RNA–Protein interactions for RNA: ENST00000558347.5

TPM1-212, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 1,525 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-212ENST00000558347 RIBC1Q8N443 379 aaPredicted RBP10.48□□□□□ -0.73
TPM1-212ENST00000558347 RBM41Q96IZ5 413 aaKnown RBP10.48□□□□□ -0.73
TPM1-212ENST00000558347 NUSAP1Q9BXS6 441 aaKnown RBP10.48□□□□□ -0.73
TPM1-212ENST00000558347 CDC42EP4Q9H3Q1 356 aaKnown RBP10.48□□□□□ -0.73
TPM1-212ENST00000558347 CAPN10Q9HC96 672 aa10.48□□□□□ -0.73
TPM1-212ENST00000558347 TMEM9BQ9NQ34 198 aa10.48□□□□□ -0.73
TPM1-212ENST00000558347 ANLNQ9NQW6 1124 aa10.48□□□□□ -0.73
TPM1-212ENST00000558347 PIGVQ9NUD9 493 aa10.48□□□□□ -0.73
TPM1-212ENST00000558347 KIAA1522Q9P206 1035 aaPredicted RBP10.48□□□□□ -0.73
TPM1-212ENST00000558347 ASIC3Q9UHC3 531 aa10.48□□□□□ -0.73
TPM1-212ENST00000558347 LGALS13Q9UHV8 139 aa10.48□□□□□ -0.73
TPM1-212ENST00000558347 ERVW-1Q9UQF0 538 aa10.48□□□□□ -0.73
TPM1-212ENST00000558347 TLDC2A0PJX2 215 aa10.48□□□□□ -0.73
TPM1-212ENST00000558347 PRPSAP2O60256 369 aa10.48□□□□□ -0.73
TPM1-212ENST00000558347 TTC4O95801 387 aa10.48□□□□□ -0.73
TPM1-212ENST00000558347 ASLP04424 464 aa10.48□□□□□ -0.73
TPM1-212ENST00000558347 ADRB1P08588 477 aa10.48□□□□□ -0.73
TPM1-212ENST00000558347 SERPINF2P08697 491 aa10.48□□□□□ -0.73
TPM1-212ENST00000558347 ABHD2P08910 425 aa10.48□□□□□ -0.73
TPM1-212ENST00000558347 IVDP26440 423 aa10.48□□□□□ -0.73
TPM1-212ENST00000558347 IL1R2P27930 398 aa10.48□□□□□ -0.73
TPM1-212ENST00000558347 MZF1P28698 734 aaPredicted RBP10.48□□□□□ -0.73
TPM1-212ENST00000558347 ACSL1P33121 698 aa10.48□□□□□ -0.73
TPM1-212ENST00000558347 PTPN7P35236 360 aa10.48□□□□□ -0.73
TPM1-212ENST00000558347 RDXP35241 583 aaKnown RBP10.48□□□□□ -0.73
TPM1-212ENST00000558347 MAPK8P45983 427 aa10.48□□□□□ -0.73
TPM1-212ENST00000558347 KCNJ1P48048 391 aa10.48□□□□□ -0.73
TPM1-212ENST00000558347 SULT1E1P49888 294 aa10.48□□□□□ -0.73
TPM1-212ENST00000558347 AIF1P55008 147 aa10.48□□□□□ -0.73
TPM1-212ENST00000558347 RPS14P62263 151 aaKnown RBP10.48□□□□□ -0.73
TPM1-212ENST00000558347 CDO1Q16878 200 aa10.48□□□□□ -0.73
TPM1-212ENST00000558347 TXNRD3NBQ6F5E7 133 aa10.48□□□□□ -0.73
TPM1-212ENST00000558347 VSIG1Q86XK7 387 aa10.48□□□□□ -0.73
TPM1-212ENST00000558347 PSTKQ8IV42 348 aaKnown RBP10.48□□□□□ -0.73
TPM1-212ENST00000558347 CCDC89Q8N998 374 aa10.48□□□□□ -0.73
TPM1-212ENST00000558347 OR52K2Q8NGK3 314 aa10.48□□□□□ -0.73
TPM1-212ENST00000558347 CEP76Q8TAP6 659 aa10.48□□□□□ -0.73
TPM1-212ENST00000558347 CCT6BQ92526 530 aa10.48□□□□□ -0.73
TPM1-212ENST00000558347 FOXJ1Q92949 421 aa10.48□□□□□ -0.73
TPM1-212ENST00000558347 RPL10LQ96L21 214 aaKnown RBP10.48□□□□□ -0.73
TPM1-212ENST00000558347 RPRD1AQ96P16 312 aaPredicted RBP10.48□□□□□ -0.73
TPM1-212ENST00000558347 PEBP4Q96S96 227 aa10.48□□□□□ -0.73
TPM1-212ENST00000558347 PLCD4Q9BRC7 762 aa10.48□□□□□ -0.73
TPM1-212ENST00000558347 LRRC4CQ9HCJ2 640 aa10.48□□□□□ -0.73
TPM1-212ENST00000558347 TMPRSS4Q9NRS4 437 aa10.48□□□□□ -0.73
TPM1-212ENST00000558347 ARHGEF38Q9NXL2 777 aa10.48□□□□□ -0.73
TPM1-212ENST00000558347 SUN2Q9UH99 717 aa10.48□□□□□ -0.73
TPM1-212ENST00000558347 SLCO3A1Q9UIG8 710 aa10.48□□□□□ -0.73
TPM1-212ENST00000558347 VANGL2Q9ULK5 521 aa10.48□□□□□ -0.73
TPM1-212ENST00000558347 SLC6A14Q9UN76 642 aa10.48□□□□□ -0.73
TPM1-212ENST00000558347 NEU2Q9Y3R4 380 aa10.48□□□□□ -0.73
TPM1-212ENST00000558347 SNX10Q9Y5X0 201 aa10.48□□□□□ -0.73
TPM1-212ENST00000558347 ACTL7BQ9Y614 415 aa10.48□□□□□ -0.73
TPM1-212ENST00000558347 NUMA1Q14980 2115 aa10.47□□□□□ -0.73
TPM1-212ENST00000558347 A0A1B0GVM2 712 aa10.47□□□□□ -0.73
TPM1-212ENST00000558347 TCAF2A6NFQ2 919 aa10.47□□□□□ -0.73
TPM1-212ENST00000558347 CCT8L1PA6NM43 557 aa10.47□□□□□ -0.73
TPM1-212ENST00000558347 METTL12A8MUP2 240 aa10.47□□□□□ -0.73
TPM1-212ENST00000558347 TTC34A8MYJ7 566 aa10.47□□□□□ -0.73
TPM1-212ENST00000558347 TP73O15350 636 aa10.47□□□□□ -0.73
TPM1-212ENST00000558347 SIN3BO75182 1162 aa10.47□□□□□ -0.73
TPM1-212ENST00000558347 PAGE1O75459 146 aa10.47□□□□□ -0.73
TPM1-212ENST00000558347 RASSF9O75901 435 aa10.47□□□□□ -0.73
TPM1-212ENST00000558347 KCNK5O95279 499 aa10.47□□□□□ -0.73
TPM1-212ENST00000558347 KRT1P04264 644 aa10.47□□□□□ -0.73
TPM1-212ENST00000558347 OXTRP30559 389 aa10.47□□□□□ -0.73
TPM1-212ENST00000558347 CXCR3P49682 368 aa10.47□□□□□ -0.73
TPM1-212ENST00000558347 STK19P49842 368 aaPredicted RBP10.47□□□□□ -0.73
TPM1-212ENST00000558347 ARSEP51690 589 aa10.47□□□□□ -0.73
TPM1-212ENST00000558347 ST8SIA6P61647 398 aa10.47□□□□□ -0.73
TPM1-212ENST00000558347 IFI35P80217 286 aaPredicted RBP10.47□□□□□ -0.73
TPM1-212ENST00000558347 ECT2LQ008S8 904 aa10.47□□□□□ -0.73
TPM1-212ENST00000558347 TAZQ16635 292 aa10.47□□□□□ -0.73
TPM1-212ENST00000558347 HNRNPA1L2Q32P51 320 aaKnown RBP10.47□□□□□ -0.73
TPM1-212ENST00000558347 UAP1L1Q3KQV9 507 aa10.47□□□□□ -0.73
TPM1-212ENST00000558347 ATP13A4Q4VNC1 1196 aa10.47□□□□□ -0.73
TPM1-212ENST00000558347 RAB6CQ53S08 254 aa10.47□□□□□ -0.73
TPM1-212ENST00000558347 RABGAP1LQ5R372 815 aa10.47□□□□□ -0.73
TPM1-212ENST00000558347 SYCP2LQ5T4T6 812 aa10.47□□□□□ -0.73
TPM1-212ENST00000558347 N4BP2L1Q5TBK1 243 aaPredicted RBP10.47□□□□□ -0.73
TPM1-212ENST00000558347 TTC39BQ5VTQ0 682 aaPredicted RBP10.47□□□□□ -0.73
TPM1-212ENST00000558347 FBXW10Q5XX13 1052 aa10.47□□□□□ -0.73
TPM1-212ENST00000558347 CXorf57Q6NSI4 855 aaKnown RBP10.47□□□□□ -0.73
TPM1-212ENST00000558347 DRICH1Q6PGQ1 229 aaPredicted RBP10.47□□□□□ -0.73
TPM1-212ENST00000558347 KDM1BQ8NB78 822 aa10.47□□□□□ -0.73
TPM1-212ENST00000558347 CADM4Q8NFZ8 388 aa10.47□□□□□ -0.73
TPM1-212ENST00000558347 MDM1Q8TC05 714 aa10.47□□□□□ -0.73
TPM1-212ENST00000558347 EPS8L3Q8TE67 593 aaKnown RBP10.47□□□□□ -0.73
TPM1-212ENST00000558347 C1orf54Q8WWF1 131 aa10.47□□□□□ -0.73
TPM1-212ENST00000558347 DNASE2BQ8WZ79 361 aa10.47□□□□□ -0.73
TPM1-212ENST00000558347 NTAN1Q96AB6 310 aa10.47□□□□□ -0.73
TPM1-212ENST00000558347 CCDC114Q96M63 670 aa10.47□□□□□ -0.73
TPM1-212ENST00000558347 CCDC77Q9BR77 488 aa10.47□□□□□ -0.73
TPM1-212ENST00000558347 TKTL2Q9H0I9 626 aa10.47□□□□□ -0.73
TPM1-212ENST00000558347 SIK2Q9H0K1 926 aa10.47□□□□□ -0.73
TPM1-212ENST00000558347 RAB6CQ9H0N0 254 aa10.47□□□□□ -0.73
TPM1-212ENST00000558347 RSPH9Q9H1X1 276 aaPredicted RBP10.47□□□□□ -0.73
TPM1-212ENST00000558347 C6orf106Q9H6K1 298 aaPredicted RBP10.47□□□□□ -0.73
TPM1-212ENST00000558347 WDCPQ9H6R7 721 aa10.47□□□□□ -0.73
TPM1-212ENST00000558347 ZWILCHQ9H900 591 aa10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms