RNA–Protein interactions for RNA: ENST00000565810.1

CDH1-208, Transcript of cadherin 1, humanhuman

TSL 3

Gene CDH1, Length 282 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-208ENST00000565810 LRRC40Q9H9A6 602 aa7.87□□□□□ -1.15
CDH1-208ENST00000565810 PRSS16Q9NQE7 514 aa7.87□□□□□ -1.15
CDH1-208ENST00000565810 FAM114A2Q9NRY5 505 aa7.87□□□□□ -1.15
CDH1-208ENST00000565810 UBP1Q9NZI7 540 aa7.87□□□□□ -1.15
CDH1-208ENST00000565810 ANAPC5Q9UJX4 755 aa7.87□□□□□ -1.15
CDH1-208ENST00000565810 SNX24Q9Y343 169 aa7.87□□□□□ -1.15
CDH1-208ENST00000565810 PCDHGC4Q9Y5F7 938 aa7.87□□□□□ -1.15
CDH1-208ENST00000565810 ANTXRLA6NF34 631 aa7.86□□□□□ -1.15
CDH1-208ENST00000565810 KPNA3O00505 521 aaPredicted RBP7.86□□□□□ -1.15
CDH1-208ENST00000565810 LEFTY1O75610 366 aa7.86□□□□□ -1.15
CDH1-208ENST00000565810 PIGNO95427 931 aa7.86□□□□□ -1.15
CDH1-208ENST00000565810 AP2A1O95782 977 aa7.86□□□□□ -1.15
CDH1-208ENST00000565810 ADH1BP00325 375 aa7.86□□□□□ -1.15
CDH1-208ENST00000565810 DNTTP04053 509 aa7.86□□□□□ -1.15
CDH1-208ENST00000565810 UGT2B4P06133 528 aa7.86□□□□□ -1.15
CDH1-208ENST00000565810 DCNP07585 359 aaKnown RBP7.86□□□□□ -1.15
CDH1-208ENST00000565810 MMP2P08253 660 aa7.86□□□□□ -1.15
CDH1-208ENST00000565810 HLA-DPA1P20036 260 aa7.86□□□□□ -1.15
CDH1-208ENST00000565810 C5AR1P21730 350 aa7.86□□□□□ -1.15
CDH1-208ENST00000565810 GKP32189 559 aa7.86□□□□□ -1.15
CDH1-208ENST00000565810 PSMD8P48556 350 aa7.86□□□□□ -1.15
CDH1-208ENST00000565810 CLCN5P51795 746 aa7.86□□□□□ -1.15
CDH1-208ENST00000565810 RPL26P61254 145 aaKnown RBP7.86□□□□□ -1.15
CDH1-208ENST00000565810 SATB1Q01826 763 aa7.86□□□□□ -1.15
CDH1-208ENST00000565810 CAV1Q03135 178 aa7.86□□□□□ -1.15
CDH1-208ENST00000565810 ZBTB16Q05516 673 aa7.86□□□□□ -1.15
CDH1-208ENST00000565810 FZD5Q13467 585 aa7.86□□□□□ -1.15
CDH1-208ENST00000565810 MORF4L2Q15014 288 aa7.86□□□□□ -1.15
CDH1-208ENST00000565810 TTC31Q49AM3 519 aaPredicted RBP7.86□□□□□ -1.15
CDH1-208ENST00000565810 ZNF805Q5CZA5 627 aa7.86□□□□□ -1.15
CDH1-208ENST00000565810 IZUMO3Q5VZ72 239 aa7.86□□□□□ -1.15
CDH1-208ENST00000565810 ZNF776Q68DI1 518 aaPredicted RBP7.86□□□□□ -1.15
CDH1-208ENST00000565810 DUPD1Q68J44 220 aa7.86□□□□□ -1.15
CDH1-208ENST00000565810 BRAT1Q6PJG6 821 aa7.86□□□□□ -1.15
CDH1-208ENST00000565810 HOOK3Q86VS8 718 aa7.86□□□□□ -1.15
CDH1-208ENST00000565810 TMPRSS6Q8IU80 811 aa7.86□□□□□ -1.15
CDH1-208ENST00000565810 CAMK1DQ8IU85 385 aa7.86□□□□□ -1.15
CDH1-208ENST00000565810 PGBD3Q8N328 593 aa7.86□□□□□ -1.15
CDH1-208ENST00000565810 SPEM1Q8N4L4 309 aa7.86□□□□□ -1.15
CDH1-208ENST00000565810 PDCD7Q8N8D1 485 aaKnown RBP7.86□□□□□ -1.15
CDH1-208ENST00000565810 DNAAF3Q8N9W5 541 aa7.86□□□□□ -1.15
CDH1-208ENST00000565810 TSTD1Q8NFU3 115 aa7.86□□□□□ -1.15
CDH1-208ENST00000565810 PIP4K2CQ8TBX8 421 aa7.86□□□□□ -1.15
CDH1-208ENST00000565810 GRIN3AQ8TCU5 1115 aa7.86□□□□□ -1.15
CDH1-208ENST00000565810 GANCQ8TET4 914 aa7.86□□□□□ -1.15
CDH1-208ENST00000565810 IFT81Q8WYA0 676 aa7.86□□□□□ -1.15
CDH1-208ENST00000565810 CPT1BQ92523 772 aa7.86□□□□□ -1.15
CDH1-208ENST00000565810 PRCCQ92733 491 aaPredicted RBP7.86□□□□□ -1.15
CDH1-208ENST00000565810 PBXIP1Q96AQ6 731 aa7.86□□□□□ -1.15
CDH1-208ENST00000565810 TADA1Q96BN2 335 aa7.86□□□□□ -1.15
CDH1-208ENST00000565810 RMDN1Q96DB5 314 aa7.86□□□□□ -1.15
CDH1-208ENST00000565810 SIPA1Q96FS4 1042 aa7.86□□□□□ -1.15
CDH1-208ENST00000565810 OXNAD1Q96HP4 312 aaPredicted RBP7.86□□□□□ -1.15
CDH1-208ENST00000565810 ZNF419Q96HQ0 510 aaPredicted RBP7.86□□□□□ -1.15
CDH1-208ENST00000565810 FEM1CQ96JP0 617 aa7.86□□□□□ -1.15
CDH1-208ENST00000565810 MRGPRX2Q96LB1 330 aa7.86□□□□□ -1.15
CDH1-208ENST00000565810 KLHL32Q96NJ5 620 aa7.86□□□□□ -1.15
CDH1-208ENST00000565810 SRPK1Q96SB4 655 aaKnown RBP7.86□□□□□ -1.15
CDH1-208ENST00000565810 FAM129BQ96TA1 746 aa7.86□□□□□ -1.15
CDH1-208ENST00000565810 TBL1YQ9BQ87 522 aa7.86□□□□□ -1.15
CDH1-208ENST00000565810 FICDQ9BVA6 458 aa7.86□□□□□ -1.15
CDH1-208ENST00000565810 TDRD1Q9BXT4 1180 aaKnown RBP7.86□□□□□ -1.15
CDH1-208ENST00000565810 FRMD8Q9BZ67 464 aaPredicted RBP7.86□□□□□ -1.15
CDH1-208ENST00000565810 RSPH9Q9H1X1 276 aaPredicted RBP7.86□□□□□ -1.15
CDH1-208ENST00000565810 EPB41L5Q9HCM4 733 aa7.86□□□□□ -1.15
CDH1-208ENST00000565810 EIF2B3Q9NR50 452 aaKnown RBP7.86□□□□□ -1.15
CDH1-208ENST00000565810 WHRNQ9P202 907 aa7.86□□□□□ -1.15
CDH1-208ENST00000565810 BCCIPQ9P287 314 aaKnown RBP eCLIP7.86□□□□□ -1.15
CDH1-208ENST00000565810 DKK3Q9UBP4 350 aa7.86□□□□□ -1.15
CDH1-208ENST00000565810 PPM1HQ9ULR3 514 aa7.86□□□□□ -1.15
CDH1-208ENST00000565810 PHTF1Q9UMS5 762 aa7.86□□□□□ -1.15
CDH1-208ENST00000565810 SCML1Q9UN30 329 aa7.86□□□□□ -1.15
CDH1-208ENST00000565810 RPL26L1Q9UNX3 145 aaKnown RBP7.86□□□□□ -1.15
CDH1-208ENST00000565810 CHKBQ9Y259 395 aa7.86□□□□□ -1.15
CDH1-208ENST00000565810 NCKAP1Q9Y2A7 1128 aa7.86□□□□□ -1.15
CDH1-208ENST00000565810 PCDHB9Q9Y5E1 797 aa7.86□□□□□ -1.15
CDH1-208ENST00000565810 WASF2Q9Y6W5 498 aa7.86□□□□□ -1.15
CDH1-208ENST00000565810 F5P12259 2224 aa7.85□□□□□ -1.15
CDH1-208ENST00000565810 LOC285095A0A1B0GVY8 99 aa7.85□□□□□ -1.15
CDH1-208ENST00000565810 A0A1W2PQF6 199 aa7.85□□□□□ -1.15
CDH1-208ENST00000565810 TCRBV21S2A2A0A5A6 115 aa7.85□□□□□ -1.15
CDH1-208ENST00000565810 HTRA2O43464 458 aaPredicted RBP7.85□□□□□ -1.15
CDH1-208ENST00000565810 GJB3O75712 270 aa7.85□□□□□ -1.15
CDH1-208ENST00000565810 SUN1O94901 812 aa7.85□□□□□ -1.15
CDH1-208ENST00000565810 SEC31AO94979 1220 aaKnown RBP7.85□□□□□ -1.15
CDH1-208ENST00000565810 PGLSO95336 258 aa7.85□□□□□ -1.15
CDH1-208ENST00000565810 APBB3O95704 486 aa7.85□□□□□ -1.15
CDH1-208ENST00000565810 NDST3O95803 873 aa7.85□□□□□ -1.15
CDH1-208ENST00000565810 CPP00450 1065 aa7.85□□□□□ -1.15
CDH1-208ENST00000565810 FGF1P05230 155 aa7.85□□□□□ -1.15
CDH1-208ENST00000565810 TUBBP07437 444 aa7.85□□□□□ -1.15
CDH1-208ENST00000565810 CTSLP07711 333 aa7.85□□□□□ -1.15
CDH1-208ENST00000565810 CHRM1P11229 460 aaPredicted RBP7.85□□□□□ -1.15
CDH1-208ENST00000565810 AOC1P19801 751 aa7.85□□□□□ -1.15
CDH1-208ENST00000565810 COL9A1P20849 921 aa7.85□□□□□ -1.15
CDH1-208ENST00000565810 MCM3P25205 808 aa7.85□□□□□ -1.15
CDH1-208ENST00000565810 SLC8A1P32418 973 aa7.85□□□□□ -1.15
CDH1-208ENST00000565810 MAGEA6P43360 314 aa7.85□□□□□ -1.15
CDH1-208ENST00000565810 RPL21P46778 160 aaKnown RBP7.85□□□□□ -1.15
CDH1-208ENST00000565810 CXCL12P48061 93 aa7.85□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms