RNA–Protein interactions for RNA: ENST00000558394.5

TSPAN3-204, Transcript of tetraspanin 3, humanhuman

TSL 4

Gene TSPAN3, Length 550 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-204ENST00000558394 PNMA8BQ9ULN7 279 aaPredicted RBP18.07■□□□□ 0.48
TSPAN3-204ENST00000558394 DOCK4Q8N1I0 1966 aa18.07■□□□□ 0.48
TSPAN3-204ENST00000558394 UGT2B4P06133 528 aa18.06■□□□□ 0.48
TSPAN3-204ENST00000558394 GEMIN4P57678 1058 aaKnown RBP18.06■□□□□ 0.48
TSPAN3-204ENST00000558394 RNASE9P60153 205 aaKnown RBP18.06■□□□□ 0.48
TSPAN3-204ENST00000558394 SNRPD1P62314 119 aaKnown RBP18.06■□□□□ 0.48
TSPAN3-204ENST00000558394 ARF5P84085 180 aa18.06■□□□□ 0.48
TSPAN3-204ENST00000558394 GNA12Q03113 381 aa18.06■□□□□ 0.48
TSPAN3-204ENST00000558394 DEUP1Q05D60 604 aa18.06■□□□□ 0.48
TSPAN3-204ENST00000558394 PHF19Q5T6S3 580 aa18.06■□□□□ 0.48
TSPAN3-204ENST00000558394 ENPP7Q6UWV6 458 aa18.06■□□□□ 0.48
TSPAN3-204ENST00000558394 OLFML1Q6UWY5 402 aa18.06■□□□□ 0.48
TSPAN3-204ENST00000558394 SLC26A9Q7LBE3 791 aa18.06■□□□□ 0.48
TSPAN3-204ENST00000558394 PLPP6Q8IY26 295 aa18.06■□□□□ 0.48
TSPAN3-204ENST00000558394 ZNF683Q8IZ20 524 aa18.06■□□□□ 0.48
TSPAN3-204ENST00000558394 ATL2Q8NHH9 583 aa18.06■□□□□ 0.48
TSPAN3-204ENST00000558394 SMARCE1Q969G3 411 aa18.06■□□□□ 0.48
TSPAN3-204ENST00000558394 TSACCQ96A04 125 aaPredicted RBP18.06■□□□□ 0.48
TSPAN3-204ENST00000558394 ISG20Q96AZ6 181 aaKnown RBP18.06■□□□□ 0.48
TSPAN3-204ENST00000558394 FAM81BQ96LP2 452 aa18.06■□□□□ 0.48
TSPAN3-204ENST00000558394 EPAS1Q99814 870 aa18.06■□□□□ 0.48
TSPAN3-204ENST00000558394 FUCA2Q9BTY2 467 aa18.06■□□□□ 0.48
TSPAN3-204ENST00000558394 TMEM51Q9NW97 253 aa18.06■□□□□ 0.48
TSPAN3-204ENST00000558394 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP18.06■□□□□ 0.48
TSPAN3-204ENST00000558394 FOXJ2Q9P0K8 574 aa18.06■□□□□ 0.48
TSPAN3-204ENST00000558394 CHD5Q8TDI0 1954 aa18.06■□□□□ 0.48
TSPAN3-204ENST00000558394 MMP20O60882 483 aa18.05■□□□□ 0.48
TSPAN3-204ENST00000558394 ZMPSTE24O75844 475 aa18.05■□□□□ 0.48
TSPAN3-204ENST00000558394 GKP32189 559 aa18.05■□□□□ 0.48
TSPAN3-204ENST00000558394 ETFBP38117 255 aa18.05■□□□□ 0.48
TSPAN3-204ENST00000558394 PEX5P50542 639 aa18.05■□□□□ 0.48
TSPAN3-204ENST00000558394 ATP1A2P50993 1020 aa18.05■□□□□ 0.48
TSPAN3-204ENST00000558394 SKIDA1Q1XH10 827 aa18.05■□□□□ 0.48
TSPAN3-204ENST00000558394 HTR3CQ8WXA8 447 aa18.05■□□□□ 0.48
TSPAN3-204ENST00000558394 DHTKD1Q96HY7 919 aaPredicted RBP18.05■□□□□ 0.48
TSPAN3-204ENST00000558394 KLHL32Q96NJ5 620 aa18.05■□□□□ 0.48
TSPAN3-204ENST00000558394 ZYG11BQ9C0D3 744 aa18.05■□□□□ 0.48
TSPAN3-204ENST00000558394 EPN3Q9H201 632 aa18.05■□□□□ 0.48
TSPAN3-204ENST00000558394 ANLNQ9NQW6 1124 aa18.05■□□□□ 0.48
TSPAN3-204ENST00000558394 MBNL1Q9NR56 388 aaKnown RBP18.05■□□□□ 0.48
TSPAN3-204ENST00000558394 HPCAL4Q9UM19 191 aa18.05■□□□□ 0.48
TSPAN3-204ENST00000558394 IGLV3-10A0A075B6K4 115 aa18.04■□□□□ 0.48
TSPAN3-204ENST00000558394 STMND1H3BQB6 276 aa18.04■□□□□ 0.48
TSPAN3-204ENST00000558394 POP4O95707 220 aaKnown RBP18.04■□□□□ 0.48
TSPAN3-204ENST00000558394 GLB1P16278 677 aa18.04■□□□□ 0.48
TSPAN3-204ENST00000558394 WT1P19544 449 aaPredicted RBP18.04■□□□□ 0.48
TSPAN3-204ENST00000558394 CR2P20023 1033 aa18.04■□□□□ 0.48
TSPAN3-204ENST00000558394 XPAP23025 273 aaPredicted RBP18.04■□□□□ 0.48
TSPAN3-204ENST00000558394 PPP1R2P41236 205 aa18.04■□□□□ 0.48
TSPAN3-204ENST00000558394 RAD51Q06609 339 aa18.04■□□□□ 0.48
TSPAN3-204ENST00000558394 ZFP36L1Q07352 338 aaKnown RBP18.04■□□□□ 0.48
TSPAN3-204ENST00000558394 KCNAB2Q13303 367 aa18.04■□□□□ 0.48
TSPAN3-204ENST00000558394 SERINC3Q13530 473 aa18.04■□□□□ 0.48
TSPAN3-204ENST00000558394 ARHGEF7Q14155 803 aa18.04■□□□□ 0.48
TSPAN3-204ENST00000558394 ARHGAP44Q17R89 818 aa18.04■□□□□ 0.48
TSPAN3-204ENST00000558394 KLHL40Q2TBA0 621 aa18.04■□□□□ 0.48
TSPAN3-204ENST00000558394 DTX1Q86Y01 620 aa18.04■□□□□ 0.48
TSPAN3-204ENST00000558394 ZDHHC17Q8IUH5 632 aa18.04■□□□□ 0.48
TSPAN3-204ENST00000558394 DRC7Q8IY82 874 aa18.04■□□□□ 0.48
TSPAN3-204ENST00000558394 WDTC1Q8N5D0 677 aa18.04■□□□□ 0.48
TSPAN3-204ENST00000558394 C1orf131Q8NDD1 294 aaKnown RBP18.04■□□□□ 0.48
TSPAN3-204ENST00000558394 OR2AP1Q8NGE2 309 aa18.04■□□□□ 0.48
TSPAN3-204ENST00000558394 NPY6RQ99463 290 aa18.04■□□□□ 0.48
TSPAN3-204ENST00000558394 KLQ9UEF7 1012 aa18.04■□□□□ 0.48
TSPAN3-204ENST00000558394 HOOK1Q9UJC3 728 aaKnown RBP18.04■□□□□ 0.48
TSPAN3-204ENST00000558394 UTP18Q9Y5J1 556 aaKnown RBP eCLIP18.04■□□□□ 0.48
