RNA–Protein interactions for RNA: ENST00000561817.5

CAPN3-210, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 915 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-210ENST00000561817 KDELR3O43731 214 aa6.62□□□□□ -1.35
CAPN3-210ENST00000561817 CLASP2O75122 1294 aaKnown RBP6.62□□□□□ -1.35
CAPN3-210ENST00000561817 CLDN11O75508 207 aa6.62□□□□□ -1.35
CAPN3-210ENST00000561817 RFPL1O75677 317 aa6.62□□□□□ -1.35
CAPN3-210ENST00000561817 ZMPSTE24O75844 475 aa6.62□□□□□ -1.35
CAPN3-210ENST00000561817 ANXA9O76027 345 aa6.62□□□□□ -1.35
CAPN3-210ENST00000561817 USP1O94782 785 aa6.62□□□□□ -1.35
CAPN3-210ENST00000561817 ASMTLO95671 621 aa6.62□□□□□ -1.35
CAPN3-210ENST00000561817 RB1P06400 928 aa6.62□□□□□ -1.35
CAPN3-210ENST00000561817 POU2F2P09086 479 aa6.62□□□□□ -1.35
CAPN3-210ENST00000561817 BRAFP15056 766 aa6.62□□□□□ -1.35
CAPN3-210ENST00000561817 PFKLP17858 780 aa6.62□□□□□ -1.35
CAPN3-210ENST00000561817 CR2P20023 1033 aa6.62□□□□□ -1.35
CAPN3-210ENST00000561817 DRD4P21917 467 aa6.62□□□□□ -1.35
CAPN3-210ENST00000561817 GABRR2P28476 465 aa6.62□□□□□ -1.35
CAPN3-210ENST00000561817 ATP5DP30049 168 aa6.62□□□□□ -1.35
CAPN3-210ENST00000561817 OR1E1P30953 314 aa6.62□□□□□ -1.35
CAPN3-210ENST00000561817 CCNFP41002 786 aa6.62□□□□□ -1.35
CAPN3-210ENST00000561817 MSH2P43246 934 aa6.62□□□□□ -1.35
CAPN3-210ENST00000561817 RENBPP51606 427 aa6.62□□□□□ -1.35
CAPN3-210ENST00000561817 NEK3P51956 506 aa6.62□□□□□ -1.35
CAPN3-210ENST00000561817 SEC24CP53992 1094 aa6.62□□□□□ -1.35
CAPN3-210ENST00000561817 GEMP55040 296 aa6.62□□□□□ -1.35
CAPN3-210ENST00000561817 WNT3AP56704 352 aa6.62□□□□□ -1.35
CAPN3-210ENST00000561817 SMAD3P84022 425 aaKnown RBP6.62□□□□□ -1.35
CAPN3-210ENST00000561817 CYP4F8P98187 520 aa6.62□□□□□ -1.35
CAPN3-210ENST00000561817 GNA12Q03113 381 aa6.62□□□□□ -1.35
CAPN3-210ENST00000561817 PPARDQ03181 441 aa6.62□□□□□ -1.35
CAPN3-210ENST00000561817 POLD3Q15054 466 aaPredicted RBP6.62□□□□□ -1.35
CAPN3-210ENST00000561817 SKIDA1Q1XH10 827 aa6.62□□□□□ -1.35
CAPN3-210ENST00000561817 ANO4Q32M45 955 aa6.62□□□□□ -1.35
CAPN3-210ENST00000561817 ANKRD20A4Q4UJ75 823 aa6.62□□□□□ -1.35
CAPN3-210ENST00000561817 SPANXN3Q5MJ09 141 aa6.62□□□□□ -1.35
CAPN3-210ENST00000561817 RABGAP1LQ5R372 815 aa6.62□□□□□ -1.35
CAPN3-210ENST00000561817 PLPP4Q5VZY2 271 aa6.62□□□□□ -1.35
CAPN3-210ENST00000561817 ARMC3Q5W041 872 aa6.62□□□□□ -1.35
CAPN3-210ENST00000561817 TIFABQ6ZNK6 161 aa6.62□□□□□ -1.35
CAPN3-210ENST00000561817 CCDC149Q6ZUS6 474 aa6.62□□□□□ -1.35
CAPN3-210ENST00000561817 HTR3DQ70Z44 454 aa6.62□□□□□ -1.35
CAPN3-210ENST00000561817 TAOK1Q7L7X3 1001 aa6.62□□□□□ -1.35
CAPN3-210ENST00000561817 TMC7Q7Z402 723 aa6.62□□□□□ -1.35
CAPN3-210ENST00000561817 SLC26A11Q86WA9 606 aa6.62□□□□□ -1.35
CAPN3-210ENST00000561817 LRRC6Q86X45 466 aa6.62□□□□□ -1.35
CAPN3-210ENST00000561817 SRRM1Q8IYB3 904 aaKnown RBP6.62□□□□□ -1.35
CAPN3-210ENST00000561817 BANPQ8N9N5 519 aa6.62□□□□□ -1.35
CAPN3-210ENST00000561817 OR7D4Q8NG98 312 aa6.62□□□□□ -1.35
CAPN3-210ENST00000561817 RIN3Q8TB24 985 aa6.62□□□□□ -1.35
CAPN3-210ENST00000561817 SHKBP1Q8TBC3 707 aa6.62□□□□□ -1.35
CAPN3-210ENST00000561817 GDPD5Q8WTR4 605 aa6.62□□□□□ -1.35
CAPN3-210ENST00000561817 SERAC1Q96JX3 654 aa6.62□□□□□ -1.35
CAPN3-210ENST00000561817 LMLNQ96KR4 655 aa6.62□□□□□ -1.35
CAPN3-210ENST00000561817 ZNF599Q96NL3 588 aa6.62□□□□□ -1.35
CAPN3-210ENST00000561817 TBL1YQ9BQ87 522 aa6.62□□□□□ -1.35
CAPN3-210ENST00000561817 APOL2Q9BQE5 337 aa6.62□□□□□ -1.35
CAPN3-210ENST00000561817 EMILIN2Q9BXX0 1053 aa6.62□□□□□ -1.35
CAPN3-210ENST00000561817 SLC46A2Q9BY10 475 aa6.62□□□□□ -1.35
CAPN3-210ENST00000561817 RBCK1Q9BYM8 510 aa6.62□□□□□ -1.35
CAPN3-210ENST00000561817 TRABDQ9H4I3 376 aa6.62□□□□□ -1.35
CAPN3-210ENST00000561817 MRM3Q9HC36 420 aaKnown RBP6.62□□□□□ -1.35
CAPN3-210ENST00000561817 UBP1Q9NZI7 540 aa6.62□□□□□ -1.35
CAPN3-210ENST00000561817 SENP1Q9P0U3 644 aa6.62□□□□□ -1.35
CAPN3-210ENST00000561817 SLC17A6Q9P2U8 582 aa6.62□□□□□ -1.35
CAPN3-210ENST00000561817 PRKAG3Q9UGI9 489 aa6.62□□□□□ -1.35
CAPN3-210ENST00000561817 SOX13Q9UN79 622 aa6.62□□□□□ -1.35
CAPN3-210ENST00000561817 AAR2Q9Y312 384 aaKnown RBP6.62□□□□□ -1.35
CAPN3-210ENST00000561817 CPQQ9Y646 472 aa6.62□□□□□ -1.35
CAPN3-210ENST00000561817 MAD1L1Q9Y6D9 718 aa6.62□□□□□ -1.35
CAPN3-210ENST00000561817 FAM169AQ9Y6X4 670 aa6.62□□□□□ -1.35
CAPN3-210ENST00000561817 A0A1B0GVM2 712 aa6.61□□□□□ -1.35
CAPN3-210ENST00000561817 LOC285095A0A1B0GVY8 99 aa6.61□□□□□ -1.35
CAPN3-210ENST00000561817 MAGEB16A2A368 324 aa6.61□□□□□ -1.35
CAPN3-210ENST00000561817 TCAF2A6NFQ2 919 aa6.61□□□□□ -1.35
CAPN3-210ENST00000561817 FAM47DPA6NHR8 397 aa6.61□□□□□ -1.35
CAPN3-210ENST00000561817 RFXAPO00287 272 aa6.61□□□□□ -1.35
CAPN3-210ENST00000561817 CCL16O15467 120 aa6.61□□□□□ -1.35
CAPN3-210ENST00000561817 TSPAN3O60637 253 aa6.61□□□□□ -1.35
CAPN3-210ENST00000561817 SIN3BO75182 1162 aa6.61□□□□□ -1.35
CAPN3-210ENST00000561817 GJB3O75712 270 aa6.61□□□□□ -1.35
CAPN3-210ENST00000561817 GLUD1P00367 558 aa6.61□□□□□ -1.35
CAPN3-210ENST00000561817 LRG1P02750 347 aa6.61□□□□□ -1.35
CAPN3-210ENST00000561817 ATXN1LP0C7T5 689 aaKnown RBP6.61□□□□□ -1.35
CAPN3-210ENST00000561817 DHRS4L1P0CG22 281 aa6.61□□□□□ -1.35
CAPN3-210ENST00000561817 IRF1P10914 325 aa6.61□□□□□ -1.35
CAPN3-210ENST00000561817 MBL2P11226 248 aaPredicted RBP6.61□□□□□ -1.35
CAPN3-210ENST00000561817 TPH1P17752 444 aa6.61□□□□□ -1.35
CAPN3-210ENST00000561817 HDCP19113 662 aa6.61□□□□□ -1.35
CAPN3-210ENST00000561817 IGFBP4P22692 258 aa6.61□□□□□ -1.35
CAPN3-210ENST00000561817 GLDCP23378 1020 aa6.61□□□□□ -1.35
CAPN3-210ENST00000561817 ARNTP27540 789 aa6.61□□□□□ -1.35
CAPN3-210ENST00000561817 CDC25CP30307 473 aa6.61□□□□□ -1.35
CAPN3-210ENST00000561817 HOXA9P31269 272 aa6.61□□□□□ -1.35
CAPN3-210ENST00000561817 FOXN2P32314 431 aa6.61□□□□□ -1.35
CAPN3-210ENST00000561817 MAGEA12P43365 314 aa6.61□□□□□ -1.35
CAPN3-210ENST00000561817 ARCN1P48444 511 aaKnown RBP6.61□□□□□ -1.35
CAPN3-210ENST00000561817 CSRP3P50461 194 aa6.61□□□□□ -1.35
CAPN3-210ENST00000561817 ERVK-21P61565 698 aa6.61□□□□□ -1.35
CAPN3-210ENST00000561817 DSC2Q02487 901 aa6.61□□□□□ -1.35
CAPN3-210ENST00000561817 MGAT5Q09328 741 aa6.61□□□□□ -1.35
CAPN3-210ENST00000561817 CDH17Q12864 832 aa6.61□□□□□ -1.35
CAPN3-210ENST00000561817 MPP3Q13368 585 aa6.61□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms