RNA–Protein interactions for RNA: ENST00000557262.5

TUBB3-213, Transcript of tubulin beta 3 class III, humanhuman

TSL 1 (best)

Gene TUBB3, Length 888 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-213ENST00000557262 YPEL5P62699 121 aa16.09■□□□□ 0.17
TUBB3-213ENST00000557262 EIF2B5Q13144 721 aaKnown RBP16.09■□□□□ 0.17
TUBB3-213ENST00000557262 SERINC3Q13530 473 aa16.09■□□□□ 0.17
TUBB3-213ENST00000557262 STX1AQ16623 288 aa16.09■□□□□ 0.17
TUBB3-213ENST00000557262 PARP15Q460N3 678 aa16.09■□□□□ 0.17
TUBB3-213ENST00000557262 PPP1R15BQ5SWA1 713 aa16.09■□□□□ 0.17
TUBB3-213ENST00000557262 TPRG1LQ5T0D9 272 aa16.09■□□□□ 0.17
TUBB3-213ENST00000557262 DCUN1D2Q6PH85 259 aa16.09■□□□□ 0.17
TUBB3-213ENST00000557262 MCOLN2Q8IZK6 566 aa16.09■□□□□ 0.17
TUBB3-213ENST00000557262 UMODL1-AS1Q8N2C9 162 aa16.09■□□□□ 0.17
TUBB3-213ENST00000557262 HCAR2Q8TDS4 363 aa16.09■□□□□ 0.17
TUBB3-213ENST00000557262 LMX1AQ8TE12 382 aa16.09■□□□□ 0.17
TUBB3-213ENST00000557262 HMCESQ96FZ2 354 aa16.09■□□□□ 0.17
TUBB3-213ENST00000557262 MCEEQ96PE7 176 aa16.09■□□□□ 0.17
TUBB3-213ENST00000557262 GBP4Q96PP9 640 aa16.09■□□□□ 0.17
TUBB3-213ENST00000557262 DEPDC7Q96QD5 511 aa16.09■□□□□ 0.17
TUBB3-213ENST00000557262 IL12RB2Q99665 862 aa16.09■□□□□ 0.17
TUBB3-213ENST00000557262 NCKIPSDQ9NZQ3 722 aa16.09■□□□□ 0.17
TUBB3-213ENST00000557262 SPASTQ9UBP0 616 aa16.09■□□□□ 0.17
TUBB3-213ENST00000557262 SMG1Q96Q15 3661 aaKnown RBP16.08■□□□□ 0.16
TUBB3-213ENST00000557262 TOR1BO14657 336 aa16.08■□□□□ 0.16
TUBB3-213ENST00000557262 DESP17661 470 aa16.08■□□□□ 0.16
TUBB3-213ENST00000557262 ANP32AP39687 249 aaKnown RBP16.08■□□□□ 0.16
TUBB3-213ENST00000557262 SUOXP51687 545 aa16.08■□□□□ 0.16
TUBB3-213ENST00000557262 NCAPHQ15003 741 aa16.08■□□□□ 0.16
TUBB3-213ENST00000557262 CYTH1Q15438 398 aa16.08■□□□□ 0.16
TUBB3-213ENST00000557262 TBC1D25Q3MII6 688 aa16.08■□□□□ 0.16
TUBB3-213ENST00000557262 APTXQ7Z2E3 356 aaKnown RBP16.08■□□□□ 0.16
TUBB3-213ENST00000557262 VPS36Q86VN1 386 aa16.08■□□□□ 0.16
TUBB3-213ENST00000557262 LSMEM2Q8N112 164 aa16.08■□□□□ 0.16
TUBB3-213ENST00000557262 NETO2Q8NC67 525 aa16.08■□□□□ 0.16
TUBB3-213ENST00000557262 IFI44Q8TCB0 444 aa16.08■□□□□ 0.16
TUBB3-213ENST00000557262 CXorf40AQ8TE69 158 aa16.08■□□□□ 0.16
TUBB3-213ENST00000557262 VCPIP1Q96JH7 1222 aa16.08■□□□□ 0.16
TUBB3-213ENST00000557262 BBC3Q96PG8 261 aaPredicted RBP16.08■□□□□ 0.16
TUBB3-213ENST00000557262 C1QTNF7Q9BXJ2 289 aa16.08■□□□□ 0.16
TUBB3-213ENST00000557262 DONSONQ9NYP3 566 aa16.08■□□□□ 0.16
TUBB3-213ENST00000557262 PCDHB1Q9Y5F3 818 aa16.08■□□□□ 0.16
TUBB3-213ENST00000557262 BPTFQ12830 3046 aa16.08■□□□□ 0.16
TUBB3-213ENST00000557262 CPED1A4D0V7 1026 aa16.07■□□□□ 0.16
TUBB3-213ENST00000557262 EIF4E1BA6NMX2 242 aaKnown RBP16.07■□□□□ 0.16
TUBB3-213ENST00000557262 FGF10O15520 208 aaPredicted RBP16.07■□□□□ 0.16
TUBB3-213ENST00000557262 ITIH2P19823 946 aa16.07■□□□□ 0.16
TUBB3-213ENST00000557262 TNFAIP3P21580 790 aa16.07■□□□□ 0.16
TUBB3-213ENST00000557262 XPAP23025 273 aaPredicted RBP16.07■□□□□ 0.16
TUBB3-213ENST00000557262 HTR7P34969 479 aa16.07■□□□□ 0.16
TUBB3-213ENST00000557262 IGFALSP35858 605 aa16.07■□□□□ 0.16
TUBB3-213ENST00000557262 GRM3Q14832 879 aa16.07■□□□□ 0.16
TUBB3-213ENST00000557262 CDKN3Q16667 212 aa16.07■□□□□ 0.16
TUBB3-213ENST00000557262 DEFB133Q30KQ1 61 aa16.07■□□□□ 0.16
TUBB3-213ENST00000557262 TMEM52BQ4KMG9 183 aa16.07■□□□□ 0.16
TUBB3-213ENST00000557262 LRRC73Q5JTD7 316 aa16.07■□□□□ 0.16
TUBB3-213ENST00000557262 IRF2BP2Q7Z5L9 587 aa16.07■□□□□ 0.16
TUBB3-213ENST00000557262 TPCN2Q8NHX9 752 aa16.07■□□□□ 0.16
TUBB3-213ENST00000557262 MAPK15Q8TD08 544 aa16.07■□□□□ 0.16
TUBB3-213ENST00000557262 HSD3B7Q9H2F3 369 aa16.07■□□□□ 0.16
TUBB3-213ENST00000557262 PRORYQ9H606 182 aa16.07■□□□□ 0.16
TUBB3-213ENST00000557262 MBNL1Q9NR56 388 aaKnown RBP16.07■□□□□ 0.16
TUBB3-213ENST00000557262 LHX3Q9UBR4 397 aa16.07■□□□□ 0.16
TUBB3-213ENST00000557262 UBA2Q9UBT2 640 aaPredicted RBP16.07■□□□□ 0.16
TUBB3-213ENST00000557262 RAI2Q9Y5P3 530 aa16.07■□□□□ 0.16
TUBB3-213ENST00000557262 EME2A4GXA9 379 aaPredicted RBP16.06■□□□□ 0.16
TUBB3-213ENST00000557262 INSIG1O15503 277 aa16.06■□□□□ 0.16
TUBB3-213ENST00000557262 USP12O75317 370 aa16.06■□□□□ 0.16
TUBB3-213ENST00000557262 CSO75390 466 aaKnown RBP16.06■□□□□ 0.16
TUBB3-213ENST00000557262 GCATO75600 419 aa16.06■□□□□ 0.16
TUBB3-213ENST00000557262 EIF4A3P38919 411 aaKnown RBP16.06■□□□□ 0.16
TUBB3-213ENST00000557262 LSSP48449 732 aa16.06■□□□□ 0.16
TUBB3-213ENST00000557262 NDST2P52849 883 aa16.06■□□□□ 0.16
TUBB3-213ENST00000557262 ADKP55263 362 aaKnown RBP16.06■□□□□ 0.16
TUBB3-213ENST00000557262 OGDHQ02218 1023 aa16.06■□□□□ 0.16
TUBB3-213ENST00000557262 ELP6Q0PNE2 266 aa16.06■□□□□ 0.16
TUBB3-213ENST00000557262 KLHL40Q2TBA0 621 aa16.06■□□□□ 0.16
TUBB3-213ENST00000557262 PRRT3Q5FWE3 981 aa16.06■□□□□ 0.16
TUBB3-213ENST00000557262 FAXCQ5TGI0 409 aa16.06■□□□□ 0.16
TUBB3-213ENST00000557262 PPP1R2P3Q6NXS1 205 aa16.06■□□□□ 0.16
TUBB3-213ENST00000557262 DNAAF5Q86Y56 855 aa16.06■□□□□ 0.16
TUBB3-213ENST00000557262 PHACTR4Q8IZ21 702 aa16.06■□□□□ 0.16
TUBB3-213ENST00000557262 RBFAQ8N0V3 343 aa16.06■□□□□ 0.16
TUBB3-213ENST00000557262 TP53I13Q8NBR0 393 aaPredicted RBP16.06■□□□□ 0.16
TUBB3-213ENST00000557262 GLMNQ92990 594 aa16.06■□□□□ 0.16
TUBB3-213ENST00000557262 TBATAQ96M53 351 aa16.06■□□□□ 0.16
TUBB3-213ENST00000557262 ZNF578Q96N58 590 aaPredicted RBP16.06■□□□□ 0.16
TUBB3-213ENST00000557262 UBL7Q96S82 380 aaPredicted RBP16.06■□□□□ 0.16
TUBB3-213ENST00000557262 NCAPGQ9BPX3 1015 aa16.06■□□□□ 0.16
TUBB3-213ENST00000557262 WRAP53Q9BUR4 548 aaKnown RBP16.06■□□□□ 0.16
TUBB3-213ENST00000557262 SLC13A1Q9BZW2 595 aa16.06■□□□□ 0.16
TUBB3-213ENST00000557262 TCEAL2Q9H3H9 227 aaPredicted RBP16.06■□□□□ 0.16
TUBB3-213ENST00000557262 SUV39H2Q9H5I1 410 aa16.06■□□□□ 0.16
TUBB3-213ENST00000557262 APOBEC3BQ9UH17 382 aaKnown RBP16.06■□□□□ 0.16
TUBB3-213ENST00000557262 MYO6Q9UM54 1294 aa16.06■□□□□ 0.16
TUBB3-213ENST00000557262 TMEM110-MUSTN1A8MSY1 372 aa16.05■□□□□ 0.16
TUBB3-213ENST00000557262 EIF3CLB5ME19 914 aaKnown RBP16.05■□□□□ 0.16
TUBB3-213ENST00000557262 GOLGA6L22H0YM25 854 aa16.05■□□□□ 0.16
TUBB3-213ENST00000557262 MPOP05164 745 aa16.05■□□□□ 0.16
TUBB3-213ENST00000557262 ANXA6P08133 673 aa16.05■□□□□ 0.16
TUBB3-213ENST00000557262 TGM2P21980 687 aa16.05■□□□□ 0.16
TUBB3-213ENST00000557262 RPIAP49247 311 aa16.05■□□□□ 0.16
TUBB3-213ENST00000557262 PEX5P50542 639 aa16.05■□□□□ 0.16
TUBB3-213ENST00000557262 TPI1P60174 286 aa16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms