RNA–Protein interactions for RNA: ENST00000559192.5

USP3-210, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 1 (best)

Gene USP3, Length 5,499 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-210ENST00000559192 COX4I2Q96KJ9 171 aa7.17□□□□□ -1.26
USP3-210ENST00000559192 OSBPL10Q9BXB5 764 aa7.17□□□□□ -1.26
USP3-210ENST00000559192 TKTL2Q9H0I9 626 aa7.17□□□□□ -1.26
USP3-210ENST00000559192 C1orf21Q9H246 121 aa7.17□□□□□ -1.26
USP3-210ENST00000559192 SYNPO2Q9UMS6 1093 aa7.17□□□□□ -1.26
USP3-210ENST00000559192 PKP3Q9Y446 797 aa7.17□□□□□ -1.26
USP3-210ENST00000559192 FARP1Q9Y4F1 1045 aaPredicted RBP7.17□□□□□ -1.26
USP3-210ENST00000559192 WNT10BO00744 389 aa7.17□□□□□ -1.26
USP3-210ENST00000559192 KLF11O14901 512 aa7.17□□□□□ -1.26
USP3-210ENST00000559192 DHX15O43143 795 aaKnown RBP7.17□□□□□ -1.26
USP3-210ENST00000559192 PEX10O60683 326 aa7.17□□□□□ -1.26
USP3-210ENST00000559192 BAG6P46379 1132 aa7.17□□□□□ -1.26
USP3-210ENST00000559192 MPP1Q00013 466 aa7.17□□□□□ -1.26
USP3-210ENST00000559192 ITGA7Q13683 1181 aa7.17□□□□□ -1.26
USP3-210ENST00000559192 TLR1Q15399 786 aa7.17□□□□□ -1.26
USP3-210ENST00000559192 CARTPTQ16568 116 aa7.17□□□□□ -1.26
USP3-210ENST00000559192 BROXQ5VW32 411 aa7.17□□□□□ -1.26
USP3-210ENST00000559192 THOC7Q6I9Y2 204 aaKnown RBP7.17□□□□□ -1.26
USP3-210ENST00000559192 PMF1Q6P1K2 205 aa7.17□□□□□ -1.26
USP3-210ENST00000559192 ZYG11AQ6WRX3 759 aa7.17□□□□□ -1.26
USP3-210ENST00000559192 CUZD1Q86UP6 607 aa7.17□□□□□ -1.26
USP3-210ENST00000559192 C8orf59Q8N0T1 100 aaPredicted RBP7.17□□□□□ -1.26
USP3-210ENST00000559192 FNIP1Q8TF40 1166 aa7.17□□□□□ -1.26
USP3-210ENST00000559192 CLEC4CQ8WTT0 213 aa7.17□□□□□ -1.26
USP3-210ENST00000559192 GATA5Q9BWX5 397 aaPredicted RBP7.17□□□□□ -1.26
USP3-210ENST00000559192 EPS8L2Q9H6S3 715 aa7.17□□□□□ -1.26
USP3-210ENST00000559192 MFHAS1Q9Y4C4 1052 aa7.17□□□□□ -1.26
USP3-210ENST00000559192 TRIM17Q9Y577 477 aa7.17□□□□□ -1.26
USP3-210ENST00000559192 NFASCO94856 1347 aa7.17□□□□□ -1.26
USP3-210ENST00000559192 KANSL1LA0AUZ9 987 aa7.17□□□□□ -1.26
USP3-210ENST00000559192 TMEM233B4DJY2 109 aa7.17□□□□□ -1.26
USP3-210ENST00000559192 SPATA31C2B4DYI2 1134 aa7.17□□□□□ -1.26
USP3-210ENST00000559192 MAGEB3O15480 346 aa7.17□□□□□ -1.26
USP3-210ENST00000559192 MTRF1O75570 445 aaKnown RBP7.17□□□□□ -1.26
USP3-210ENST00000559192 GCATO75600 419 aa7.17□□□□□ -1.26
USP3-210ENST00000559192 LTA4HP09960 611 aaKnown RBP7.17□□□□□ -1.26
USP3-210ENST00000559192 HSMCR30P0CW71 290 aa7.17□□□□□ -1.26
USP3-210ENST00000559192 ALOX12P18054 663 aa7.17□□□□□ -1.26
USP3-210ENST00000559192 PCLAFQ15004 111 aa7.17□□□□□ -1.26
USP3-210ENST00000559192 CMPK2Q5EBM0 449 aa7.17□□□□□ -1.26
USP3-210ENST00000559192 PAOXQ6QHF9 649 aa7.17□□□□□ -1.26
USP3-210ENST00000559192 RRM2BQ7LG56 351 aa7.17□□□□□ -1.26
USP3-210ENST00000559192 SYTL1Q8IYJ3 562 aa7.17□□□□□ -1.26
USP3-210ENST00000559192 RDH11Q8TC12 318 aa7.17□□□□□ -1.26
USP3-210ENST00000559192 OSMRQ99650 979 aa7.17□□□□□ -1.26
USP3-210ENST00000559192 ZFYVE28Q9HCC9 887 aa7.17□□□□□ -1.26
USP3-210ENST00000559192 TRHDEQ9UKU6 1024 aa7.17□□□□□ -1.26
USP3-210ENST00000559192 NUP98P52948 1817 aa7.17□□□□□ -1.26
USP3-210ENST00000559192 BTN3A3O00478 584 aa7.17□□□□□ -1.26
USP3-210ENST00000559192 NCAM2O15394 837 aa7.17□□□□□ -1.26
USP3-210ENST00000559192 MED26O95402 600 aa7.17□□□□□ -1.26
USP3-210ENST00000559192 GLP2RO95838 553 aa7.17□□□□□ -1.26
USP3-210ENST00000559192 TFPTP0C1Z6 253 aa7.17□□□□□ -1.26
USP3-210ENST00000559192 TFEBP19484 476 aa7.17□□□□□ -1.26
USP3-210ENST00000559192 ATP5F1P24539 256 aaPredicted RBP7.17□□□□□ -1.26
USP3-210ENST00000559192 MRPS5P82675 430 aaKnown RBP7.17□□□□□ -1.26
USP3-210ENST00000559192 LGALS3BPQ08380 585 aa7.17□□□□□ -1.26
USP3-210ENST00000559192 INSCQ1MX18 579 aa7.17□□□□□ -1.26
USP3-210ENST00000559192 OTOP3Q7RTS5 596 aa7.17□□□□□ -1.26
USP3-210ENST00000559192 DNERQ8NFT8 737 aa7.17□□□□□ -1.26
USP3-210ENST00000559192 CITED4Q96RK1 184 aa7.17□□□□□ -1.26
USP3-210ENST00000559192 PEBP4Q96S96 227 aa7.17□□□□□ -1.26
USP3-210ENST00000559192 TMEM161AQ9NX61 479 aa7.17□□□□□ -1.26
USP3-210ENST00000559192 SIPA1L3O60292 1781 aaPredicted RBP7.17□□□□□ -1.26
USP3-210ENST00000559192 C10orf71Q711Q0 1435 aa7.17□□□□□ -1.26
USP3-210ENST00000559192 C2CD4BA6NLJ0 364 aa7.17□□□□□ -1.26
USP3-210ENST00000559192 RFPL1O75677 317 aa7.17□□□□□ -1.26
USP3-210ENST00000559192 NCK1P16333 377 aa7.17□□□□□ -1.26
USP3-210ENST00000559192 CDH13P55290 713 aa7.17□□□□□ -1.26
USP3-210ENST00000559192 TUBA3CQ13748 450 aa7.17□□□□□ -1.26
USP3-210ENST00000559192 TMEM132BQ14DG7 1078 aa7.17□□□□□ -1.26
USP3-210ENST00000559192 PCID2Q5JVF3 399 aa7.17□□□□□ -1.26
USP3-210ENST00000559192 TUBA3EQ6PEY2 450 aa7.17□□□□□ -1.26
USP3-210ENST00000559192 C11orf88Q6PI97 169 aa7.17□□□□□ -1.26
USP3-210ENST00000559192 TAF8Q7Z7C8 310 aa7.17□□□□□ -1.26
USP3-210ENST00000559192 TMEM110Q86TL2 294 aa7.17□□□□□ -1.26
USP3-210ENST00000559192 KIAA0319LQ8IZA0 1049 aa7.17□□□□□ -1.26
USP3-210ENST00000559192 PTGR2Q8N8N7 351 aaPredicted RBP7.17□□□□□ -1.26
USP3-210ENST00000559192 REPS2Q8NFH8 660 aa7.17□□□□□ -1.26
USP3-210ENST00000559192 ENKURQ8TC29 256 aa7.17□□□□□ -1.26
USP3-210ENST00000559192 TSPAN18Q96SJ8 248 aa7.17□□□□□ -1.26
USP3-210ENST00000559192 OXCT2Q9BYC2 517 aaPredicted RBP7.17□□□□□ -1.26
USP3-210ENST00000559192 ASB7Q9H672 318 aa7.17□□□□□ -1.26
USP3-210ENST00000559192 KCNK13Q9HB14 408 aa7.17□□□□□ -1.26
USP3-210ENST00000559192 RPRD1BQ9NQG5 326 aaKnown RBP7.17□□□□□ -1.26
USP3-210ENST00000559192 DDX43Q9NXZ2 648 aaKnown RBP7.17□□□□□ -1.26
USP3-210ENST00000559192 CIDEBQ9UHD4 219 aa7.17□□□□□ -1.26
USP3-210ENST00000559192 TRMT6Q9UJA5 497 aaKnown RBP7.17□□□□□ -1.26
USP3-210ENST00000559192 PNMA8BQ9ULN7 279 aaPredicted RBP7.17□□□□□ -1.26
USP3-210ENST00000559192 TELO2Q9Y4R8 837 aa7.17□□□□□ -1.26
USP3-210ENST00000559192 ASB3Q9Y575 518 aa7.17□□□□□ -1.26
USP3-210ENST00000559192 FAM159BA6NKW6 160 aa7.16□□□□□ -1.26
USP3-210ENST00000559192 DYNC1LI2O43237 492 aaPredicted RBP7.16□□□□□ -1.26
USP3-210ENST00000559192 CYP2C9P11712 490 aa7.16□□□□□ -1.26
USP3-210ENST00000559192 ATF4P18848 351 aaPredicted RBP7.16□□□□□ -1.26
USP3-210ENST00000559192 NMBRP28336 390 aa7.16□□□□□ -1.26
USP3-210ENST00000559192 CCR1P32246 355 aa7.16□□□□□ -1.26
USP3-210ENST00000559192 PTGS2P35354 604 aa7.16□□□□□ -1.26
USP3-210ENST00000559192 PNPLA4P41247 253 aa7.16□□□□□ -1.26
USP3-210ENST00000559192 YAP1P46937 504 aaKnown RBP7.16□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 74 ms