RNA–Protein interactions for RNA: ENST00000568095.5

LINC01541-202, Transcript of long intergenic non-protein coding RNA 1541, humanhuman

TSL 1 (best) BASIC

Gene LINC01541, Length 3,105 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01541-202ENST00000568095 NSMCE3Q96MG7 304 aa5.51□□□□□ -1.53
LINC01541-202ENST00000568095 ZNF347Q96SE7 839 aa5.51□□□□□ -1.53
LINC01541-202ENST00000568095 KIFC3Q9BVG8 833 aa5.51□□□□□ -1.53
LINC01541-202ENST00000568095 FTHL17Q9BXU8 183 aa5.51□□□□□ -1.53
LINC01541-202ENST00000568095 IL22Q9GZX6 179 aa5.51□□□□□ -1.53
LINC01541-202ENST00000568095 DRC3Q9H069 523 aa5.51□□□□□ -1.53
LINC01541-202ENST00000568095 RNPEPQ9H4A4 650 aa5.51□□□□□ -1.53
LINC01541-202ENST00000568095 ZFYVE28Q9HCC9 887 aa5.51□□□□□ -1.53
LINC01541-202ENST00000568095 CD320Q9NPF0 282 aa5.51□□□□□ -1.53
LINC01541-202ENST00000568095 KMT5AQ9NQR1 393 aa5.51□□□□□ -1.53
LINC01541-202ENST00000568095 SMOXQ9NWM0 555 aa5.51□□□□□ -1.53
LINC01541-202ENST00000568095 NXF1Q9UBU9 619 aaKnown RBP5.51□□□□□ -1.53
LINC01541-202ENST00000568095 CYTH4Q9UIA0 394 aa5.51□□□□□ -1.53
LINC01541-202ENST00000568095 ADAM28Q9UKQ2 775 aa5.51□□□□□ -1.53
LINC01541-202ENST00000568095 CNOT6Q9ULM6 557 aaKnown RBP5.51□□□□□ -1.53
LINC01541-202ENST00000568095 TSC22D4Q9Y3Q8 395 aa5.51□□□□□ -1.53
LINC01541-202ENST00000568095 NOX1Q9Y5S8 564 aa5.51□□□□□ -1.53
LINC01541-202ENST00000568095 DYTNA2CJ06 578 aa5.5□□□□□ -1.53
LINC01541-202ENST00000568095 MBLAC1A4D2B0 266 aaPredicted RBP5.5□□□□□ -1.53
LINC01541-202ENST00000568095 STX16-NPEPL1H3BU86 382 aa5.5□□□□□ -1.53
LINC01541-202ENST00000568095 SLC22A1O15245 554 aa5.5□□□□□ -1.53
LINC01541-202ENST00000568095 HDAC3O15379 428 aa5.5□□□□□ -1.53
LINC01541-202ENST00000568095 CLPXO76031 633 aa5.5□□□□□ -1.53
LINC01541-202ENST00000568095 ASS1P00966 412 aaKnown RBP5.5□□□□□ -1.53
LINC01541-202ENST00000568095 ALOX5P09917 674 aa5.5□□□□□ -1.53
LINC01541-202ENST00000568095 KRT3P12035 628 aa5.5□□□□□ -1.53
LINC01541-202ENST00000568095 JAK1P23458 1154 aa5.5□□□□□ -1.53
LINC01541-202ENST00000568095 MIPP30301 263 aa5.5□□□□□ -1.53
LINC01541-202ENST00000568095 GRIA3P42263 894 aa5.5□□□□□ -1.53
LINC01541-202ENST00000568095 CCT8P50990 548 aa5.5□□□□□ -1.53
LINC01541-202ENST00000568095 PRKAA2P54646 552 aa5.5□□□□□ -1.53
LINC01541-202ENST00000568095 POU5F1BQ06416 359 aa5.5□□□□□ -1.53
LINC01541-202ENST00000568095 BNIP3Q12983 259 aa5.5□□□□□ -1.53
LINC01541-202ENST00000568095 GRM1Q13255 1194 aa5.5□□□□□ -1.53
LINC01541-202ENST00000568095 TFDP2Q14188 446 aa5.5□□□□□ -1.53
LINC01541-202ENST00000568095 PTPN20Q4JDL3 420 aa5.5□□□□□ -1.53
LINC01541-202ENST00000568095 XKR9Q5GH70 373 aa5.5□□□□□ -1.53
LINC01541-202ENST00000568095 FAM102BQ5T8I3 360 aa5.5□□□□□ -1.53
LINC01541-202ENST00000568095 FAM160B1Q5W0V3 765 aa5.5□□□□□ -1.53
LINC01541-202ENST00000568095 SCARA3Q6AZY7 606 aa5.5□□□□□ -1.53
LINC01541-202ENST00000568095 GTF2IRD2BQ6EKJ0 949 aa5.5□□□□□ -1.53
LINC01541-202ENST00000568095 CCSAPQ6IQ19 270 aaPredicted RBP5.5□□□□□ -1.53
LINC01541-202ENST00000568095 C16orf87Q6PH81 154 aa5.5□□□□□ -1.53
LINC01541-202ENST00000568095 HACD2Q6Y1H2 254 aa5.5□□□□□ -1.53
LINC01541-202ENST00000568095 TMEM26Q6ZUK4 368 aa5.5□□□□□ -1.53
LINC01541-202ENST00000568095 ERMP1Q7Z2K6 904 aa5.5□□□□□ -1.53
LINC01541-202ENST00000568095 GTF2IRD2Q86UP8 949 aa5.5□□□□□ -1.53
LINC01541-202ENST00000568095 XYLT1Q86Y38 959 aa5.5□□□□□ -1.53
LINC01541-202ENST00000568095 EPHX4Q8IUS5 362 aa5.5□□□□□ -1.53
LINC01541-202ENST00000568095 HERC6Q8IVU3 1022 aa5.5□□□□□ -1.53
LINC01541-202ENST00000568095 PQLC3Q8N755 202 aa5.5□□□□□ -1.53
LINC01541-202ENST00000568095 ATP6V0D2Q8N8Y2 350 aa5.5□□□□□ -1.53
LINC01541-202ENST00000568095 GOLM1Q8NBJ4 401 aa5.5□□□□□ -1.53
LINC01541-202ENST00000568095 ZNF784Q8NCA9 323 aaPredicted RBP5.5□□□□□ -1.53
LINC01541-202ENST00000568095 RNF169Q8NCN4 708 aa5.5□□□□□ -1.53
LINC01541-202ENST00000568095 CHAC2Q8WUX2 184 aa5.5□□□□□ -1.53
LINC01541-202ENST00000568095 TFAP2BQ92481 460 aa5.5□□□□□ -1.53
LINC01541-202ENST00000568095 TRIB2Q92519 343 aa5.5□□□□□ -1.53
LINC01541-202ENST00000568095 MCRS1Q96EZ8 462 aa5.5□□□□□ -1.53
LINC01541-202ENST00000568095 BTN2A3PQ96KV6 586 aa5.5□□□□□ -1.53
LINC01541-202ENST00000568095 CEP170P1Q96L14 293 aa5.5□□□□□ -1.53
LINC01541-202ENST00000568095 SPATA33Q96N06 139 aa5.5□□□□□ -1.53
LINC01541-202ENST00000568095 RNF157Q96PX1 679 aa5.5□□□□□ -1.53
LINC01541-202ENST00000568095 NAA50Q9GZZ1 169 aaKnown RBP5.5□□□□□ -1.53
LINC01541-202ENST00000568095 UNC93B1Q9H1C4 597 aa5.5□□□□□ -1.53
LINC01541-202ENST00000568095 POLR3FQ9H1D9 316 aaPredicted RBP5.5□□□□□ -1.53
LINC01541-202ENST00000568095 PTPRHQ9HD43 1115 aa5.5□□□□□ -1.53
LINC01541-202ENST00000568095 OXSMQ9NWU1 459 aa5.5□□□□□ -1.53
LINC01541-202ENST00000568095 ANKMY1Q9P2S6 941 aa5.5□□□□□ -1.53
LINC01541-202ENST00000568095 SEPT9Q9UHD8 586 aaPredicted RBP5.5□□□□□ -1.53
LINC01541-202ENST00000568095 RAP2CQ9Y3L5 183 aa5.5□□□□□ -1.53
LINC01541-202ENST00000568095 PCDHGB7Q9Y5F8 929 aa5.5□□□□□ -1.53
LINC01541-202ENST00000568095 FNDC1Q4ZHG4 1894 aaPredicted RBP5.5□□□□□ -1.53
LINC01541-202ENST00000568095 COL4A4P53420 1690 aaPredicted RBP5.5□□□□□ -1.53
LINC01541-202ENST00000568095 PALM2-AKAP2B1ALY0 433 aaPredicted RBP5.5□□□□□ -1.53
LINC01541-202ENST00000568095 NOP56O00567 594 aaKnown RBP5.5□□□□□ -1.53
LINC01541-202ENST00000568095 MSCO60682 206 aa5.5□□□□□ -1.53
LINC01541-202ENST00000568095 AOC2O75106 756 aa5.5□□□□□ -1.53
LINC01541-202ENST00000568095 METTL18O95568 372 aa5.5□□□□□ -1.53
LINC01541-202ENST00000568095 GNAO1P09471 354 aa5.5□□□□□ -1.53
LINC01541-202ENST00000568095 NCAM1P13591 858 aa5.5□□□□□ -1.53
LINC01541-202ENST00000568095 NELFEP18615 380 aaKnown RBP5.5□□□□□ -1.53
LINC01541-202ENST00000568095 RPL10P27635 214 aaKnown RBP5.5□□□□□ -1.53
LINC01541-202ENST00000568095 MSX2P35548 267 aaPredicted RBP5.5□□□□□ -1.53
LINC01541-202ENST00000568095 ARCN1P48444 511 aaKnown RBP5.5□□□□□ -1.53
LINC01541-202ENST00000568095 HLCSP50747 726 aa5.5□□□□□ -1.53
LINC01541-202ENST00000568095 RACK1P63244 317 aaKnown RBP5.5□□□□□ -1.53
LINC01541-202ENST00000568095 MERTKQ12866 999 aa5.5□□□□□ -1.53
LINC01541-202ENST00000568095 NOGQ13253 232 aa5.5□□□□□ -1.53
LINC01541-202ENST00000568095 ATP1A4Q13733 1029 aa5.5□□□□□ -1.53
LINC01541-202ENST00000568095 PTK2BQ14289 1009 aa5.5□□□□□ -1.53
LINC01541-202ENST00000568095 DSC3Q14574 896 aa5.5□□□□□ -1.53
LINC01541-202ENST00000568095 SPCS2Q15005 226 aa5.5□□□□□ -1.53
LINC01541-202ENST00000568095 PDK2Q15119 407 aa5.5□□□□□ -1.53
LINC01541-202ENST00000568095 ATP6AP1Q15904 470 aa5.5□□□□□ -1.53
LINC01541-202ENST00000568095 DGKDQ16760 1214 aa5.5□□□□□ -1.53
LINC01541-202ENST00000568095 FAM187BQ17R55 369 aa5.5□□□□□ -1.53
LINC01541-202ENST00000568095 CYP4A22Q5TCH4 519 aa5.5□□□□□ -1.53
LINC01541-202ENST00000568095 GPR107Q5VW38 600 aa5.5□□□□□ -1.53
LINC01541-202ENST00000568095 NANOGNBQ7Z5D8 188 aa5.5□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 77.4 ms