TSPAN3-204ENST00000558394 RNF215Q9Y6U7 377 aa18.04■□□□□ 0.48
TSPAN3-204ENST00000558394 ZFC3H1O60293 1989 aaKnown RBP18.03■□□□□ 0.48
TSPAN3-204ENST00000558394 AREL1O15033 823 aa18.03■□□□□ 0.48
TSPAN3-204ENST00000558394 GSRP00390 522 aa18.03■□□□□ 0.48
TSPAN3-204ENST00000558394 TNFP01375 233 aa18.03■□□□□ 0.48
TSPAN3-204ENST00000558394 ERBB2P04626 1255 aa18.03■□□□□ 0.48
TSPAN3-204ENST00000558394 KRT9P35527 623 aa18.03■□□□□ 0.48
TSPAN3-204ENST00000558394 ETV5P41161 510 aa18.03■□□□□ 0.48
TSPAN3-204ENST00000558394 SRP54P61011 504 aaKnown RBP18.03■□□□□ 0.48
TSPAN3-204ENST00000558394 C1QBPQ07021 282 aaKnown RBP18.03■□□□□ 0.48
TSPAN3-204ENST00000558394 LRRC14Q15048 493 aa18.03■□□□□ 0.48
TSPAN3-204ENST00000558394 IRF4Q15306 451 aa18.03■□□□□ 0.48
TSPAN3-204ENST00000558394 ALG11Q2TAA5 492 aa18.03■□□□□ 0.48
TSPAN3-204ENST00000558394 MAP9Q49MG5 647 aa18.03■□□□□ 0.48
TSPAN3-204ENST00000558394 C4orf17Q53FE4 359 aa18.03■□□□□ 0.48
TSPAN3-204ENST00000558394 LRRC73Q5JTD7 316 aa18.03■□□□□ 0.48
TSPAN3-204ENST00000558394 TP53I13Q8NBR0 393 aaPredicted RBP18.03■□□□□ 0.48
TSPAN3-204ENST00000558394 ZNF397Q8NF99 534 aaPredicted RBP18.03■□□□□ 0.48
TSPAN3-204ENST00000558394 JPH3Q8WXH2 748 aaPredicted RBP18.03■□□□□ 0.48
TSPAN3-204ENST00000558394 WRAP53Q9BUR4 548 aaKnown RBP18.03■□□□□ 0.48
TSPAN3-204ENST00000558394 ANAPC2Q9UJX6 822 aa18.03■□□□□ 0.48
TSPAN3-204ENST00000558394 APPL1Q9UKG1 709 aa18.03■□□□□ 0.48
TSPAN3-204ENST00000558394 PCDHGC3Q9UN70 934 aa18.03■□□□□ 0.48
TSPAN3-204ENST00000558394 ATP6V1DQ9Y5K8 247 aa18.03■□□□□ 0.48
TSPAN3-204ENST00000558394 ACTL7AQ9Y615 435 aa18.03■□□□□ 0.48
TSPAN3-204ENST00000558394 FLNCQ14315 2725 aa18.03■□□□□ 0.48
TSPAN3-204ENST00000558394 CXorf51AA0A1B0GTR3 108 aa18.02■□□□□ 0.48
TSPAN3-204ENST00000558394 C9orf172C9J069 976 aa18.02■□□□□ 0.48
TSPAN3-204ENST00000558394 GNA14O95837 355 aa18.02■□□□□ 0.48
TSPAN3-204ENST00000558394 TFE3P19532 575 aaPredicted RBP18.02■□□□□ 0.48
TSPAN3-204ENST00000558394 CCR10P46092 362 aa18.02■□□□□ 0.48
TSPAN3-204ENST00000558394 POLE2P56282 527 aa18.02■□□□□ 0.48
TSPAN3-204ENST00000558394 PTK2Q05397 1052 aa18.02■□□□□ 0.48
TSPAN3-204ENST00000558394 NFATC4Q14934 902 aa18.02■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms