RNA–Protein interactions for RNA: ENST00000556737.1

SHMT2-224, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 572 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-224ENST00000556737 RAB7BQ96AH8 199 aa10.46□□□□□ -0.73
SHMT2-224ENST00000556737 CSPG4P5Q96PW8 444 aa10.46□□□□□ -0.73
SHMT2-224ENST00000556737 KLF6Q99612 283 aaPredicted RBP10.46□□□□□ -0.73
SHMT2-224ENST00000556737 NCAPGQ9BPX3 1015 aa10.46□□□□□ -0.73
SHMT2-224ENST00000556737 C1QTNF2Q9BXJ5 285 aa10.46□□□□□ -0.73
SHMT2-224ENST00000556737 ZWILCHQ9H900 591 aa10.46□□□□□ -0.73
SHMT2-224ENST00000556737 PCDH18Q9HCL0 1135 aa10.46□□□□□ -0.73
SHMT2-224ENST00000556737 NEUROG3Q9Y4Z2 214 aa10.46□□□□□ -0.73
SHMT2-224ENST00000556737 PCDHB9Q9Y5E1 797 aa10.46□□□□□ -0.73
SHMT2-224ENST00000556737 PLXNB3Q9ULL4 1909 aa10.46□□□□□ -0.74
SHMT2-224ENST00000556737 TRPM6Q9BX84 2022 aa10.46□□□□□ -0.74
SHMT2-224ENST00000556737 CABIN1Q9Y6J0 2220 aa10.46□□□□□ -0.74
SHMT2-224ENST00000556737 FREM2Q5SZK8 3169 aa10.46□□□□□ -0.74
SHMT2-224ENST00000556737 LRP4O75096 1905 aa10.45□□□□□ -0.74
SHMT2-224ENST00000556737 SSU72P8A0A1W2PR75 194 aa10.45□□□□□ -0.74
SHMT2-224ENST00000556737 ARHGAP42A6NI28 874 aa10.45□□□□□ -0.74
SHMT2-224ENST00000556737 A6NNZ2 444 aa10.45□□□□□ -0.74
SHMT2-224ENST00000556737 C1QTNF9BB2RNN3 333 aa10.45□□□□□ -0.74
SHMT2-224ENST00000556737 H3BRJ5 948 aa10.45□□□□□ -0.74
SHMT2-224ENST00000556737 MUSKO15146 869 aa10.45□□□□□ -0.74
SHMT2-224ENST00000556737 TSPAN6O43657 245 aa10.45□□□□□ -0.74
SHMT2-224ENST00000556737 PEX11BO96011 259 aa10.45□□□□□ -0.74
SHMT2-224ENST00000556737 ATXN1LP0C7T5 689 aaKnown RBP10.45□□□□□ -0.74
SHMT2-224ENST00000556737 C1QTNF9P0C862 333 aa10.45□□□□□ -0.74
SHMT2-224ENST00000556737 THEGLP0DJG4 465 aa10.45□□□□□ -0.74
SHMT2-224ENST00000556737 AKT2P31751 481 aa10.45□□□□□ -0.74
SHMT2-224ENST00000556737 ARSEP51690 589 aa10.45□□□□□ -0.74
SHMT2-224ENST00000556737 BNIP3Q12983 259 aa10.45□□□□□ -0.74
SHMT2-224ENST00000556737 MAPK8IP2Q13387 824 aaPredicted RBP10.45□□□□□ -0.74
SHMT2-224ENST00000556737 STAT4Q14765 748 aa10.45□□□□□ -0.74
SHMT2-224ENST00000556737 SUZ12Q15022 739 aaKnown RBP10.45□□□□□ -0.74
SHMT2-224ENST00000556737 SLC18A3Q16572 532 aa10.45□□□□□ -0.74
SHMT2-224ENST00000556737 INAVAQ3KP66 663 aa10.45□□□□□ -0.74
SHMT2-224ENST00000556737 TPRG1LQ5T0D9 272 aa10.45□□□□□ -0.74
SHMT2-224ENST00000556737 UNQ6494/PRO21346Q6UXR6 183 aa10.45□□□□□ -0.74
SHMT2-224ENST00000556737 ZSCAN30Q86W11 494 aa10.45□□□□□ -0.74
SHMT2-224ENST00000556737 ZSWIM9Q86XI8 627 aa10.45□□□□□ -0.74
SHMT2-224ENST00000556737 LRRC8AQ8IWT6 810 aa10.45□□□□□ -0.74
SHMT2-224ENST00000556737 TSEN2Q8NCE0 465 aaKnown RBP10.45□□□□□ -0.74
SHMT2-224ENST00000556737 CCDC112Q8NEF3 446 aa10.45□□□□□ -0.74
SHMT2-224ENST00000556737 ZNF564Q8TBZ8 553 aaPredicted RBP10.45□□□□□ -0.74
SHMT2-224ENST00000556737 RHBDD1Q8TEB9 315 aa10.45□□□□□ -0.74
SHMT2-224ENST00000556737 BMFQ96LC9 184 aa10.45□□□□□ -0.74
SHMT2-224ENST00000556737 NSMCE3Q96MG7 304 aa10.45□□□□□ -0.74
SHMT2-224ENST00000556737 CDC6Q99741 560 aa10.45□□□□□ -0.74
SHMT2-224ENST00000556737 CPEB1Q9BZB8 566 aaKnown RBP10.45□□□□□ -0.74
SHMT2-224ENST00000556737 ABHD10Q9NUJ1 306 aa10.45□□□□□ -0.74
SHMT2-224ENST00000556737 DONSONQ9NYP3 566 aa10.45□□□□□ -0.74
SHMT2-224ENST00000556737 DKK3Q9UBP4 350 aa10.45□□□□□ -0.74
SHMT2-224ENST00000556737 IP6K2Q9UHH9 426 aa10.45□□□□□ -0.74
SHMT2-224ENST00000556737 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP10.45□□□□□ -0.748e-7■■□□□ 12.4
SHMT2-224ENST00000556737 POM121BA6NF01 834 aa10.44□□□□□ -0.74
SHMT2-224ENST00000556737 IGLON5A6NGN9 336 aa10.44□□□□□ -0.74
SHMT2-224ENST00000556737 DFFAO00273 331 aa10.44□□□□□ -0.74
SHMT2-224ENST00000556737 DAPK3O43293 454 aa10.44□□□□□ -0.74
SHMT2-224ENST00000556737 TNFSF14O43557 240 aa10.44□□□□□ -0.74
SHMT2-224ENST00000556737 BUB1BO60566 1050 aaPredicted RBP10.44□□□□□ -0.74
SHMT2-224ENST00000556737 MAGEC1O60732 1142 aa10.44□□□□□ -0.74
SHMT2-224ENST00000556737 SDC3O75056 442 aa10.44□□□□□ -0.74
SHMT2-224ENST00000556737 PROSCO94903 275 aa10.44□□□□□ -0.74
SHMT2-224ENST00000556737 CD48P09326 243 aa10.44□□□□□ -0.74
SHMT2-224ENST00000556737 TIMP2P16035 220 aa10.44□□□□□ -0.74
SHMT2-224ENST00000556737 ITIH2P19823 946 aa10.44□□□□□ -0.74
SHMT2-224ENST00000556737 AMPD1P23109 780 aa10.44□□□□□ -0.74
SHMT2-224ENST00000556737 IL4RP24394 825 aa10.44□□□□□ -0.74
SHMT2-224ENST00000556737 IGFALSP35858 605 aa10.44□□□□□ -0.74
SHMT2-224ENST00000556737 ARL4AP40617 200 aa10.44□□□□□ -0.74
SHMT2-224ENST00000556737 ARRB1P49407 418 aaPredicted RBP10.44□□□□□ -0.74
SHMT2-224ENST00000556737 IL10RBQ08334 325 aa10.44□□□□□ -0.74
SHMT2-224ENST00000556737 BOLA3Q53S33 107 aa10.44□□□□□ -0.74
SHMT2-224ENST00000556737 PTAR1Q7Z6K3 402 aaPredicted RBP10.44□□□□□ -0.74
SHMT2-224ENST00000556737 TC2NQ8N9U0 490 aa10.44□□□□□ -0.74
SHMT2-224ENST00000556737 DENND6BQ8NEG7 585 aa10.44□□□□□ -0.74
SHMT2-224ENST00000556737 OR8K1Q8NGG5 319 aa10.44□□□□□ -0.74
SHMT2-224ENST00000556737 ASB12Q8WXK4 309 aa10.44□□□□□ -0.74
SHMT2-224ENST00000556737 KLHDC7BQ96G42 594 aa10.44□□□□□ -0.74
SHMT2-224ENST00000556737 LENG8Q96PV6 779 aaPredicted RBP10.44□□□□□ -0.74
SHMT2-224ENST00000556737 PANX2Q96RD6 677 aa10.44□□□□□ -0.74
SHMT2-224ENST00000556737 BAG1Q99933 345 aaPredicted RBP10.44□□□□□ -0.74
SHMT2-224ENST00000556737 CALN1Q9BXU9 219 aa10.44□□□□□ -0.74
SHMT2-224ENST00000556737 SLC17A9Q9BYT1 436 aa10.44□□□□□ -0.74
SHMT2-224ENST00000556737 SP110Q9HB58 689 aa10.44□□□□□ -0.74
SHMT2-224ENST00000556737 FTSJ1Q9UET6 329 aa10.44□□□□□ -0.74
SHMT2-224ENST00000556737 IPO11Q9UI26 975 aaKnown RBP10.44□□□□□ -0.74
SHMT2-224ENST00000556737 APOBEC2Q9Y235 224 aaKnown RBP10.44□□□□□ -0.74
SHMT2-224ENST00000556737 MSRB2Q9Y3D2 182 aa10.44□□□□□ -0.74
SHMT2-224ENST00000556737 ZZEF1O43149 2961 aa10.44□□□□□ -0.74
SHMT2-224ENST00000556737 MFSD11O43934 449 aa10.43□□□□□ -0.74
SHMT2-224ENST00000556737 MAFKO60675 156 aa10.43□□□□□ -0.74
SHMT2-224ENST00000556737 PAK4O96013 591 aaPredicted RBP10.43□□□□□ -0.74
SHMT2-224ENST00000556737 ITGAVP06756 1048 aa10.43□□□□□ -0.74
SHMT2-224ENST00000556737 PROS1P07225 676 aa10.43□□□□□ -0.74
SHMT2-224ENST00000556737 GIMD1P0DJR0 217 aa10.43□□□□□ -0.74
SHMT2-224ENST00000556737 CR2P20023 1033 aa10.43□□□□□ -0.74
SHMT2-224ENST00000556737 MSNP26038 577 aaKnown RBP10.43□□□□□ -0.74
SHMT2-224ENST00000556737 MMP12P39900 470 aa10.43□□□□□ -0.74
SHMT2-224ENST00000556737 CSNK1DP48730 415 aa10.43□□□□□ -0.74
SHMT2-224ENST00000556737 ACADVLP49748 655 aa10.43□□□□□ -0.74
SHMT2-224ENST00000556737 TAS2R40P59535 323 aa10.43□□□□□ -0.74
SHMT2-224ENST00000556737 PFN3P60673 137 aa10.43□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms