RNA–Protein interactions for RNA: ENST00000567258.1

LINC00564-201, long intergenic non-protein coding RNA 564, humanhuman

BASIC

Gene LINC00564, Length 1,119 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00564-201ENST00000567258 NCAPGQ9BPX3 1015 aa10.53□□□□□ -0.72
LINC00564-201ENST00000567258 BPIFA3Q9BQP9 254 aa10.53□□□□□ -0.72
LINC00564-201ENST00000567258 C1QTNF7Q9BXJ2 289 aa10.53□□□□□ -0.72
LINC00564-201ENST00000567258 SLC17A9Q9BYT1 436 aa10.53□□□□□ -0.72
LINC00564-201ENST00000567258 RAB6CQ9H0N0 254 aa10.53□□□□□ -0.72
LINC00564-201ENST00000567258 ZNF212Q9UDV6 495 aa10.53□□□□□ -0.72
LINC00564-201ENST00000567258 HS3ST3A1Q9Y663 406 aa10.53□□□□□ -0.72
LINC00564-201ENST00000567258 ACACAQ13085 2346 aa10.52□□□□□ -0.72
LINC00564-201ENST00000567258 SHROOM3Q8TF72 1996 aa10.52□□□□□ -0.72
LINC00564-201ENST00000567258 CFAP47Q6ZTR5 3102 aa10.52□□□□□ -0.72
LINC00564-201ENST00000567258 LRRK1Q38SD2 2015 aa10.52□□□□□ -0.73
LINC00564-201ENST00000567258 C16orf96A6NNT2 1141 aa10.52□□□□□ -0.73
LINC00564-201ENST00000567258 AP1G1O43747 822 aa10.52□□□□□ -0.73
LINC00564-201ENST00000567258 SDC3O75056 442 aa10.52□□□□□ -0.73
LINC00564-201ENST00000567258 PAK4O96013 591 aaPredicted RBP10.52□□□□□ -0.73
LINC00564-201ENST00000567258 UGT2B4P06133 528 aa10.52□□□□□ -0.73
LINC00564-201ENST00000567258 ATP1A3P13637 1013 aa10.52□□□□□ -0.73
LINC00564-201ENST00000567258 CKMT2P17540 419 aa10.52□□□□□ -0.73
LINC00564-201ENST00000567258 PSMA2P25787 234 aa10.52□□□□□ -0.73
LINC00564-201ENST00000567258 HTR7P34969 479 aa10.52□□□□□ -0.73
LINC00564-201ENST00000567258 ZNF165P49910 485 aa10.52□□□□□ -0.73
LINC00564-201ENST00000567258 RHOAP61586 193 aa10.52□□□□□ -0.73
LINC00564-201ENST00000567258 DNAJC3Q13217 504 aa10.52□□□□□ -0.73
LINC00564-201ENST00000567258 ILKQ13418 452 aa10.52□□□□□ -0.73
LINC00564-201ENST00000567258 GRM3Q14832 879 aa10.52□□□□□ -0.73
LINC00564-201ENST00000567258 NCAPHQ15003 741 aa10.52□□□□□ -0.73
LINC00564-201ENST00000567258 MYLK3Q32MK0 819 aa10.52□□□□□ -0.73
LINC00564-201ENST00000567258 PARP15Q460N3 678 aa10.52□□□□□ -0.73
LINC00564-201ENST00000567258 CFAP58Q5T655 872 aa10.52□□□□□ -0.73
LINC00564-201ENST00000567258 CAVIN1Q6NZI2 390 aaKnown RBP10.52□□□□□ -0.73
LINC00564-201ENST00000567258 LEKR1Q6ZMV7 388 aa10.52□□□□□ -0.73
LINC00564-201ENST00000567258 TMC6Q7Z403 805 aa10.52□□□□□ -0.73
LINC00564-201ENST00000567258 TTC7BQ86TV6 843 aa10.52□□□□□ -0.73
LINC00564-201ENST00000567258 PROSER1Q86XN7 944 aa10.52□□□□□ -0.73
LINC00564-201ENST00000567258 SPATS2Q86XZ4 545 aaKnown RBP10.52□□□□□ -0.73
LINC00564-201ENST00000567258 OR6K2Q8NGY2 324 aa10.52□□□□□ -0.73
LINC00564-201ENST00000567258 TRIM11Q96F44 468 aa10.52□□□□□ -0.73
LINC00564-201ENST00000567258 FZD3Q9NPG1 666 aa10.52□□□□□ -0.73
LINC00564-201ENST00000567258 NDFIP2Q9NV92 336 aa10.52□□□□□ -0.73
LINC00564-201ENST00000567258 KLHL11Q9NVR0 708 aa10.52□□□□□ -0.73
LINC00564-201ENST00000567258 DNAJC28Q9NX36 388 aa10.52□□□□□ -0.73
LINC00564-201ENST00000567258 FZD10Q9ULW2 581 aa10.52□□□□□ -0.73
LINC00564-201ENST00000567258 CA5BQ9Y2D0 317 aa10.52□□□□□ -0.73
LINC00564-201ENST00000567258 FADS3Q9Y5Q0 445 aa10.52□□□□□ -0.73
LINC00564-201ENST00000567258 DNMT3AQ9Y6K1 912 aaPredicted RBP10.52□□□□□ -0.73
LINC00564-201ENST00000567258 SPEGQ15772 3267 aa10.52□□□□□ -0.73
LINC00564-201ENST00000567258 ADAMTS20P59510 1910 aa10.52□□□□□ -0.73
LINC00564-201ENST00000567258 FAM149AA5PLN7 773 aa10.51□□□□□ -0.73
LINC00564-201ENST00000567258 TRABD2BA6NFA1 517 aa10.51□□□□□ -0.73
LINC00564-201ENST00000567258 ARHGAP42A6NI28 874 aa10.51□□□□□ -0.73
LINC00564-201ENST00000567258 LRRC53A6NM62 1247 aa10.51□□□□□ -0.73
LINC00564-201ENST00000567258 EIF3CLB5ME19 914 aaKnown RBP10.51□□□□□ -0.73
LINC00564-201ENST00000567258 C10orf142B7Z368 130 aa10.51□□□□□ -0.73
LINC00564-201ENST00000567258 PRPSAP2O60256 369 aa10.51□□□□□ -0.73
LINC00564-201ENST00000567258 ZNF821O75541 412 aaPredicted RBP10.51□□□□□ -0.73
LINC00564-201ENST00000567258 TMCC1O94876 653 aa10.51□□□□□ -0.73
LINC00564-201ENST00000567258 DKK1O94907 266 aa10.51□□□□□ -0.73
LINC00564-201ENST00000567258 RABIFP47224 123 aa10.51□□□□□ -0.73
LINC00564-201ENST00000567258 DUSP3P51452 185 aaPredicted RBP10.51□□□□□ -0.73
LINC00564-201ENST00000567258 THOP1P52888 689 aa10.51□□□□□ -0.73
LINC00564-201ENST00000567258 CLDN2P57739 230 aa10.51□□□□□ -0.73
LINC00564-201ENST00000567258 HNRNPKP61978 463 aaKnown RBP eCLIP10.51□□□□□ -0.73
LINC00564-201ENST00000567258 RPL7AP62424 266 aaKnown RBP10.51□□□□□ -0.73
LINC00564-201ENST00000567258 KLHL30Q0D2K2 578 aa10.51□□□□□ -0.73
LINC00564-201ENST00000567258 CBLBQ13191 982 aa10.51□□□□□ -0.73
LINC00564-201ENST00000567258 PTK2BQ14289 1009 aa10.51□□□□□ -0.73
LINC00564-201ENST00000567258 SHBQ15464 509 aa10.51□□□□□ -0.73
LINC00564-201ENST00000567258 SMAD1Q15797 465 aaKnown RBP10.51□□□□□ -0.73
LINC00564-201ENST00000567258 INO80DQ53TQ3 878 aaPredicted RBP10.51□□□□□ -0.73
LINC00564-201ENST00000567258 SEL1L3Q68CR1 1132 aa10.51□□□□□ -0.73
LINC00564-201ENST00000567258 GDPD4Q6W3E5 623 aa10.51□□□□□ -0.73
LINC00564-201ENST00000567258 Q6ZSR6 202 aa10.51□□□□□ -0.73
LINC00564-201ENST00000567258 PARS2Q7L3T8 475 aaKnown RBP10.51□□□□□ -0.73
LINC00564-201ENST00000567258 VPS36Q86VN1 386 aa10.51□□□□□ -0.73
LINC00564-201ENST00000567258 PYROXD2Q8N2H3 581 aa10.51□□□□□ -0.73
LINC00564-201ENST00000567258 TMEM145Q8NBT3 493 aa10.51□□□□□ -0.73
LINC00564-201ENST00000567258 OR13H1Q8NG92 308 aa10.51□□□□□ -0.73
LINC00564-201ENST00000567258 MDM1Q8TC05 714 aa10.51□□□□□ -0.73
LINC00564-201ENST00000567258 CXorf40AQ8TE69 158 aa10.51□□□□□ -0.73
LINC00564-201ENST00000567258 IFT43Q96FT9 208 aa10.51□□□□□ -0.73
LINC00564-201ENST00000567258 KLHL32Q96NJ5 620 aa10.51□□□□□ -0.73
LINC00564-201ENST00000567258 EIF3CQ99613 913 aaKnown RBP10.51□□□□□ -0.73
LINC00564-201ENST00000567258 TTYH3Q9C0H2 523 aa10.51□□□□□ -0.73
LINC00564-201ENST00000567258 MRPL47Q9HD33 250 aaKnown RBP10.51□□□□□ -0.73
LINC00564-201ENST00000567258 TMEM63CQ9P1W3 806 aa10.51□□□□□ -0.73
LINC00564-201ENST00000567258 UBA2Q9UBT2 640 aaPredicted RBP10.51□□□□□ -0.73
LINC00564-201ENST00000567258 ZFR2Q9UPR6 939 aaKnown RBP10.51□□□□□ -0.73
LINC00564-201ENST00000567258 ACTL7AQ9Y615 435 aa10.51□□□□□ -0.73
LINC00564-201ENST00000567258 SCINQ9Y6U3 715 aa10.51□□□□□ -0.73
LINC00564-201ENST00000567258 ANKRD11Q6UB99 2663 aaPredicted RBP10.51□□□□□ -0.73
LINC00564-201ENST00000567258 FAM208BQ5VWN6 2430 aa10.5□□□□□ -0.73
LINC00564-201ENST00000567258 A0A1W2PQC6 194 aa10.5□□□□□ -0.73
LINC00564-201ENST00000567258 IGLON5A6NGN9 336 aa10.5□□□□□ -0.73
LINC00564-201ENST00000567258 RASA4BC9J798 803 aa10.5□□□□□ -0.73
LINC00564-201ENST00000567258 EEF2KO00418 725 aaKnown RBP10.5□□□□□ -0.73
LINC00564-201ENST00000567258 FFAR2O15552 330 aa10.5□□□□□ -0.73
LINC00564-201ENST00000567258 ZZEF1O43149 2961 aa10.5□□□□□ -0.73
LINC00564-201ENST00000567258 TEX33O43247 280 aa10.5□□□□□ -0.73
LINC00564-201ENST00000567258 RASA4O43374 803 aa10.5□□□□□ -0.73
LINC00564-201ENST00000567258 GZMAP12544 262 aa10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms