RNA–Protein interactions for RNA: ENST00000564641.1

CHD9-212, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 4

Gene CHD9, Length 589 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-212ENST00000564641 GRSF1Q12849 480 aaKnown RBP eCLIP4.48□□□□□ -1.69
CHD9-212ENST00000564641 SNTA1Q13424 505 aa4.48□□□□□ -1.69
CHD9-212ENST00000564641 THOC5Q13769 683 aaKnown RBP4.48□□□□□ -1.69
CHD9-212ENST00000564641 PUM3Q15397 648 aaKnown RBP4.48□□□□□ -1.69
CHD9-212ENST00000564641 MUC20Q8N307 709 aaPredicted RBP4.48□□□□□ -1.69
CHD9-212ENST00000564641 ZMIZ2Q8NF64 920 aa4.48□□□□□ -1.69
CHD9-212ENST00000564641 NCSTNQ92542 709 aa4.48□□□□□ -1.69
CHD9-212ENST00000564641 DDX23Q9BUQ8 820 aaKnown RBP4.48□□□□□ -1.69
CHD9-212ENST00000564641 LHPPQ9H008 270 aa4.48□□□□□ -1.69
CHD9-212ENST00000564641 TCF7L2Q9NQB0 619 aa4.48□□□□□ -1.69
CHD9-212ENST00000564641 THAP1Q9NVV9 213 aa4.48□□□□□ -1.69
CHD9-212ENST00000564641 PAM16Q9Y3D7 125 aa4.48□□□□□ -1.69
CHD9-212ENST00000564641 NFS1Q9Y697 457 aa4.48□□□□□ -1.69
CHD9-212ENST00000564641 CDC42BPBQ9Y5S2 1711 aa4.48□□□□□ -1.69
CHD9-212ENST00000564641 PLA2R1Q13018 1463 aa4.48□□□□□ -1.69
CHD9-212ENST00000564641 C3P01024 1663 aa4.48□□□□□ -1.69
CHD9-212ENST00000564641 MAGEA13PA6NCF6 341 aa4.47□□□□□ -1.69
CHD9-212ENST00000564641 FAM90A20PA6NIJ5 464 aa4.47□□□□□ -1.69
CHD9-212ENST00000564641 BMPR1BO00238 502 aa4.47□□□□□ -1.69
CHD9-212ENST00000564641 CHL1O00533 1208 aa4.47□□□□□ -1.69
CHD9-212ENST00000564641 TOM1O60784 492 aa4.47□□□□□ -1.69
CHD9-212ENST00000564641 CYP21A2P08686 494 aa4.47□□□□□ -1.69
CHD9-212ENST00000564641 DHRS4L1P0CG22 281 aa4.47□□□□□ -1.69
CHD9-212ENST00000564641 TSPY4P0CV99 314 aa4.47□□□□□ -1.69
CHD9-212ENST00000564641 TSPY10P0CW01 314 aa4.47□□□□□ -1.69
CHD9-212ENST00000564641 ACP5P13686 325 aa4.47□□□□□ -1.69
CHD9-212ENST00000564641 DCTDP32321 178 aa4.47□□□□□ -1.69
CHD9-212ENST00000564641 ECT2LQ008S8 904 aa4.47□□□□□ -1.69
CHD9-212ENST00000564641 GALNT1Q10472 559 aaPredicted RBP4.47□□□□□ -1.69
CHD9-212ENST00000564641 FOXO1Q12778 655 aa4.47□□□□□ -1.69
CHD9-212ENST00000564641 CTTNQ14247 550 aaKnown RBP4.47□□□□□ -1.69
CHD9-212ENST00000564641 MYBPC2Q14324 1141 aa4.47□□□□□ -1.69
CHD9-212ENST00000564641 SF3B4Q15427 424 aaKnown RBP eCLIP4.47□□□□□ -1.692e-6■■■■■ 29.7
CHD9-212ENST00000564641 TANGO2Q6ICL3 276 aa4.47□□□□□ -1.69
CHD9-212ENST00000564641 TYW3Q6IPR3 259 aaKnown RBP4.47□□□□□ -1.69
CHD9-212ENST00000564641 XRRA1Q6P2D8 792 aa4.47□□□□□ -1.69
CHD9-212ENST00000564641 KLHL24Q6TFL4 600 aa4.47□□□□□ -1.69
CHD9-212ENST00000564641 RASGRP2Q7LDG7 609 aa4.47□□□□□ -1.69
CHD9-212ENST00000564641 ATG16L2Q8NAA4 619 aa4.47□□□□□ -1.69
CHD9-212ENST00000564641 OR6Y1Q8NGX8 325 aa4.47□□□□□ -1.69
CHD9-212ENST00000564641 RMDN3Q96TC7 470 aa4.47□□□□□ -1.69
CHD9-212ENST00000564641 NPFFR1Q9GZQ6 430 aa4.47□□□□□ -1.69
CHD9-212ENST00000564641 ACAD9Q9H845 621 aa4.47□□□□□ -1.69
CHD9-212ENST00000564641 DACT1Q9NYF0 836 aa4.47□□□□□ -1.69
CHD9-212ENST00000564641 ADGBQ8N7X0 1667 aa4.47□□□□□ -1.69
CHD9-212ENST00000564641 RTEL1-TNFRSF6BF6WH68 1400 aa4.46□□□□□ -1.69
CHD9-212ENST00000564641 ATP7AQ04656 1500 aa4.46□□□□□ -1.69
CHD9-212ENST00000564641 ABCA6Q8N139 1617 aa4.46□□□□□ -1.69
CHD9-212ENST00000564641 CDC42BPAQ5VT25 1732 aa4.46□□□□□ -1.69
CHD9-212ENST00000564641 A2MP01023 1474 aa4.46□□□□□ -1.7
CHD9-212ENST00000564641 CYSRT1A8MQ03 144 aa4.46□□□□□ -1.7
CHD9-212ENST00000564641 FAM157AC9JC47 383 aa4.46□□□□□ -1.7
CHD9-212ENST00000564641 ACKR2O00590 384 aa4.46□□□□□ -1.7
CHD9-212ENST00000564641 HBP1O60381 514 aa4.46□□□□□ -1.7
CHD9-212ENST00000564641 SOCS5O75159 536 aa4.46□□□□□ -1.7
CHD9-212ENST00000564641 IGLV2-11P01706 119 aa4.46□□□□□ -1.7
CHD9-212ENST00000564641 UMODP07911 640 aa4.46□□□□□ -1.7
CHD9-212ENST00000564641 LYL1P12980 280 aa4.46□□□□□ -1.7
CHD9-212ENST00000564641 ARSAP15289 507 aa4.46□□□□□ -1.7
CHD9-212ENST00000564641 AVPR2P30518 371 aa4.46□□□□□ -1.7
CHD9-212ENST00000564641 FMO4P31512 558 aa4.46□□□□□ -1.7
CHD9-212ENST00000564641 MVDP53602 400 aa4.46□□□□□ -1.7
CHD9-212ENST00000564641 GOLGA8FQ08AF8 430 aa4.46□□□□□ -1.7
CHD9-212ENST00000564641 ACSM2AQ08AH3 577 aa4.46□□□□□ -1.7
CHD9-212ENST00000564641 FAM27E3Q08E93 113 aa4.46□□□□□ -1.7
CHD9-212ENST00000564641 ILF3Q12906 894 aaKnown RBP eCLIP4.46□□□□□ -1.73e-6■■■■□ 20.7
CHD9-212ENST00000564641 MORC3Q14149 939 aa4.46□□□□□ -1.7
CHD9-212ENST00000564641 BRD3Q15059 726 aa4.46□□□□□ -1.7
CHD9-212ENST00000564641 SMAD1Q15797 465 aaKnown RBP4.46□□□□□ -1.7
CHD9-212ENST00000564641 LIN54Q6MZP7 749 aa4.46□□□□□ -1.7
CHD9-212ENST00000564641 NEXN-AS1Q8NBZ9 246 aa4.46□□□□□ -1.7
CHD9-212ENST00000564641 BICD1Q96G01 975 aa4.46□□□□□ -1.7
CHD9-212ENST00000564641 GAREM1Q9H706 876 aa4.46□□□□□ -1.7
CHD9-212ENST00000564641 TMEM51Q9NW97 253 aa4.46□□□□□ -1.7
CHD9-212ENST00000564641 LRFN1Q9P244 771 aa4.46□□□□□ -1.7
CHD9-212ENST00000564641 KCND3Q9UK17 655 aa4.46□□□□□ -1.7
CHD9-212ENST00000564641 CLDN16Q9Y5I7 305 aa4.46□□□□□ -1.7
CHD9-212ENST00000564641 EHBP1L1Q8N3D4 1523 aa4.46□□□□□ -1.7
CHD9-212ENST00000564641 NCOA1Q15788 1441 aa4.46□□□□□ -1.7
CHD9-212ENST00000564641 KIDINS220Q9ULH0 1771 aa4.45□□□□□ -1.7
CHD9-212ENST00000564641 SAMD9LQ8IVG5 1584 aa4.45□□□□□ -1.7
CHD9-212ENST00000564641 SAA2-SAA4A0A096LPE2 208 aa4.45□□□□□ -1.7
CHD9-212ENST00000564641 DYTNA2CJ06 578 aa4.45□□□□□ -1.7
CHD9-212ENST00000564641 GAGE7O76087 117 aa4.45□□□□□ -1.7
CHD9-212ENST00000564641 IL1AP01583 271 aa4.45□□□□□ -1.7
CHD9-212ENST00000564641 GAGE12FP0CL80 117 aa4.45□□□□□ -1.7
CHD9-212ENST00000564641 GAGE12GP0CL81 117 aa4.45□□□□□ -1.7
CHD9-212ENST00000564641 GAGE12IP0CL82 117 aa4.45□□□□□ -1.7
CHD9-212ENST00000564641 RPL3P39023 403 aaKnown RBP4.45□□□□□ -1.7
CHD9-212ENST00000564641 HTR3AP46098 478 aa4.45□□□□□ -1.7
CHD9-212ENST00000564641 GAGE1Q13065 139 aa4.45□□□□□ -1.7
CHD9-212ENST00000564641 GAGE4Q13068 117 aa4.45□□□□□ -1.7
CHD9-212ENST00000564641 MYBPHQ13203 477 aa4.45□□□□□ -1.7
CHD9-212ENST00000564641 SYCP2LQ5T4T6 812 aa4.45□□□□□ -1.7
CHD9-212ENST00000564641 TOGARAM2Q6ZUX3 1019 aa4.45□□□□□ -1.7
CHD9-212ENST00000564641 TMPRSS12Q86WS5 348 aa4.45□□□□□ -1.7
CHD9-212ENST00000564641 NAGSQ8N159 534 aa4.45□□□□□ -1.7
CHD9-212ENST00000564641 OR4N2Q8NGD1 307 aa4.45□□□□□ -1.7
CHD9-212ENST00000564641 STT3BQ8TCJ2 826 aa4.45□□□□□ -1.7
CHD9-212ENST00000564641 OTULINQ96BN8 352 aa4.45□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms