RNA–Protein interactions for RNA: ENST00000564791.5

SNX29-204, Transcript of sorting nexin 29, humanhuman

TSL 1 (best)

Gene SNX29, Length 1,633 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX29-204ENST00000564791 HLA-DPA1P20036 260 aa11.36□□□□□ -0.59
SNX29-204ENST00000564791 ECT2LQ008S8 904 aa11.36□□□□□ -0.59
SNX29-204ENST00000564791 SULT2A1Q06520 285 aa11.36□□□□□ -0.59
SNX29-204ENST00000564791 TRAF2Q12933 501 aa11.36□□□□□ -0.59
SNX29-204ENST00000564791 SEPT6Q14141 434 aa11.36□□□□□ -0.59
SNX29-204ENST00000564791 TMED2Q15363 201 aa11.36□□□□□ -0.59
SNX29-204ENST00000564791 SMAD1Q15797 465 aaKnown RBP11.36□□□□□ -0.59
SNX29-204ENST00000564791 ANKRD20A4Q4UJ75 823 aa11.36□□□□□ -0.59
SNX29-204ENST00000564791 PCID2Q5JVF3 399 aa11.36□□□□□ -0.59
SNX29-204ENST00000564791 DGKKQ5KSL6 1271 aa11.36□□□□□ -0.59
SNX29-204ENST00000564791 C22orf39Q6P5X5 142 aa11.36□□□□□ -0.59
SNX29-204ENST00000564791 SRLQ86TD4 932 aa11.36□□□□□ -0.59
SNX29-204ENST00000564791 METTL3Q86U44 580 aaKnown RBP11.36□□□□□ -0.59
SNX29-204ENST00000564791 TMEM135Q86UB9 458 aa11.36□□□□□ -0.59
SNX29-204ENST00000564791 TDRPQ86YL5 185 aa11.36□□□□□ -0.59
SNX29-204ENST00000564791 YAF2Q8IY57 180 aa11.36□□□□□ -0.59
SNX29-204ENST00000564791 PPHLN1Q8NEY8 458 aaKnown RBP11.36□□□□□ -0.59
SNX29-204ENST00000564791 OR6K2Q8NGY2 324 aa11.36□□□□□ -0.59
SNX29-204ENST00000564791 MYLIPQ8WY64 445 aa11.36□□□□□ -0.59
SNX29-204ENST00000564791 FGF14Q92915 247 aa11.36□□□□□ -0.59
SNX29-204ENST00000564791 TTC17Q96AE7 1141 aa11.36□□□□□ -0.59
SNX29-204ENST00000564791 ELSPBP1Q96BH3 223 aa11.36□□□□□ -0.59
SNX29-204ENST00000564791 TLCD1Q96CP7 247 aa11.36□□□□□ -0.59
SNX29-204ENST00000564791 LRCH3Q96II8 777 aa11.36□□□□□ -0.59
SNX29-204ENST00000564791 DHRS4Q9BTZ2 278 aa11.36□□□□□ -0.59
SNX29-204ENST00000564791 KIFC1Q9BW19 673 aa11.36□□□□□ -0.59
SNX29-204ENST00000564791 TDRD1Q9BXT4 1180 aaKnown RBP11.36□□□□□ -0.59
SNX29-204ENST00000564791 TNKS2Q9H2K2 1166 aa11.36□□□□□ -0.59
SNX29-204ENST00000564791 PPCSQ9HAB8 311 aa11.36□□□□□ -0.59
SNX29-204ENST00000564791 SMYD2Q9NRG4 433 aa11.36□□□□□ -0.59
SNX29-204ENST00000564791 MOCS1Q9NZB8 636 aa11.36□□□□□ -0.59
SNX29-204ENST00000564791 VPS18Q9P253 973 aa11.36□□□□□ -0.59
SNX29-204ENST00000564791 FETUBQ9UGM5 382 aa11.36□□□□□ -0.59
SNX29-204ENST00000564791 TBK1Q9UHD2 729 aa11.36□□□□□ -0.59
SNX29-204ENST00000564791 SLC24A2Q9UI40 661 aa11.36□□□□□ -0.59
SNX29-204ENST00000564791 CD207Q9UJ71 328 aa11.36□□□□□ -0.59
SNX29-204ENST00000564791 NOVA2Q9UNW9 492 aaKnown RBP11.36□□□□□ -0.59
SNX29-204ENST00000564791 CHKBQ9Y259 395 aa11.36□□□□□ -0.59
SNX29-204ENST00000564791 TCAF1Q9Y4C2 921 aa11.36□□□□□ -0.59
SNX29-204ENST00000564791 USP15Q9Y4E8 981 aaPredicted RBP11.36□□□□□ -0.59
SNX29-204ENST00000564791 RAI2Q9Y5P3 530 aa11.36□□□□□ -0.59
SNX29-204ENST00000564791 ZCWPW2A0A1B0GU75 182 aa11.35□□□□□ -0.59
SNX29-204ENST00000564791 MAGEB16A2A368 324 aa11.35□□□□□ -0.59
SNX29-204ENST00000564791 CCDC78A2IDD5 438 aa11.35□□□□□ -0.59
SNX29-204ENST00000564791 FAM159BA6NKW6 160 aa11.35□□□□□ -0.59
SNX29-204ENST00000564791 ALDH1A2O94788 518 aa11.35□□□□□ -0.59
SNX29-204ENST00000564791 NDST3O95803 873 aa11.35□□□□□ -0.59
SNX29-204ENST00000564791 IGSF6O95976 241 aa11.35□□□□□ -0.59
SNX29-204ENST00000564791 PRLP01236 227 aa11.35□□□□□ -0.59
SNX29-204ENST00000564791 EPOP01588 193 aa11.35□□□□□ -0.59
SNX29-204ENST00000564791 FGF1P05230 155 aa11.35□□□□□ -0.59
SNX29-204ENST00000564791 PSMC3P17980 439 aa11.35□□□□□ -0.59
SNX29-204ENST00000564791 POLR2EP19388 210 aaKnown RBP11.35□□□□□ -0.59
SNX29-204ENST00000564791 NMBRP28336 390 aa11.35□□□□□ -0.59
SNX29-204ENST00000564791 SLC6A11P48066 632 aa11.35□□□□□ -0.59
SNX29-204ENST00000564791 AP1S1P61966 158 aa11.35□□□□□ -0.59
SNX29-204ENST00000564791 MSLNQ13421 630 aaPredicted RBP11.35□□□□□ -0.59
SNX29-204ENST00000564791 TNFAIP8L3Q5GJ75 292 aa11.35□□□□□ -0.59
SNX29-204ENST00000564791 RALGPS1Q5JS13 557 aa11.35□□□□□ -0.59
SNX29-204ENST00000564791 PKN3Q6P5Z2 889 aa11.35□□□□□ -0.59
SNX29-204ENST00000564791 CTAGE3PQ8IX95 158 aa11.35□□□□□ -0.59
SNX29-204ENST00000564791 CYP4X1Q8N118 509 aa11.35□□□□□ -0.59
SNX29-204ENST00000564791 RIBC1Q8N443 379 aaPredicted RBP11.35□□□□□ -0.59
SNX29-204ENST00000564791 CPA6Q8N4T0 437 aa11.35□□□□□ -0.59
SNX29-204ENST00000564791 PPM1NQ8N819 430 aa11.35□□□□□ -0.59
SNX29-204ENST00000564791 SERBP1Q8NC51 408 aaKnown RBP eCLIP11.35□□□□□ -0.59
SNX29-204ENST00000564791 TTC8Q8TAM2 541 aa11.35□□□□□ -0.59
SNX29-204ENST00000564791 WFIKKN2Q8TEU8 576 aa11.35□□□□□ -0.59
SNX29-204ENST00000564791 DCAKDQ8WVC6 231 aa11.35□□□□□ -0.59
SNX29-204ENST00000564791 SORCS1Q8WY21 1168 aa11.35□□□□□ -0.59
SNX29-204ENST00000564791 SUSD6Q92537 303 aa11.35□□□□□ -0.59
SNX29-204ENST00000564791 MFSD3Q96ES6 412 aa11.35□□□□□ -0.59
SNX29-204ENST00000564791 PKNOX2Q96KN3 472 aa11.35□□□□□ -0.59
SNX29-204ENST00000564791 ZNF778Q96MU6 729 aa11.35□□□□□ -0.59
SNX29-204ENST00000564791 NECTIN4Q96NY8 510 aa11.35□□□□□ -0.59
SNX29-204ENST00000564791 GAS2L1Q99501 681 aaPredicted RBP11.35□□□□□ -0.59
SNX29-204ENST00000564791 MRM3Q9HC36 420 aaKnown RBP11.35□□□□□ -0.59
SNX29-204ENST00000564791 IL1RAPL1Q9NZN1 696 aa11.35□□□□□ -0.59
SNX29-204ENST00000564791 PSMC3IPQ9P2W1 217 aaPredicted RBP11.35□□□□□ -0.59
SNX29-204ENST00000564791 EVLQ9UI08 416 aaPredicted RBP11.35□□□□□ -0.59
SNX29-204ENST00000564791 ERVW-1Q9UQF0 538 aa11.35□□□□□ -0.59
SNX29-204ENST00000564791 PCDHGC4Q9Y5F7 938 aa11.35□□□□□ -0.59
SNX29-204ENST00000564791 SPTBN5Q9NRC6 3674 aaKnown RBP11.35□□□□□ -0.59
SNX29-204ENST00000564791 MUC22E2RYF6 1773 aaPredicted RBP11.35□□□□□ -0.59
SNX29-204ENST00000564791 TICRRQ7Z2Z1 1910 aa11.35□□□□□ -0.59
SNX29-204ENST00000564791 FOXO6A8MYZ6 492 aa11.35□□□□□ -0.59
SNX29-204ENST00000564791 H3BQ06 376 aaPredicted RBP11.35□□□□□ -0.59
SNX29-204ENST00000564791 ECI2O75521 394 aa11.35□□□□□ -0.59
SNX29-204ENST00000564791 PRKCGP05129 697 aa11.35□□□□□ -0.59
SNX29-204ENST00000564791 SP100P23497 879 aaPredicted RBP11.35□□□□□ -0.59
SNX29-204ENST00000564791 ADRA1DP25100 572 aa11.35□□□□□ -0.59
SNX29-204ENST00000564791 MSH2P43246 934 aa11.35□□□□□ -0.59
SNX29-204ENST00000564791 CSNK1DP48730 415 aa11.35□□□□□ -0.59
SNX29-204ENST00000564791 MAGOHP61326 146 aaKnown RBP11.35□□□□□ -0.59
SNX29-204ENST00000564791 KDSRQ06136 332 aa11.35□□□□□ -0.59
SNX29-204ENST00000564791 MESP2Q0VG99 397 aa11.35□□□□□ -0.59
SNX29-204ENST00000564791 FRG1Q14331 258 aaKnown RBP11.35□□□□□ -0.59
SNX29-204ENST00000564791 GRAMD4Q6IC98 578 aa11.35□□□□□ -0.59
SNX29-204ENST00000564791 RASSF3Q86WH2 238 aa11.35□□□□□ -0.59
SNX29-204ENST00000564791 LPCAT1Q8NF37 534 aa11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms