RNA–Protein interactions for RNA: ENST00000559933.1

SPG11-220, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 2

Gene SPG11, Length 518 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-220ENST00000559933 TMEM215Q68D42 235 aa5.32□□□□□ -1.56
SPG11-220ENST00000559933 DARS2Q6PI48 645 aaKnown RBP5.32□□□□□ -1.56
SPG11-220ENST00000559933 CCDC137Q6PK04 289 aaKnown RBP5.32□□□□□ -1.56
SPG11-220ENST00000559933 OTOP3Q7RTS5 596 aa5.32□□□□□ -1.56
SPG11-220ENST00000559933 CTAGE6Q86UF2 777 aa5.32□□□□□ -1.56
SPG11-220ENST00000559933 MFSD6LQ8IWD5 586 aa5.32□□□□□ -1.56
SPG11-220ENST00000559933 CTAGE4Q8IX94 777 aa5.32□□□□□ -1.56
SPG11-220ENST00000559933 YAF2Q8IY57 180 aa5.32□□□□□ -1.56
SPG11-220ENST00000559933 ADGRG2Q8IZP9 1017 aa5.32□□□□□ -1.56
SPG11-220ENST00000559933 CPXM2Q8N436 756 aa5.32□□□□□ -1.56
SPG11-220ENST00000559933 ATPAF2Q8N5M1 289 aa5.32□□□□□ -1.56
SPG11-220ENST00000559933 ZNF366Q8N895 744 aa5.32□□□□□ -1.56
SPG11-220ENST00000559933 C2CD4AQ8NCU7 369 aaPredicted RBP5.32□□□□□ -1.56
SPG11-220ENST00000559933 CCNYQ8ND76 341 aa5.32□□□□□ -1.56
SPG11-220ENST00000559933 MNS1Q8NEH6 495 aa5.32□□□□□ -1.56
SPG11-220ENST00000559933 CCDC110Q8TBZ0 833 aa5.32□□□□□ -1.56
SPG11-220ENST00000559933 CYB5D2Q8WUJ1 264 aa5.32□□□□□ -1.56
SPG11-220ENST00000559933 ARHGEF2Q92974 986 aaKnown RBP5.32□□□□□ -1.56
SPG11-220ENST00000559933 AZIN2Q96A70 460 aa5.32□□□□□ -1.56
SPG11-220ENST00000559933 ELSPBP1Q96BH3 223 aa5.32□□□□□ -1.56
SPG11-220ENST00000559933 TMA16Q96EY4 203 aaKnown RBP5.32□□□□□ -1.56
SPG11-220ENST00000559933 EXOC2Q96KP1 924 aa5.32□□□□□ -1.56
SPG11-220ENST00000559933 LMLNQ96KR4 655 aa5.32□□□□□ -1.56
SPG11-220ENST00000559933 RPL10LQ96L21 214 aaKnown RBP5.32□□□□□ -1.56
SPG11-220ENST00000559933 NECTIN4Q96NY8 510 aa5.32□□□□□ -1.56
SPG11-220ENST00000559933 NECAB3Q96P71 396 aaPredicted RBP5.32□□□□□ -1.56
SPG11-220ENST00000559933 GORASP1Q9BQQ3 440 aa5.32□□□□□ -1.56
SPG11-220ENST00000559933 LRRC1Q9BTT6 524 aa5.32□□□□□ -1.56
SPG11-220ENST00000559933 PHF7Q9BWX1 381 aaPredicted RBP5.32□□□□□ -1.56
SPG11-220ENST00000559933 BRD8Q9H0E9 1235 aa5.32□□□□□ -1.56
SPG11-220ENST00000559933 DPH5Q9H2P9 285 aa5.32□□□□□ -1.56
SPG11-220ENST00000559933 MTG2Q9H4K7 406 aa5.32□□□□□ -1.56
SPG11-220ENST00000559933 CATSPERBQ9H7T0 1116 aa5.32□□□□□ -1.56
SPG11-220ENST00000559933 ECT2Q9H8V3 914 aa5.32□□□□□ -1.56
SPG11-220ENST00000559933 KIF9Q9HAQ2 790 aa5.32□□□□□ -1.56
SPG11-220ENST00000559933 KCNK12Q9HB15 430 aa5.32□□□□□ -1.56
SPG11-220ENST00000559933 DNAJC17Q9NVM6 304 aaKnown RBP5.32□□□□□ -1.56
SPG11-220ENST00000559933 POLR3BQ9NW08 1133 aaPredicted RBP5.32□□□□□ -1.56
SPG11-220ENST00000559933 TTLL3Q9Y4R7 772 aa5.32□□□□□ -1.56
SPG11-220ENST00000559933 TCF20Q9UGU0 1960 aaKnown RBP5.32□□□□□ -1.56
SPG11-220ENST00000559933 CHD5Q8TDI0 1954 aa5.31□□□□□ -1.56
SPG11-220ENST00000559933 TRIOO75962 3097 aa5.31□□□□□ -1.56
SPG11-220ENST00000559933 GOLGA6L10A0A0M3HER8 536 aa5.31□□□□□ -1.56
SPG11-220ENST00000559933 TMEM238LA0A1B0GVL6 79 aa5.31□□□□□ -1.56
SPG11-220ENST00000559933 TCRBV7S3A2A0A539 114 aa5.31□□□□□ -1.56
SPG11-220ENST00000559933 PRRT4C9JH25 899 aa5.31□□□□□ -1.56
SPG11-220ENST00000559933 SGK1O00141 431 aa5.31□□□□□ -1.56
SPG11-220ENST00000559933 RNF103O00237 685 aa5.31□□□□□ -1.56
SPG11-220ENST00000559933 SMAD6O43541 496 aaKnown RBP5.31□□□□□ -1.56
SPG11-220ENST00000559933 MAFKO60675 156 aa5.31□□□□□ -1.56
SPG11-220ENST00000559933 TULP3O75386 442 aa5.31□□□□□ -1.56
SPG11-220ENST00000559933 CLDN11O75508 207 aa5.31□□□□□ -1.56
SPG11-220ENST00000559933 ECI2O75521 394 aa5.31□□□□□ -1.56
SPG11-220ENST00000559933 SLU7O95391 586 aaKnown RBP5.31□□□□□ -1.56
SPG11-220ENST00000559933 WNT11O96014 354 aa5.31□□□□□ -1.56
SPG11-220ENST00000559933 MT-CO1P00395 513 aa5.31□□□□□ -1.56
SPG11-220ENST00000559933 TUBB4AP04350 444 aa5.31□□□□□ -1.56
SPG11-220ENST00000559933 CYBBP04839 570 aa5.31□□□□□ -1.56
SPG11-220ENST00000559933 HLA-DQB2P05538 268 aa5.31□□□□□ -1.56
SPG11-220ENST00000559933 CISD3P0C7P0 127 aa5.31□□□□□ -1.56
SPG11-220ENST00000559933 PABPC1P11940 636 aaKnown RBP5.31□□□□□ -1.56
SPG11-220ENST00000559933 ZFXP17010 805 aaPredicted RBP5.31□□□□□ -1.56
SPG11-220ENST00000559933 PSMC3P17980 439 aa5.31□□□□□ -1.56
SPG11-220ENST00000559933 RAB6AP20340 208 aa5.31□□□□□ -1.56
SPG11-220ENST00000559933 CD72P21854 359 aa5.31□□□□□ -1.56
SPG11-220ENST00000559933 PTPN3P26045 913 aa5.31□□□□□ -1.56
SPG11-220ENST00000559933 PSMB4P28070 264 aa5.31□□□□□ -1.56
SPG11-220ENST00000559933 GKP32189 559 aa5.31□□□□□ -1.56
SPG11-220ENST00000559933 CHKAP35790 457 aa5.31□□□□□ -1.56
SPG11-220ENST00000559933 OPRD1P41143 372 aa5.31□□□□□ -1.56
SPG11-220ENST00000559933 CETN2P41208 172 aa5.31□□□□□ -1.56
SPG11-220ENST00000559933 RGRP47804 291 aa5.31□□□□□ -1.56
SPG11-220ENST00000559933 HCAR3P49019 387 aa5.31□□□□□ -1.56
SPG11-220ENST00000559933 MAPKAPK2P49137 400 aa5.31□□□□□ -1.56
SPG11-220ENST00000559933 MAXP61244 160 aa5.31□□□□□ -1.56
SPG11-220ENST00000559933 ARF5P84085 180 aa5.31□□□□□ -1.56
SPG11-220ENST00000559933 DR1Q01658 176 aa5.31□□□□□ -1.56
SPG11-220ENST00000559933 SLC10A7Q0GE19 358 aa5.31□□□□□ -1.56
SPG11-220ENST00000559933 FCHO2Q0JRZ9 810 aa5.31□□□□□ -1.56
SPG11-220ENST00000559933 WASHC5Q12768 1159 aa5.31□□□□□ -1.56
SPG11-220ENST00000559933 SERINC3Q13530 473 aa5.31□□□□□ -1.56
SPG11-220ENST00000559933 RUNX3Q13761 415 aa5.31□□□□□ -1.56
SPG11-220ENST00000559933 BYSLQ13895 437 aaKnown RBP5.31□□□□□ -1.56
SPG11-220ENST00000559933 IHHQ14623 411 aa5.31□□□□□ -1.56
SPG11-220ENST00000559933 ELF2Q15723 593 aa5.31□□□□□ -1.56
SPG11-220ENST00000559933 CCNG2Q16589 344 aa5.31□□□□□ -1.56
SPG11-220ENST00000559933 CYP1B1Q16678 543 aa5.31□□□□□ -1.56
SPG11-220ENST00000559933 MPPE1Q53F39 396 aa5.31□□□□□ -1.56
SPG11-220ENST00000559933 SLC45A4Q5BKX6 768 aa5.31□□□□□ -1.56
SPG11-220ENST00000559933 RPS26P11Q5JNZ5 115 aaPredicted RBP5.31□□□□□ -1.56
SPG11-220ENST00000559933 PITRM1Q5JRX3 1037 aa5.31□□□□□ -1.56
SPG11-220ENST00000559933 ATXN7L2Q5T6C5 722 aaPredicted RBP5.31□□□□□ -1.56
SPG11-220ENST00000559933 UBAP2Q5T6F2 1119 aaKnown RBP5.31□□□□□ -1.56
SPG11-220ENST00000559933 ANKRD22Q5VYY1 191 aa5.31□□□□□ -1.56
SPG11-220ENST00000559933 IL31Q6EBC2 164 aa5.31□□□□□ -1.56
SPG11-220ENST00000559933 CDPF1Q6NVV7 123 aa5.31□□□□□ -1.56
SPG11-220ENST00000559933 C8orf74Q6P047 294 aa5.31□□□□□ -1.56
SPG11-220ENST00000559933 CHST9Q7L1S5 443 aa5.31□□□□□ -1.56
SPG11-220ENST00000559933 GSTA5Q7RTV2 222 aa5.31□□□□□ -1.56
SPG11-220ENST00000559933 VSIG1Q86XK7 387 aa5.31□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms