RNA–Protein interactions for RNA: ENST00000560959.5

TPM1-226, Transcript of tropomyosin 1, humanhuman

TSL 2 BASIC

Gene TPM1, Length 925 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-226ENST00000560959 CCDC74AQ96AQ1 378 aa18.8■□□□□ 0.6
TPM1-226ENST00000560959 VOPP1Q96AW1 172 aa18.8■□□□□ 0.6
TPM1-226ENST00000560959 EDEM3Q9BZQ6 932 aa18.8■□□□□ 0.6
TPM1-226ENST00000560959 SLC25A18Q9H1K4 315 aa18.8■□□□□ 0.6
TPM1-226ENST00000560959 SYNCQ9H7C4 482 aa18.8■□□□□ 0.6
TPM1-226ENST00000560959 GGT7Q9UJ14 662 aa18.8■□□□□ 0.6
TPM1-226ENST00000560959 APPL1Q9UKG1 709 aa18.8■□□□□ 0.6
TPM1-226ENST00000560959 PCDHB11Q9Y5F2 797 aa18.8■□□□□ 0.6
TPM1-226ENST00000560959 PCDHGA4Q9Y5G9 962 aa18.8■□□□□ 0.6
TPM1-226ENST00000560959 SNX10Q9Y5X0 201 aa18.8■□□□□ 0.6
TPM1-226ENST00000560959 TLN1Q9Y490 2541 aaKnown RBP18.79■□□□□ 0.6
TPM1-226ENST00000560959 SRGAP2O75044 1071 aa18.79■□□□□ 0.6
TPM1-226ENST00000560959 RPLP0P05388 317 aaKnown RBP18.79■□□□□ 0.6
TPM1-226ENST00000560959 TFE3P19532 575 aaPredicted RBP18.79■□□□□ 0.6
TPM1-226ENST00000560959 CD82P27701 267 aa18.79■□□□□ 0.6
TPM1-226ENST00000560959 KRT9P35527 623 aa18.79■□□□□ 0.6
TPM1-226ENST00000560959 SULT1E1P49888 294 aa18.79■□□□□ 0.6
TPM1-226ENST00000560959 SNRPD1P62314 119 aaKnown RBP18.79■□□□□ 0.6
TPM1-226ENST00000560959 NFKB2Q00653 900 aa18.79■□□□□ 0.6
TPM1-226ENST00000560959 POLD3Q15054 466 aaPredicted RBP18.79■□□□□ 0.6
TPM1-226ENST00000560959 TTC7BQ86TV6 843 aa18.79■□□□□ 0.6
TPM1-226ENST00000560959 VPS36Q86VN1 386 aa18.79■□□□□ 0.6
TPM1-226ENST00000560959 PASD1Q8IV76 773 aa18.79■□□□□ 0.6
TPM1-226ENST00000560959 KYQ8NBH2 561 aa18.79■□□□□ 0.6
TPM1-226ENST00000560959 TP53I13Q8NBR0 393 aaPredicted RBP18.79■□□□□ 0.6
TPM1-226ENST00000560959 OR2AP1Q8NGE2 309 aa18.79■□□□□ 0.6
TPM1-226ENST00000560959 SHC3Q92529 594 aa18.79■□□□□ 0.6
TPM1-226ENST00000560959 CPEB1Q9BZB8 566 aaKnown RBP18.79■□□□□ 0.6
TPM1-226ENST00000560959 FOXP3Q9BZS1 431 aa18.79■□□□□ 0.6
TPM1-226ENST00000560959 WDR70Q9NW82 654 aa18.79■□□□□ 0.6
TPM1-226ENST00000560959 PISDQ9UG56 409 aa18.79■□□□□ 0.6
TPM1-226ENST00000560959 ITM2BQ9Y287 266 aa18.79■□□□□ 0.6
TPM1-226ENST00000560959 LOXL2Q9Y4K0 774 aa18.79■□□□□ 0.6
TPM1-226ENST00000560959 PPP1R3GB7ZBB8 358 aa18.78■□□□□ 0.6
TPM1-226ENST00000560959 IQCJ-SCHIP1C9J366 451 aaPredicted RBP18.78■□□□□ 0.6
TPM1-226ENST00000560959 CTSEP14091 401 aa18.78■□□□□ 0.6
TPM1-226ENST00000560959 HGFP14210 728 aa18.78■□□□□ 0.6
TPM1-226ENST00000560959 USP8P40818 1118 aa18.78■□□□□ 0.6
TPM1-226ENST00000560959 SRSF6Q13247 344 aaKnown RBP18.78■□□□□ 0.6
TPM1-226ENST00000560959 MYLK3Q32MK0 819 aa18.78■□□□□ 0.6
TPM1-226ENST00000560959 BNIPLQ7Z465 357 aa18.78■□□□□ 0.6
TPM1-226ENST00000560959 PCDH19Q8TAB3 1148 aa18.78■□□□□ 0.6
TPM1-226ENST00000560959 NELFBQ8WX92 580 aa18.78■□□□□ 0.6
TPM1-226ENST00000560959 ARHGEF2Q92974 986 aaKnown RBP18.78■□□□□ 0.6
TPM1-226ENST00000560959 TBCBQ99426 244 aa18.78■□□□□ 0.6
TPM1-226ENST00000560959 CMKLR1Q99788 373 aa18.78■□□□□ 0.6
TPM1-226ENST00000560959 TM6SF2Q9BZW4 377 aa18.78■□□□□ 0.6
TPM1-226ENST00000560959 ADNPQ9H2P0 1102 aa18.78■□□□□ 0.6
TPM1-226ENST00000560959 MBNL1Q9NR56 388 aaKnown RBP18.78■□□□□ 0.6
TPM1-226ENST00000560959 ANKMY1Q9P2S6 941 aa18.78■□□□□ 0.6
TPM1-226ENST00000560959 APEX2Q9UBZ4 518 aa18.78■□□□□ 0.6
TPM1-226ENST00000560959 GPR34Q9UPC5 381 aa18.78■□□□□ 0.6
TPM1-226ENST00000560959 MMP20O60882 483 aa18.77■□□□□ 0.6
TPM1-226ENST00000560959 RASGRP1O95267 797 aa18.77■□□□□ 0.6
TPM1-226ENST00000560959 CELA2BP08218 269 aaPredicted RBP18.77■□□□□ 0.6
TPM1-226ENST00000560959 HTR1BP28222 390 aa18.77■□□□□ 0.6
TPM1-226ENST00000560959 GKP32189 559 aa18.77■□□□□ 0.6
TPM1-226ENST00000560959 GABRB2P47870 512 aa18.77■□□□□ 0.6
TPM1-226ENST00000560959 SUOXP51687 545 aa18.77■□□□□ 0.6
TPM1-226ENST00000560959 RNASE9P60153 205 aaKnown RBP18.77■□□□□ 0.6
TPM1-226ENST00000560959 ARHGAP44Q17R89 818 aa18.77■□□□□ 0.6
TPM1-226ENST00000560959 KLHL10Q6JEL2 608 aa18.77■□□□□ 0.6
TPM1-226ENST00000560959 GJB7Q6PEY0 223 aa18.77■□□□□ 0.6
TPM1-226ENST00000560959 RYBPQ8N488 228 aaPredicted RBP18.77■□□□□ 0.6
TPM1-226ENST00000560959 GPR156Q8NFN8 814 aa18.77■□□□□ 0.6
TPM1-226ENST00000560959 ATL2Q8NHH9 583 aa18.77■□□□□ 0.6
TPM1-226ENST00000560959 CXorf40AQ8TE69 158 aa18.77■□□□□ 0.6
TPM1-226ENST00000560959 KLHL32Q96NJ5 620 aa18.77■□□□□ 0.6
TPM1-226ENST00000560959 EPAS1Q99814 870 aa18.77■□□□□ 0.6
TPM1-226ENST00000560959 SIRPGQ9P1W8 387 aa18.77■□□□□ 0.6
TPM1-226ENST00000560959 DKK3Q9UBP4 350 aa18.77■□□□□ 0.6
TPM1-226ENST00000560959 MAN1B1Q9UKM7 699 aa18.77■□□□□ 0.6
TPM1-226ENST00000560959 KRIT1O00522 736 aa18.76■□□□□ 0.59
TPM1-226ENST00000560959 FGFR1OPO95684 399 aaKnown RBP18.76■□□□□ 0.59
TPM1-226ENST00000560959 UGT2B4P06133 528 aa18.76■□□□□ 0.59
TPM1-226ENST00000560959 GLB1P16278 677 aa18.76■□□□□ 0.59
TPM1-226ENST00000560959 NRG1Q02297 640 aaPredicted RBP18.76■□□□□ 0.59
TPM1-226ENST00000560959 TLE1Q04724 770 aa18.76■□□□□ 0.59
TPM1-226ENST00000560959 UBAP2LQ14157 1087 aaKnown RBP18.76■□□□□ 0.59
TPM1-226ENST00000560959 KLHL40Q2TBA0 621 aa18.76■□□□□ 0.59
TPM1-226ENST00000560959 ISM2Q6H9L7 571 aa18.76■□□□□ 0.59
TPM1-226ENST00000560959 OGFOD3Q6PK18 319 aa18.76■□□□□ 0.59
TPM1-226ENST00000560959 GDPD4Q6W3E5 623 aa18.76■□□□□ 0.59
TPM1-226ENST00000560959 CCNJLQ8IV13 435 aa18.76■□□□□ 0.59
TPM1-226ENST00000560959 HID1Q8IV36 788 aa18.76■□□□□ 0.59
TPM1-226ENST00000560959 MAGEH1Q9H213 219 aa18.76■□□□□ 0.59
TPM1-226ENST00000560959 GDPD2Q9HCC8 539 aa18.76■□□□□ 0.59
TPM1-226ENST00000560959 TMPRSS4Q9NRS4 437 aa18.76■□□□□ 0.59
TPM1-226ENST00000560959 HPCAL4Q9UM19 191 aa18.76■□□□□ 0.59
TPM1-226ENST00000560959 ACTL7AQ9Y615 435 aa18.76■□□□□ 0.59
TPM1-226ENST00000560959 PRAMEF33A0A0G2JMD5 474 aa18.75■□□□□ 0.59
TPM1-226ENST00000560959 GOLGA6L4A6NEF3 574 aa18.75■□□□□ 0.59
TPM1-226ENST00000560959 PRAMEF10O60809 474 aa18.75■□□□□ 0.59
TPM1-226ENST00000560959 CDH5P33151 784 aaPredicted RBP18.75■□□□□ 0.59
TPM1-226ENST00000560959 MAPKAPK2P49137 400 aa18.75■□□□□ 0.59
TPM1-226ENST00000560959 RAD51Q06609 339 aa18.75■□□□□ 0.59
TPM1-226ENST00000560959 LRRC14Q15048 493 aa18.75■□□□□ 0.59
TPM1-226ENST00000560959 AGERQ15109 404 aa18.75■□□□□ 0.59
TPM1-226ENST00000560959 ALG11Q2TAA5 492 aa18.75■□□□□ 0.59
TPM1-226ENST00000560959 TMEM52BQ4KMG9 183 aa18.75■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms