RNA–Protein interactions for RNA: ENST00000556853.5

CNOT10-219, Transcript of CCR4-NOT transcription complex subunit 10, humanhuman

TSL 4

Gene CNOT10, Length 551 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT10-219ENST00000556853 MAN1A1P33908 653 aa12.34□□□□□ -0.43
CNOT10-219ENST00000556853 CLCN1P35523 988 aa12.34□□□□□ -0.43
CNOT10-219ENST00000556853 ITGA1P56199 1179 aa12.34□□□□□ -0.43
CNOT10-219ENST00000556853 SLC8A3P57103 927 aa12.34□□□□□ -0.43
CNOT10-219ENST00000556853 SRP54P61011 504 aaKnown RBP12.34□□□□□ -0.43
CNOT10-219ENST00000556853 HMGN5P82970 282 aaKnown RBP12.34□□□□□ -0.43
CNOT10-219ENST00000556853 DPYDQ12882 1025 aa12.34□□□□□ -0.43
CNOT10-219ENST00000556853 ENPP7Q6UWV6 458 aa12.34□□□□□ -0.43
CNOT10-219ENST00000556853 CHSY1Q86X52 802 aa12.34□□□□□ -0.43
CNOT10-219ENST00000556853 FAM184AQ8NB25 1140 aa12.34□□□□□ -0.43
CNOT10-219ENST00000556853 ZNF507Q8TCN5 953 aa12.34□□□□□ -0.43
CNOT10-219ENST00000556853 TMUB1Q9BVT8 246 aa12.34□□□□□ -0.43
CNOT10-219ENST00000556853 TRIM8Q9BZR9 551 aa12.34□□□□□ -0.43
CNOT10-219ENST00000556853 DNAI2Q9GZS0 605 aa12.34□□□□□ -0.43
CNOT10-219ENST00000556853 CNGB3Q9NQW8 809 aa12.34□□□□□ -0.43
CNOT10-219ENST00000556853 TLR6Q9Y2C9 796 aa12.34□□□□□ -0.43
CNOT10-219ENST00000556853 ZNF451Q9Y4E5 1061 aa12.34□□□□□ -0.43
CNOT10-219ENST00000556853 PCDHGB7Q9Y5F8 929 aa12.34□□□□□ -0.43
CNOT10-219ENST00000556853 ARHGEF17Q96PE2 2063 aaPredicted RBP12.33□□□□□ -0.44
CNOT10-219ENST00000556853 TCAF2A6NFQ2 919 aa12.33□□□□□ -0.44
CNOT10-219ENST00000556853 TMEM110-MUSTN1A8MSY1 372 aa12.33□□□□□ -0.44
CNOT10-219ENST00000556853 PRICKLE3O43900 615 aaPredicted RBP12.33□□□□□ -0.44
CNOT10-219ENST00000556853 ABL2P42684 1182 aa12.33□□□□□ -0.44
CNOT10-219ENST00000556853 SNRPFP62306 86 aaKnown RBP12.33□□□□□ -0.44
CNOT10-219ENST00000556853 NUCB2P80303 420 aa12.33□□□□□ -0.44
CNOT10-219ENST00000556853 NNTQ13423 1086 aa12.33□□□□□ -0.44
CNOT10-219ENST00000556853 SQSTM1Q13501 440 aa12.33□□□□□ -0.44
CNOT10-219ENST00000556853 KCTD16Q68DU8 428 aa12.33□□□□□ -0.44
CNOT10-219ENST00000556853 SPECC1LQ69YQ0 1117 aa12.33□□□□□ -0.44
CNOT10-219ENST00000556853 DPY19L3Q6ZPD9 716 aa12.33□□□□□ -0.44
CNOT10-219ENST00000556853 PARS2Q7L3T8 475 aaKnown RBP12.33□□□□□ -0.44
CNOT10-219ENST00000556853 EPM2AIP1Q7L775 607 aaPredicted RBP12.33□□□□□ -0.44
CNOT10-219ENST00000556853 TAF8Q7Z7C8 310 aa12.33□□□□□ -0.44
CNOT10-219ENST00000556853 CDH24Q86UP0 819 aa12.33□□□□□ -0.44
CNOT10-219ENST00000556853 C17orf82Q86X59 251 aaPredicted RBP12.33□□□□□ -0.44
CNOT10-219ENST00000556853 RBMXL3Q8N7X1 1067 aaKnown RBP12.33□□□□□ -0.44
CNOT10-219ENST00000556853 ATP11CQ8NB49 1132 aa12.33□□□□□ -0.44
CNOT10-219ENST00000556853 TP53I13Q8NBR0 393 aaPredicted RBP12.33□□□□□ -0.44
CNOT10-219ENST00000556853 EPSTI1Q96J88 318 aa12.33□□□□□ -0.44
CNOT10-219ENST00000556853 TWSG1Q9GZX9 223 aa12.33□□□□□ -0.44
CNOT10-219ENST00000556853 DPEP2Q9H4A9 486 aa12.33□□□□□ -0.44
CNOT10-219ENST00000556853 APOBEC3GQ9HC16 384 aaKnown RBP12.33□□□□□ -0.44
CNOT10-219ENST00000556853 APMAPQ9HDC9 416 aa12.33□□□□□ -0.44
CNOT10-219ENST00000556853 FBXO8Q9NRD0 319 aa12.33□□□□□ -0.44
CNOT10-219ENST00000556853 TMEM9Q9P0T7 183 aa12.33□□□□□ -0.44
CNOT10-219ENST00000556853 ITM2BQ9Y287 266 aa12.33□□□□□ -0.44
CNOT10-219ENST00000556853 ZSCAN5CA6NGD5 496 aaPredicted RBP12.32□□□□□ -0.44
CNOT10-219ENST00000556853 RHPN2P1A8MT19 583 aa12.32□□□□□ -0.44
CNOT10-219ENST00000556853 F5H5T6 163 aa12.32□□□□□ -0.44
CNOT10-219ENST00000556853 ZW10O43264 779 aa12.32□□□□□ -0.44
CNOT10-219ENST00000556853 SMAD6O43541 496 aaKnown RBP12.32□□□□□ -0.44
CNOT10-219ENST00000556853 CREG1O75629 220 aa12.32□□□□□ -0.44
CNOT10-219ENST00000556853 TNFP01375 233 aa12.32□□□□□ -0.44
CNOT10-219ENST00000556853 HLA-DRAP01903 254 aa12.32□□□□□ -0.44
CNOT10-219ENST00000556853 CD99P14209 185 aa12.32□□□□□ -0.44
CNOT10-219ENST00000556853 BPIP17213 487 aa12.32□□□□□ -0.44
CNOT10-219ENST00000556853 CAPN3P20807 821 aa12.32□□□□□ -0.44
CNOT10-219ENST00000556853 RRM1P23921 792 aa12.32□□□□□ -0.44
CNOT10-219ENST00000556853 CSF2RBP32927 897 aa12.32□□□□□ -0.44
CNOT10-219ENST00000556853 MAZP56270 477 aaKnown RBP12.32□□□□□ -0.44
CNOT10-219ENST00000556853 KRTAP10-9P60411 292 aa12.32□□□□□ -0.44
CNOT10-219ENST00000556853 DLG4P78352 724 aa12.32□□□□□ -0.44
CNOT10-219ENST00000556853 C12orf56Q8IXR9 622 aa12.32□□□□□ -0.44
CNOT10-219ENST00000556853 CCDC65Q8IXS2 484 aa12.32□□□□□ -0.44
CNOT10-219ENST00000556853 ZNF295-AS1Q8N0V1 137 aa12.32□□□□□ -0.44
CNOT10-219ENST00000556853 SIX6OS1Q8N1H7 587 aa12.32□□□□□ -0.44
CNOT10-219ENST00000556853 SLC4A11Q8NBS3 891 aa12.32□□□□□ -0.44
CNOT10-219ENST00000556853 RAB7BQ96AH8 199 aa12.32□□□□□ -0.44
CNOT10-219ENST00000556853 SERPINB11Q96P15 392 aa12.32□□□□□ -0.44
CNOT10-219ENST00000556853 DPYSL5Q9BPU6 564 aa12.32□□□□□ -0.44
CNOT10-219ENST00000556853 COPG2Q9UBF2 871 aa12.32□□□□□ -0.44
CNOT10-219ENST00000556853 KLQ9UEF7 1012 aa12.32□□□□□ -0.44
CNOT10-219ENST00000556853 VPS28Q9UK41 221 aa12.32□□□□□ -0.44
CNOT10-219ENST00000556853 KLF2Q9Y5W3 355 aaPredicted RBP12.32□□□□□ -0.44
CNOT10-219ENST00000556853 DGKBQ9Y6T7 804 aa12.32□□□□□ -0.44
CNOT10-219ENST00000556853 TACC2O95359 2948 aa12.32□□□□□ -0.44
CNOT10-219ENST00000556853 CHD5Q8TDI0 1954 aa12.32□□□□□ -0.44
CNOT10-219ENST00000556853 NEMP1O14524 444 aa12.31□□□□□ -0.44
CNOT10-219ENST00000556853 EXOC3O60645 756 aa12.31□□□□□ -0.44
CNOT10-219ENST00000556853 KATNA1O75449 491 aa12.31□□□□□ -0.44
CNOT10-219ENST00000556853 LTFP02788 710 aa12.31□□□□□ -0.44
CNOT10-219ENST00000556853 SNRPB2P08579 225 aaKnown RBP12.31□□□□□ -0.44
CNOT10-219ENST00000556853 BMP6P22004 513 aa12.31□□□□□ -0.44
CNOT10-219ENST00000556853 HTR1BP28222 390 aa12.31□□□□□ -0.44
CNOT10-219ENST00000556853 PIK3CAP42336 1068 aa12.31□□□□□ -0.44
CNOT10-219ENST00000556853 CCL11P51671 97 aa12.31□□□□□ -0.44
CNOT10-219ENST00000556853 CDK18Q07002 472 aa12.31□□□□□ -0.44
CNOT10-219ENST00000556853 ART3Q13508 389 aa12.31□□□□□ -0.44
CNOT10-219ENST00000556853 NFATC4Q14934 902 aa12.31□□□□□ -0.44
CNOT10-219ENST00000556853 CHRNA6Q15825 494 aa12.31□□□□□ -0.44
CNOT10-219ENST00000556853 TTC39BQ5VTQ0 682 aaPredicted RBP12.31□□□□□ -0.44
CNOT10-219ENST00000556853 NKAIN2Q5VXU1 208 aa12.31□□□□□ -0.44
CNOT10-219ENST00000556853 CPZQ66K79 652 aa12.31□□□□□ -0.44
CNOT10-219ENST00000556853 C22orf39Q6P5X5 142 aa12.31□□□□□ -0.44
CNOT10-219ENST00000556853 HPS6Q86YV9 775 aa12.31□□□□□ -0.44
CNOT10-219ENST00000556853 IQCKQ8N0W5 287 aa12.31□□□□□ -0.44
CNOT10-219ENST00000556853 CISD2Q8N5K1 135 aaKnown RBP12.31□□□□□ -0.44
CNOT10-219ENST00000556853 DQX1Q8TE96 717 aaKnown RBP12.31□□□□□ -0.44
CNOT10-219ENST00000556853 IRGQQ8WZA9 623 aa12.31□□□□□ -0.44
CNOT10-219ENST00000556853 HDAC11Q96DB2 347 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms