808 aa18.27■□□□□ 0.51
SMPD3-211ENST00000568373 MFSD1Q9H3U5 465 aa18.27■□□□□ 0.51
SMPD3-211ENST00000568373 CAMSAP3Q9P1Y5 1249 aaPredicted RBP18.27■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms