RNA–Protein interactions for RNA: ENST00000563573.5

CDR2-203, Transcript of cerebellar degeneration related protein 2, humanhuman

TSL 4

Gene CDR2, Length 556 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDR2-203ENST00000563573 BUB1O43683 1085 aa4.81□□□□□ -1.64
CDR2-203ENST00000563573 PPFIA2O75334 1257 aa4.81□□□□□ -1.64
CDR2-203ENST00000563573 FGF18O76093 207 aa4.81□□□□□ -1.64
CDR2-203ENST00000563573 CYP1A2P05177 515 aa4.81□□□□□ -1.64
CDR2-203ENST00000563573 KRT3P12035 628 aa4.81□□□□□ -1.64
CDR2-203ENST00000563573 CCDC130P13994 396 aa4.81□□□□□ -1.64
CDR2-203ENST00000563573 BDNFP23560 247 aa4.81□□□□□ -1.64
CDR2-203ENST00000563573 OR1D2P34982 312 aa4.81□□□□□ -1.64
CDR2-203ENST00000563573 CTNNB1P35222 781 aa4.81□□□□□ -1.64
CDR2-203ENST00000563573 PBX3P40426 434 aa4.81□□□□□ -1.64
CDR2-203ENST00000563573 MAGEA11P43364 429 aa4.81□□□□□ -1.64
CDR2-203ENST00000563573 GLUD2P49448 558 aa4.81□□□□□ -1.64
CDR2-203ENST00000563573 MAP3K7CLP57077 242 aa4.81□□□□□ -1.64
CDR2-203ENST00000563573 RPL10AP62906 217 aaKnown RBP4.81□□□□□ -1.64
CDR2-203ENST00000563573 DSG1Q02413 1049 aa4.81□□□□□ -1.64
CDR2-203ENST00000563573 UBE3AQ05086 875 aa4.81□□□□□ -1.64
CDR2-203ENST00000563573 GPR17Q13304 367 aa4.81□□□□□ -1.64
CDR2-203ENST00000563573 TUBB2AQ13885 445 aa4.81□□□□□ -1.64
CDR2-203ENST00000563573 SMC1AQ14683 1233 aaKnown RBP4.81□□□□□ -1.64
CDR2-203ENST00000563573 ACAP1Q15027 740 aa4.81□□□□□ -1.64
CDR2-203ENST00000563573 SHHQ15465 462 aa4.81□□□□□ -1.64
CDR2-203ENST00000563573 ELAVL1Q15717 326 aaKnown RBP4.81□□□□□ -1.64
CDR2-203ENST00000563573 RAB30Q15771 203 aa4.81□□□□□ -1.64
CDR2-203ENST00000563573 TAF12Q16514 161 aa4.81□□□□□ -1.64
CDR2-203ENST00000563573 CFAP221Q4G0U5 840 aa4.81□□□□□ -1.64
CDR2-203ENST00000563573 ODF2Q5BJF6 829 aa4.81□□□□□ -1.64
CDR2-203ENST00000563573 EFHC1Q5JVL4 640 aa4.81□□□□□ -1.64
CDR2-203ENST00000563573 PRAMEF9Q5VWM5 478 aa4.81□□□□□ -1.64
CDR2-203ENST00000563573 EGFLAMQ63HQ2 1017 aa4.81□□□□□ -1.64
CDR2-203ENST00000563573 TPGS2Q68CL5 300 aa4.81□□□□□ -1.64
CDR2-203ENST00000563573 DNAJC24Q6P3W2 148 aa4.81□□□□□ -1.64
CDR2-203ENST00000563573 VSTM1Q6UX27 236 aa4.81□□□□□ -1.64
CDR2-203ENST00000563573 MON1BQ7L1V2 547 aa4.81□□□□□ -1.64
CDR2-203ENST00000563573 TAS1R1Q7RTX1 841 aa4.81□□□□□ -1.64
CDR2-203ENST00000563573 DAAM2Q86T65 1068 aa4.81□□□□□ -1.64
CDR2-203ENST00000563573 TMEM110Q86TL2 294 aa4.81□□□□□ -1.64
CDR2-203ENST00000563573 PHYKPLQ8IUZ5 450 aa4.81□□□□□ -1.64
CDR2-203ENST00000563573 SCN4BQ8IWT1 228 aa4.81□□□□□ -1.64
CDR2-203ENST00000563573 VPS52Q8N1B4 723 aa4.81□□□□□ -1.64
CDR2-203ENST00000563573 SIX6OS1Q8N1H7 587 aa4.81□□□□□ -1.64
CDR2-203ENST00000563573 SLC39A11Q8N1S5 342 aa4.81□□□□□ -1.64
CDR2-203ENST00000563573 C17orf53Q8N3J3 647 aaPredicted RBP4.81□□□□□ -1.64
CDR2-203ENST00000563573 KIF18AQ8NI77 898 aa4.81□□□□□ -1.64
CDR2-203ENST00000563573 GADD45GIP1Q8TAE8 222 aaPredicted RBP4.81□□□□□ -1.64
CDR2-203ENST00000563573 ZNF564Q8TBZ8 553 aaPredicted RBP4.81□□□□□ -1.64
CDR2-203ENST00000563573 RFFLQ8WZ73 363 aa4.81□□□□□ -1.64
CDR2-203ENST00000563573 MYLPFQ96A32 169 aa4.81□□□□□ -1.64
CDR2-203ENST00000563573 PCED1BQ96HM7 432 aa4.81□□□□□ -1.64
CDR2-203ENST00000563573 C16orf45Q96MC5 204 aaPredicted RBP4.81□□□□□ -1.64
CDR2-203ENST00000563573 TGS1Q96RS0 853 aaKnown RBP4.81□□□□□ -1.64
CDR2-203ENST00000563573 NCAPGQ9BPX3 1015 aa4.81□□□□□ -1.64
CDR2-203ENST00000563573 C11orf70Q9BRQ4 267 aa4.81□□□□□ -1.64
CDR2-203ENST00000563573 TUBB2BQ9BVA1 445 aa4.81□□□□□ -1.64
CDR2-203ENST00000563573 HERC2P3Q9BVR0 1158 aa4.81□□□□□ -1.64
CDR2-203ENST00000563573 NUP85Q9BW27 656 aa4.81□□□□□ -1.64
CDR2-203ENST00000563573 PACSIN1Q9BY11 444 aa4.81□□□□□ -1.64
CDR2-203ENST00000563573 GPR87Q9BY21 358 aa4.81□□□□□ -1.64
CDR2-203ENST00000563573 OSBPL6Q9BZF3 934 aa4.81□□□□□ -1.64
CDR2-203ENST00000563573 LRRC4Q9HBW1 653 aa4.81□□□□□ -1.64
CDR2-203ENST00000563573 CSNK1G1Q9HCP0 422 aa4.81□□□□□ -1.64
CDR2-203ENST00000563573 PNPLA8Q9NP80 782 aa4.81□□□□□ -1.64
CDR2-203ENST00000563573 COMMD8Q9NX08 183 aa4.81□□□□□ -1.64
CDR2-203ENST00000563573 EHD2Q9NZN4 543 aa4.81□□□□□ -1.64
CDR2-203ENST00000563573 FNIP2Q9P278 1114 aa4.81□□□□□ -1.64
CDR2-203ENST00000563573 HECAQ9UBI9 543 aaPredicted RBP4.81□□□□□ -1.64
CDR2-203ENST00000563573 B4GALT6Q9UBX8 382 aa4.81□□□□□ -1.64
CDR2-203ENST00000563573 IP6K2Q9UHH9 426 aa4.81□□□□□ -1.64
CDR2-203ENST00000563573 DPP7Q9UHL4 492 aa4.81□□□□□ -1.64
CDR2-203ENST00000563573 NENFQ9UMX5 172 aa4.81□□□□□ -1.64
CDR2-203ENST00000563573 LZTS1Q9Y250 596 aa4.81□□□□□ -1.64
CDR2-203ENST00000563573 JRKLQ9Y4A0 524 aa4.81□□□□□ -1.64
CDR2-203ENST00000563573 NME7Q9Y5B8 376 aa4.81□□□□□ -1.64
CDR2-203ENST00000563573 CDY1Q9Y6F8 540 aa4.81□□□□□ -1.64
CDR2-203ENST00000563573 PTPRDP23468 1912 aa4.81□□□□□ -1.64
CDR2-203ENST00000563573 LINC01553A4QN01 128 aa4.8□□□□□ -1.64
CDR2-203ENST00000563573 E5RJQ4 531 aa4.8□□□□□ -1.64
CDR2-203ENST00000563573 GOLGA8SH3BPF8 625 aa4.8□□□□□ -1.64
CDR2-203ENST00000563573 CAPN9O14815 690 aa4.8□□□□□ -1.64
CDR2-203ENST00000563573 HCRTO43612 131 aa4.8□□□□□ -1.64
CDR2-203ENST00000563573 TBC1D4O60343 1298 aa4.8□□□□□ -1.64
CDR2-203ENST00000563573 RAMP2O60895 175 aa4.8□□□□□ -1.64
CDR2-203ENST00000563573 PALMO75781 387 aa4.8□□□□□ -1.64
CDR2-203ENST00000563573 RNF8O76064 485 aa4.8□□□□□ -1.64
CDR2-203ENST00000563573 MTA2O94776 668 aa4.8□□□□□ -1.64
CDR2-203ENST00000563573 RTN3O95197 1032 aaPredicted RBP4.8□□□□□ -1.64
CDR2-203ENST00000563573 MOCS3O95396 460 aa4.8□□□□□ -1.64
CDR2-203ENST00000563573 CTSAP10619 480 aa4.8□□□□□ -1.64
CDR2-203ENST00000563573 HAPLN1P10915 354 aaPredicted RBP4.8□□□□□ -1.64
CDR2-203ENST00000563573 RRM1P23921 792 aa4.8□□□□□ -1.64
CDR2-203ENST00000563573 CYP2F1P24903 491 aa4.8□□□□□ -1.64
CDR2-203ENST00000563573 KLRC2P26717 231 aa4.8□□□□□ -1.64
CDR2-203ENST00000563573 CETN2P41208 172 aa4.8□□□□□ -1.64
CDR2-203ENST00000563573 SLC1A1P43005 524 aa4.8□□□□□ -1.64
CDR2-203ENST00000563573 ALDH1A3P47895 512 aa4.8□□□□□ -1.64
CDR2-203ENST00000563573 RPL34P49207 117 aaKnown RBP4.8□□□□□ -1.64
CDR2-203ENST00000563573 RGS19P49795 217 aa4.8□□□□□ -1.64
CDR2-203ENST00000563573 RGS7P49802 495 aa4.8□□□□□ -1.64
CDR2-203ENST00000563573 NDUFV1P49821 464 aa4.8□□□□□ -1.64
CDR2-203ENST00000563573 RABGGTBP53611 331 aa4.8□□□□□ -1.64
CDR2-203ENST00000563573 HADHBP55084 474 aaKnown RBP4.8□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms