RNA–Protein interactions for RNA: ENST00000558400.1

TPM1-213, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 658 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-213ENST00000558400 HORMAD1Q86X24 394 aa8.59□□□□□ -1.03
TPM1-213ENST00000558400 DCP2Q8IU60 420 aaKnown RBP8.59□□□□□ -1.03
TPM1-213ENST00000558400 MINDY1Q8N5J2 469 aa8.59□□□□□ -1.03
TPM1-213ENST00000558400 ASB12Q8WXK4 309 aa8.59□□□□□ -1.03
TPM1-213ENST00000558400 ARRDC3Q96B67 414 aa8.59□□□□□ -1.03
TPM1-213ENST00000558400 KLHL32Q96NJ5 620 aa8.59□□□□□ -1.03
TPM1-213ENST00000558400 TSGA13Q96PP4 275 aa8.59□□□□□ -1.03
TPM1-213ENST00000558400 RNF157Q96PX1 679 aa8.59□□□□□ -1.03
TPM1-213ENST00000558400 BAG1Q99933 345 aaPredicted RBP8.59□□□□□ -1.03
TPM1-213ENST00000558400 CINPQ9BW66 212 aaPredicted RBP8.59□□□□□ -1.03
TPM1-213ENST00000558400 SUV39H2Q9H5I1 410 aa8.59□□□□□ -1.03
TPM1-213ENST00000558400 ATP13A3Q9H7F0 1226 aa8.59□□□□□ -1.03
TPM1-213ENST00000558400 AASDHPPTQ9NRN7 309 aa8.59□□□□□ -1.03
TPM1-213ENST00000558400 AMACRQ9UHK6 382 aa8.59□□□□□ -1.03
TPM1-213ENST00000558400 ANKRD6Q9Y2G4 727 aa8.59□□□□□ -1.03
TPM1-213ENST00000558400 SBDSQ9Y3A5 250 aaKnown RBP eCLIP8.59□□□□□ -1.03
TPM1-213ENST00000558400 FADS3Q9Y5Q0 445 aa8.59□□□□□ -1.03
TPM1-213ENST00000558400 ACTL7AQ9Y615 435 aa8.59□□□□□ -1.03
TPM1-213ENST00000558400 HS3ST3A1Q9Y663 406 aa8.59□□□□□ -1.03
TPM1-213ENST00000558400 ALG6Q9Y672 507 aa8.59□□□□□ -1.03
TPM1-213ENST00000558400 NUP205Q92621 2012 aa8.59□□□□□ -1.03
TPM1-213ENST00000558400 IGF2RP11717 2491 aa8.59□□□□□ -1.03
TPM1-213ENST00000558400 CEP295Q9C0D2 2601 aa8.59□□□□□ -1.03
TPM1-213ENST00000558400 PI4KAP42356 2102 aa8.59□□□□□ -1.03
TPM1-213ENST00000558400 FRYQ5TBA9 3013 aa8.58□□□□□ -1.04
TPM1-213ENST00000558400 A0A1B0GVT2 93 aa8.58□□□□□ -1.04
TPM1-213ENST00000558400 A0A1W2PQU0 124 aa8.58□□□□□ -1.04
TPM1-213ENST00000558400 BTNL10A8MVZ5 291 aa8.58□□□□□ -1.04
TPM1-213ENST00000558400 TLR4O00206 839 aa8.58□□□□□ -1.04
TPM1-213ENST00000558400 PLK4O00444 970 aa8.58□□□□□ -1.04
TPM1-213ENST00000558400 YKT6O15498 198 aa8.58□□□□□ -1.04
TPM1-213ENST00000558400 SPOPO43791 374 aa8.58□□□□□ -1.04
TPM1-213ENST00000558400 MAFKO60675 156 aa8.58□□□□□ -1.04
TPM1-213ENST00000558400 UGT2B4P06133 528 aa8.58□□□□□ -1.04
TPM1-213ENST00000558400 SERPINA4P29622 427 aa8.58□□□□□ -1.04
TPM1-213ENST00000558400 AKT2P31751 481 aa8.58□□□□□ -1.04
TPM1-213ENST00000558400 METAP1P53582 386 aa8.58□□□□□ -1.04
TPM1-213ENST00000558400 GSDMDP57764 484 aa8.58□□□□□ -1.04
TPM1-213ENST00000558400 TAS2R38P59533 333 aa8.58□□□□□ -1.04
TPM1-213ENST00000558400 TAS2R40P59535 323 aa8.58□□□□□ -1.04
TPM1-213ENST00000558400 AP1S1P61966 158 aa8.58□□□□□ -1.04
TPM1-213ENST00000558400 BCL2L1Q07817 233 aa8.58□□□□□ -1.04
TPM1-213ENST00000558400 ELP6Q0PNE2 266 aa8.58□□□□□ -1.04
TPM1-213ENST00000558400 GRIK2Q13002 908 aa8.58□□□□□ -1.04
TPM1-213ENST00000558400 MMRN1Q13201 1228 aa8.58□□□□□ -1.04
TPM1-213ENST00000558400 ZNF235Q14590 738 aa8.58□□□□□ -1.04
TPM1-213ENST00000558400 IFI16Q16666 785 aaKnown RBP8.58□□□□□ -1.04
TPM1-213ENST00000558400 HLA-BQ31612 363 aa8.58□□□□□ -1.04
TPM1-213ENST00000558400 ATXN7L2Q5T6C5 722 aaPredicted RBP8.58□□□□□ -1.04
TPM1-213ENST00000558400 RCOR2Q8IZ40 523 aa8.58□□□□□ -1.04
TPM1-213ENST00000558400 OXR1Q8N573 874 aa8.58□□□□□ -1.04
TPM1-213ENST00000558400 ATPAF2Q8N5M1 289 aa8.58□□□□□ -1.04
TPM1-213ENST00000558400 NPWQ8N729 165 aa8.58□□□□□ -1.04
TPM1-213ENST00000558400 TSEN2Q8NCE0 465 aaKnown RBP8.58□□□□□ -1.04
TPM1-213ENST00000558400 PCDH19Q8TAB3 1148 aa8.58□□□□□ -1.04
TPM1-213ENST00000558400 TRAF3IP1Q8TDR0 691 aaPredicted RBP8.58□□□□□ -1.04
TPM1-213ENST00000558400 FATE1Q969F0 183 aa8.58□□□□□ -1.04
TPM1-213ENST00000558400 FAF2Q96CS3 445 aa8.58□□□□□ -1.04
TPM1-213ENST00000558400 ZNF830Q96NB3 372 aaPredicted RBP8.58□□□□□ -1.04
TPM1-213ENST00000558400 LENG8Q96PV6 779 aaPredicted RBP8.58□□□□□ -1.04
TPM1-213ENST00000558400 ORAI3Q9BRQ5 295 aa8.58□□□□□ -1.04
TPM1-213ENST00000558400 C1QTNF7Q9BXJ2 289 aa8.58□□□□□ -1.04
TPM1-213ENST00000558400 SLC17A9Q9BYT1 436 aa8.58□□□□□ -1.04
TPM1-213ENST00000558400 BRD8Q9H0E9 1235 aa8.58□□□□□ -1.04
TPM1-213ENST00000558400 GAREM1Q9H706 876 aa8.58□□□□□ -1.04
TPM1-213ENST00000558400 ERVMER34-1Q9H9K5 563 aa8.58□□□□□ -1.04
TPM1-213ENST00000558400 ETNK2Q9NVF9 386 aa8.58□□□□□ -1.04
TPM1-213ENST00000558400 LHX3Q9UBR4 397 aa8.58□□□□□ -1.04
TPM1-213ENST00000558400 PCDHGB2Q9Y5G2 931 aa8.58□□□□□ -1.04
TPM1-213ENST00000558400 MUC22E2RYF6 1773 aaPredicted RBP8.58□□□□□ -1.04
TPM1-213ENST00000558400 NUMA1Q14980 2115 aa8.57□□□□□ -1.04
TPM1-213ENST00000558400 LRRD1A4D1F6 860 aa8.57□□□□□ -1.04
TPM1-213ENST00000558400 CFAP69A5D8W1 941 aa8.57□□□□□ -1.04
TPM1-213ENST00000558400 TOR1BO14657 336 aa8.57□□□□□ -1.04
TPM1-213ENST00000558400 AREL1O15033 823 aa8.57□□□□□ -1.04
TPM1-213ENST00000558400 SNPHO15079 494 aa8.57□□□□□ -1.04
TPM1-213ENST00000558400 MATN3O15232 486 aa8.57□□□□□ -1.04
TPM1-213ENST00000558400 SLC31A1O15431 190 aa8.57□□□□□ -1.04
TPM1-213ENST00000558400 PSTPIP1O43586 416 aa8.57□□□□□ -1.04
TPM1-213ENST00000558400 GJB3O75712 270 aa8.57□□□□□ -1.04
TPM1-213ENST00000558400 NEBLO76041 1014 aa8.57□□□□□ -1.04
TPM1-213ENST00000558400 ZRANB2O95218 330 aaKnown RBP eCLIP8.57□□□□□ -1.04
TPM1-213ENST00000558400 CD48P09326 243 aa8.57□□□□□ -1.04
TPM1-213ENST00000558400 KRT10P13645 584 aa8.57□□□□□ -1.04
TPM1-213ENST00000558400 TIMP2P16035 220 aa8.57□□□□□ -1.04
TPM1-213ENST00000558400 COMTP21964 271 aa8.57□□□□□ -1.04
TPM1-213ENST00000558400 HNRNPA2B1P22626 353 aaKnown RBP8.57□□□□□ -1.04
TPM1-213ENST00000558400 MAT2AP31153 395 aaKnown RBP8.57□□□□□ -1.04
TPM1-213ENST00000558400 GKP32189 559 aa8.57□□□□□ -1.04
TPM1-213ENST00000558400 GJC1P36383 396 aa8.57□□□□□ -1.04
TPM1-213ENST00000558400 CETN2P41208 172 aa8.57□□□□□ -1.04
TPM1-213ENST00000558400 GARSP41250 739 aaKnown RBP8.57□□□□□ -1.04
TPM1-213ENST00000558400 CTSKP43235 329 aa8.57□□□□□ -1.04
TPM1-213ENST00000558400 MMP13P45452 471 aa8.57□□□□□ -1.04
TPM1-213ENST00000558400 NR2C2P49116 596 aa8.57□□□□□ -1.04
TPM1-213ENST00000558400 ARRB1P49407 418 aaPredicted RBP8.57□□□□□ -1.04
TPM1-213ENST00000558400 SCNN1BP51168 640 aa8.57□□□□□ -1.04
TPM1-213ENST00000558400 NAP1L1P55209 391 aaKnown RBP8.57□□□□□ -1.04
TPM1-213ENST00000558400 SLC10A7Q0GE19 358 aa8.57□□□□□ -1.04
TPM1-213ENST00000558400 GALNT2Q10471 571 aa8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms