RNA–Protein interactions for RNA: ENST00000565936.1

LINC01043-201, Transcript of long intergenic non-protein coding RNA 1043, humanhuman

TSL 1 (best) BASIC

Gene LINC01043, Length 6,897 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01043-201ENST00000565936 MIER2Q8N344 545 aa6.57□□□□□ -1.36
LINC01043-201ENST00000565936 CCDC185Q8N715 623 aa6.57□□□□□ -1.36
LINC01043-201ENST00000565936 SRFBP1Q8NEF9 429 aaKnown RBP6.57□□□□□ -1.36
LINC01043-201ENST00000565936 RDH11Q8TC12 318 aa6.57□□□□□ -1.36
LINC01043-201ENST00000565936 BRSK1Q8TDC3 778 aa6.57□□□□□ -1.36
LINC01043-201ENST00000565936 SELENOMQ8WWX9 145 aa6.57□□□□□ -1.36
LINC01043-201ENST00000565936 IRF7Q92985 503 aa6.57□□□□□ -1.36
LINC01043-201ENST00000565936 SEC16BQ96JE7 1060 aa6.57□□□□□ -1.36
LINC01043-201ENST00000565936 IL12RB2Q99665 862 aa6.57□□□□□ -1.36
LINC01043-201ENST00000565936 ZNF711Q9Y462 761 aa6.57□□□□□ -1.36
LINC01043-201ENST00000565936 GLYATL1P3A0A0U1RQE8 302 aa6.56□□□□□ -1.36
LINC01043-201ENST00000565936 HSFX4A0A1B0GTS1 333 aaPredicted RBP6.56□□□□□ -1.36
LINC01043-201ENST00000565936 HSFX3A0A1B0GWH4 333 aaPredicted RBP6.56□□□□□ -1.36
LINC01043-201ENST00000565936 CD3EAPO15446 510 aaKnown RBP6.56□□□□□ -1.36
LINC01043-201ENST00000565936 OR6A2O95222 327 aa6.56□□□□□ -1.36
LINC01043-201ENST00000565936 S100A3P33764 101 aa6.56□□□□□ -1.36
LINC01043-201ENST00000565936 GPD2P43304 727 aa6.56□□□□□ -1.36
LINC01043-201ENST00000565936 KCNMA1Q12791 1236 aa6.56□□□□□ -1.36
LINC01043-201ENST00000565936 SHCBP1LQ9BZQ2 653 aa6.56□□□□□ -1.36
LINC01043-201ENST00000565936 POMKQ9H5K3 350 aa6.56□□□□□ -1.36
LINC01043-201ENST00000565936 ELAC1Q9H777 363 aaKnown RBP6.56□□□□□ -1.36
LINC01043-201ENST00000565936 TMBIM4Q9HC24 238 aa6.56□□□□□ -1.36
LINC01043-201ENST00000565936 PCYOX1Q9UHG3 505 aa6.56□□□□□ -1.36
LINC01043-201ENST00000565936 TMEM191CA6NGB0 347 aa6.56□□□□□ -1.36
LINC01043-201ENST00000565936 MDM4O15151 490 aa6.56□□□□□ -1.36
LINC01043-201ENST00000565936 OTCP00480 354 aa6.56□□□□□ -1.36
LINC01043-201ENST00000565936 MC4RP32245 332 aa6.56□□□□□ -1.36
LINC01043-201ENST00000565936 LSP1P33241 339 aa6.56□□□□□ -1.36
LINC01043-201ENST00000565936 PBX3P40426 434 aa6.56□□□□□ -1.36
LINC01043-201ENST00000565936 SLC16A1P53985 500 aa6.56□□□□□ -1.36
LINC01043-201ENST00000565936 WNT3AP56704 352 aa6.56□□□□□ -1.36
LINC01043-201ENST00000565936 KHDRBS1Q07666 443 aaKnown RBP eCLIP6.56□□□□□ -1.36
LINC01043-201ENST00000565936 SPIRE1Q08AE8 756 aa6.56□□□□□ -1.36
LINC01043-201ENST00000565936 TMED1Q13445 227 aa6.56□□□□□ -1.36
LINC01043-201ENST00000565936 PTPRNQ16849 979 aa6.56□□□□□ -1.36
LINC01043-201ENST00000565936 SLC10A6Q3KNW5 377 aa6.56□□□□□ -1.36
LINC01043-201ENST00000565936 PRSS55Q6UWB4 352 aaPredicted RBP6.56□□□□□ -1.36
LINC01043-201ENST00000565936 BNC2Q6ZN30 1099 aaPredicted RBP6.56□□□□□ -1.36
LINC01043-201ENST00000565936 CHSY3Q70JA7 882 aa6.56□□□□□ -1.36
LINC01043-201ENST00000565936 GLIS3Q8NEA6 775 aa6.56□□□□□ -1.36
LINC01043-201ENST00000565936 ZNF398Q8TD17 642 aa6.56□□□□□ -1.36
LINC01043-201ENST00000565936 STYXQ8WUJ0 223 aa6.56□□□□□ -1.36
LINC01043-201ENST00000565936 PPP3R2Q96LZ3 170 aa6.56□□□□□ -1.36
LINC01043-201ENST00000565936 ZMAT2Q96NC0 199 aaKnown RBP6.56□□□□□ -1.36
LINC01043-201ENST00000565936 PCDH18Q9HCL0 1135 aa6.56□□□□□ -1.36
LINC01043-201ENST00000565936 CNTN3Q9P232 1028 aa6.56□□□□□ -1.36
LINC01043-201ENST00000565936 ABI3Q9P2A4 366 aa6.56□□□□□ -1.36
LINC01043-201ENST00000565936 CCDC154A6NI56 674 aa6.56□□□□□ -1.36
LINC01043-201ENST00000565936 CYP7B1O75881 506 aa6.56□□□□□ -1.36
LINC01043-201ENST00000565936 DGKIO75912 1065 aa6.56□□□□□ -1.36
LINC01043-201ENST00000565936 USP1O94782 785 aa6.56□□□□□ -1.36
LINC01043-201ENST00000565936 GJB6O95452 261 aa6.56□□□□□ -1.36
LINC01043-201ENST00000565936 EIF2S1P05198 315 aaKnown RBP6.56□□□□□ -1.36
LINC01043-201ENST00000565936 ALADP13716 330 aa6.56□□□□□ -1.36
LINC01043-201ENST00000565936 ITIH4Q14624 930 aa6.56□□□□□ -1.36
LINC01043-201ENST00000565936 CYP4X1Q8N118 509 aa6.56□□□□□ -1.36
LINC01043-201ENST00000565936 CFAP52Q8N1V2 620 aa6.56□□□□□ -1.36
LINC01043-201ENST00000565936 TTC29Q8NA56 475 aaPredicted RBP6.56□□□□□ -1.36
LINC01043-201ENST00000565936 ACTRT2Q8TDY3 377 aa6.56□□□□□ -1.36
LINC01043-201ENST00000565936 C7orf43Q8WVR3 580 aa6.56□□□□□ -1.36
LINC01043-201ENST00000565936 CLP1Q92989 425 aaKnown RBP6.56□□□□□ -1.36
LINC01043-201ENST00000565936 VMP1Q96GC9 406 aa6.56□□□□□ -1.36
LINC01043-201ENST00000565936 MAGED4Q96JG8 741 aa6.56□□□□□ -1.36
LINC01043-201ENST00000565936 PRICKLE1Q96MT3 831 aaPredicted RBP6.56□□□□□ -1.36
LINC01043-201ENST00000565936 OSBPL6Q9BZF3 934 aa6.56□□□□□ -1.36
LINC01043-201ENST00000565936 LRRC19Q9H756 370 aa6.56□□□□□ -1.36
LINC01043-201ENST00000565936 AGO3Q9H9G7 860 aaKnown RBP6.56□□□□□ -1.36
LINC01043-201ENST00000565936 SAGE1Q9NXZ1 904 aa6.56□□□□□ -1.36
LINC01043-201ENST00000565936 L1RE1Q9UN81 338 aa6.56□□□□□ -1.36
LINC01043-201ENST00000565936 ZFP37Q9Y6Q3 630 aaPredicted RBP6.56□□□□□ -1.36
LINC01043-201ENST00000565936 CTPS1P17812 591 aa6.56□□□□□ -1.36
LINC01043-201ENST00000565936 SCNN1AP37088 669 aa6.56□□□□□ -1.36
LINC01043-201ENST00000565936 VEGFBP49765 207 aa6.56□□□□□ -1.36
LINC01043-201ENST00000565936 CACNG1Q06432 222 aa6.56□□□□□ -1.36
LINC01043-201ENST00000565936 RUNX1T1Q06455 604 aa6.56□□□□□ -1.36
LINC01043-201ENST00000565936 IL10RBQ08334 325 aa6.56□□□□□ -1.36
LINC01043-201ENST00000565936 SMYD5Q6GMV2 418 aa6.56□□□□□ -1.36
LINC01043-201ENST00000565936 CAPN13Q6MZZ7 669 aaPredicted RBP6.56□□□□□ -1.36
LINC01043-201ENST00000565936 MAMDC4Q6UXC1 1216 aa6.56□□□□□ -1.36
LINC01043-201ENST00000565936 DNAJB7Q7Z6W7 309 aaPredicted RBP6.56□□□□□ -1.36
LINC01043-201ENST00000565936 CMTR2Q8IYT2 770 aaKnown RBP6.56□□□□□ -1.36
LINC01043-201ENST00000565936 LNX1Q8TBB1 728 aaPredicted RBP6.56□□□□□ -1.36
LINC01043-201ENST00000565936 OVCA2Q8WZ82 227 aa6.56□□□□□ -1.36
LINC01043-201ENST00000565936 NECTIN4Q96NY8 510 aa6.56□□□□□ -1.36
LINC01043-201ENST00000565936 CEP44Q9C0F1 390 aa6.56□□□□□ -1.36
LINC01043-201ENST00000565936 TCF7L2Q9NQB0 619 aa6.56□□□□□ -1.36
LINC01043-201ENST00000565936 FNIP2Q9P278 1114 aa6.56□□□□□ -1.36
LINC01043-201ENST00000565936 TLR6Q9Y2C9 796 aa6.56□□□□□ -1.36
LINC01043-201ENST00000565936 NDUFAF1Q9Y375 327 aa6.56□□□□□ -1.36
LINC01043-201ENST00000565936 YIPF1Q9Y548 306 aa6.56□□□□□ -1.36
LINC01043-201ENST00000565936 RAI2Q9Y5P3 530 aa6.56□□□□□ -1.36
LINC01043-201ENST00000565936 GRIN2DO15399 1336 aa6.56□□□□□ -1.36
LINC01043-201ENST00000565936 LOC100653049A0A140TA62 436 aa6.56□□□□□ -1.36
LINC01043-201ENST00000565936 SCAMP3O14828 347 aaKnown RBP6.56□□□□□ -1.36
LINC01043-201ENST00000565936 RPP40O75818 363 aaKnown RBP6.56□□□□□ -1.36
LINC01043-201ENST00000565936 KRT34O76011 436 aa6.56□□□□□ -1.36
LINC01043-201ENST00000565936 UGT2B4P06133 528 aa6.56□□□□□ -1.36
LINC01043-201ENST00000565936 TCF3P15923 654 aa6.56□□□□□ -1.36
LINC01043-201ENST00000565936 SERPINB5P36952 375 aa6.56□□□□□ -1.36
LINC01043-201ENST00000565936 RPL21P46778 160 aaKnown RBP6.56□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms