RNA–Protein interactions for RNA: ENST00000556268.1

GTF2A1-204, Transcript of general transcription factor IIA subunit 1, humanhuman

TSL 5

Gene GTF2A1, Length 864 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1-204ENST00000556268 INTS8Q75QN2 995 aaKnown RBP9.3□□□□□ -0.92
GTF2A1-204ENST00000556268 GALNT15Q8N3T1 639 aa9.3□□□□□ -0.92
GTF2A1-204ENST00000556268 TTC39CQ8N584 583 aa9.3□□□□□ -0.92
GTF2A1-204ENST00000556268 DDI1Q8WTU0 396 aa9.3□□□□□ -0.92
GTF2A1-204ENST00000556268 SEMA4DQ92854 862 aa9.3□□□□□ -0.92
GTF2A1-204ENST00000556268 IGSF8Q969P0 613 aa9.3□□□□□ -0.92
GTF2A1-204ENST00000556268 JAKMIP2Q96AA8 810 aa9.3□□□□□ -0.92
GTF2A1-204ENST00000556268 BIRC7Q96CA5 298 aa9.3□□□□□ -0.92
GTF2A1-204ENST00000556268 TMA16Q96EY4 203 aaKnown RBP9.3□□□□□ -0.92
GTF2A1-204ENST00000556268 TMEM176AQ96HP8 235 aa9.3□□□□□ -0.92
GTF2A1-204ENST00000556268 LMLNQ96KR4 655 aa9.3□□□□□ -0.92
GTF2A1-204ENST00000556268 DNAI2Q9GZS0 605 aa9.3□□□□□ -0.92
GTF2A1-204ENST00000556268 TMEM8AQ9HCN3 771 aa9.3□□□□□ -0.92
GTF2A1-204ENST00000556268 TM9SF3Q9HD45 589 aa9.3□□□□□ -0.92
GTF2A1-204ENST00000556268 PRSS16Q9NQE7 514 aa9.3□□□□□ -0.92
GTF2A1-204ENST00000556268 USP25Q9UHP3 1055 aa9.3□□□□□ -0.92
GTF2A1-204ENST00000556268 PLA2G4CQ9UP65 541 aa9.3□□□□□ -0.92
GTF2A1-204ENST00000556268 BTBD3Q9Y2F9 522 aa9.3□□□□□ -0.92
GTF2A1-204ENST00000556268 HBS1LQ9Y450 684 aaKnown RBP9.3□□□□□ -0.92
GTF2A1-204ENST00000556268 FAM237AA0A1B0GTK4 181 aa9.29□□□□□ -0.92
GTF2A1-204ENST00000556268 KCNK3O14649 394 aa9.29□□□□□ -0.92
GTF2A1-204ENST00000556268 KLF4O43474 513 aa9.29□□□□□ -0.92
GTF2A1-204ENST00000556268 DFNA5O60443 496 aa9.29□□□□□ -0.92
GTF2A1-204ENST00000556268 BUB1BO60566 1050 aaPredicted RBP9.29□□□□□ -0.92
GTF2A1-204ENST00000556268 RHOBTB3O94955 611 aa9.29□□□□□ -0.92
GTF2A1-204ENST00000556268 LATS1O95835 1130 aa9.29□□□□□ -0.92
GTF2A1-204ENST00000556268 ZBED1O96006 694 aa9.29□□□□□ -0.92
GTF2A1-204ENST00000556268 HMBSP08397 361 aa9.29□□□□□ -0.92
GTF2A1-204ENST00000556268 SNRPB2P08579 225 aaKnown RBP9.29□□□□□ -0.92
GTF2A1-204ENST00000556268 HLA-EP13747 358 aa9.29□□□□□ -0.92
GTF2A1-204ENST00000556268 GRK6P43250 576 aa9.29□□□□□ -0.92
GTF2A1-204ENST00000556268 ME1P48163 572 aa9.29□□□□□ -0.92
GTF2A1-204ENST00000556268 YWHAGP61981 247 aaKnown RBP eCLIP9.29□□□□□ -0.92
GTF2A1-204ENST00000556268 MPP7Q5T2T1 576 aa9.29□□□□□ -0.92
GTF2A1-204ENST00000556268 KRT39Q6A163 491 aa9.29□□□□□ -0.92
GTF2A1-204ENST00000556268 SERPINA13PQ6UXR4 307 aa9.29□□□□□ -0.92
GTF2A1-204ENST00000556268 MARCH9Q86YJ5 346 aa9.29□□□□□ -0.92
GTF2A1-204ENST00000556268 ZC3H3Q8IXZ2 948 aaKnown RBP9.29□□□□□ -0.92
GTF2A1-204ENST00000556268 CEP57L1Q8IYX8 460 aa9.29□□□□□ -0.92
GTF2A1-204ENST00000556268 WFIKKN2Q8TEU8 576 aa9.29□□□□□ -0.92
GTF2A1-204ENST00000556268 AZIN2Q96A70 460 aa9.29□□□□□ -0.92
GTF2A1-204ENST00000556268 IMPG2Q9BZV3 1241 aa9.29□□□□□ -0.92
GTF2A1-204ENST00000556268 CIPCQ9C0C6 399 aa9.29□□□□□ -0.92
GTF2A1-204ENST00000556268 LHX5Q9H2C1 402 aa9.29□□□□□ -0.92
GTF2A1-204ENST00000556268 SGK2Q9HBY8 427 aa9.29□□□□□ -0.92
GTF2A1-204ENST00000556268 CISHQ9NSE2 258 aa9.29□□□□□ -0.92
GTF2A1-204ENST00000556268 EXOC1Q9NV70 894 aa9.29□□□□□ -0.92
GTF2A1-204ENST00000556268 SUN2Q9UH99 717 aa9.29□□□□□ -0.92
GTF2A1-204ENST00000556268 RASAL2Q9UJF2 1139 aa9.29□□□□□ -0.92
GTF2A1-204ENST00000556268 CFAP45Q9UL16 551 aa9.29□□□□□ -0.92
GTF2A1-204ENST00000556268 WDR3Q9UNX4 943 aaKnown RBP eCLIP9.29□□□□□ -0.92
GTF2A1-204ENST00000556268 HPSEQ9Y251 543 aa9.29□□□□□ -0.92
GTF2A1-204ENST00000556268 CKAP5Q14008 2032 aa9.29□□□□□ -0.92
GTF2A1-204ENST00000556268 HELZ2Q9BYK8 2649 aaKnown RBP9.29□□□□□ -0.92
GTF2A1-204ENST00000556268 MYH10P35580 1976 aa9.28□□□□□ -0.92
GTF2A1-204ENST00000556268 TULP2O00295 520 aa9.28□□□□□ -0.92
GTF2A1-204ENST00000556268 KIF20AO95235 890 aa9.28□□□□□ -0.92
GTF2A1-204ENST00000556268 SEMA4FO95754 770 aa9.28□□□□□ -0.92
GTF2A1-204ENST00000556268 IGHV4-34P06331 123 aa9.28□□□□□ -0.92
GTF2A1-204ENST00000556268 DLDP09622 509 aaKnown RBP9.28□□□□□ -0.92
GTF2A1-204ENST00000556268 C1SP09871 688 aa9.28□□□□□ -0.92
GTF2A1-204ENST00000556268 TRIM49P0CI25 452 aa9.28□□□□□ -0.92
GTF2A1-204ENST00000556268 TRIM49CP0CI26 452 aa9.28□□□□□ -0.92
GTF2A1-204ENST00000556268 CD58P19256 250 aa9.28□□□□□ -0.92
GTF2A1-204ENST00000556268 NR2F2P24468 414 aa9.28□□□□□ -0.92
GTF2A1-204ENST00000556268 HOXC12P31275 282 aa9.28□□□□□ -0.92
GTF2A1-204ENST00000556268 PSMC2P35998 433 aaKnown RBP9.28□□□□□ -0.92
GTF2A1-204ENST00000556268 ECI1P42126 302 aa9.28□□□□□ -0.92
GTF2A1-204ENST00000556268 HARS2P49590 506 aaKnown RBP9.28□□□□□ -0.92
GTF2A1-204ENST00000556268 TKTL1P51854 596 aa9.28□□□□□ -0.92
GTF2A1-204ENST00000556268 ADAM9Q13443 819 aa9.28□□□□□ -0.92
GTF2A1-204ENST00000556268 SF1Q15637 639 aaKnown RBP9.28□□□□□ -0.92
GTF2A1-204ENST00000556268 PRSS53Q2L4Q9 553 aa9.28□□□□□ -0.92
GTF2A1-204ENST00000556268 TCERG1LQ5VWI1 586 aa9.28□□□□□ -0.92
GTF2A1-204ENST00000556268 BSPRYQ5W0U4 402 aa9.28□□□□□ -0.92
GTF2A1-204ENST00000556268 USP30Q70CQ3 517 aa9.28□□□□□ -0.92
GTF2A1-204ENST00000556268 FAM124AQ86V42 546 aa9.28□□□□□ -0.92
GTF2A1-204ENST00000556268 TMPRSS12Q86WS5 348 aa9.28□□□□□ -0.92
GTF2A1-204ENST00000556268 FMNL3Q8IVF7 1028 aa9.28□□□□□ -0.92
GTF2A1-204ENST00000556268 SCML4Q8N228 414 aa9.28□□□□□ -0.92
GTF2A1-204ENST00000556268 GUF1Q8N442 669 aaKnown RBP9.28□□□□□ -0.92
GTF2A1-204ENST00000556268 NETO2Q8NC67 525 aa9.28□□□□□ -0.92
GTF2A1-204ENST00000556268 KCTD13Q8WZ19 329 aa9.28□□□□□ -0.92
GTF2A1-204ENST00000556268 NDRG1Q92597 394 aaKnown RBP9.28□□□□□ -0.92
GTF2A1-204ENST00000556268 SNX21Q969T3 373 aa9.28□□□□□ -0.92
GTF2A1-204ENST00000556268 TTC17Q96AE7 1141 aa9.28□□□□□ -0.92
GTF2A1-204ENST00000556268 ULBP1Q9BZM6 244 aa9.28□□□□□ -0.92
GTF2A1-204ENST00000556268 BTBD1Q9H0C5 482 aa9.28□□□□□ -0.92
GTF2A1-204ENST00000556268 RSPH9Q9H1X1 276 aaPredicted RBP9.28□□□□□ -0.92
GTF2A1-204ENST00000556268 OLA1Q9NTK5 396 aaKnown RBP9.28□□□□□ -0.92
GTF2A1-204ENST00000556268 RAB20Q9NX57 234 aa9.28□□□□□ -0.92
GTF2A1-204ENST00000556268 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP9.28□□□□□ -0.925e-7■■■■■ 35.3
GTF2A1-204ENST00000556268 COQ4Q9Y3A0 265 aa9.28□□□□□ -0.92
GTF2A1-204ENST00000556268 PCDHGA1Q9Y5H4 931 aa9.28□□□□□ -0.92
GTF2A1-204ENST00000556268 GCN1Q92616 2671 aaKnown RBP9.27□□□□□ -0.93
GTF2A1-204ENST00000556268 A0A1B0GTQ1 180 aa9.27□□□□□ -0.93
GTF2A1-204ENST00000556268 YJEFN3A6XGL0 299 aa9.27□□□□□ -0.93
GTF2A1-204ENST00000556268 E7ENQ6 273 aa9.27□□□□□ -0.93
GTF2A1-204ENST00000556268 XPO1O14980 1071 aaKnown RBP9.27□□□□□ -0.93
GTF2A1-204ENST00000556268 VILLO15195 856 aa9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms