RNA–Protein interactions for RNA: ENST00000556082.5

ATXN3-235, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 660 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-235ENST00000556082 HARS2P49590 506 aaKnown RBP8.41□□□□□ -1.06
ATXN3-235ENST00000556082 CDH4P55283 916 aa8.41□□□□□ -1.06
ATXN3-235ENST00000556082 PPARDQ03181 441 aa8.41□□□□□ -1.06
ATXN3-235ENST00000556082 ILF2Q12905 390 aaKnown RBP8.41□□□□□ -1.06
ATXN3-235ENST00000556082 IFT88Q13099 833 aa8.41□□□□□ -1.06
ATXN3-235ENST00000556082 PLD1Q13393 1074 aa8.41□□□□□ -1.06
ATXN3-235ENST00000556082 SERINC3Q13530 473 aa8.41□□□□□ -1.06
ATXN3-235ENST00000556082 VEPH1Q14D04 833 aa8.41□□□□□ -1.06
ATXN3-235ENST00000556082 POLD3Q15054 466 aaPredicted RBP8.41□□□□□ -1.06
ATXN3-235ENST00000556082 SEPT7Q16181 437 aaKnown RBP8.41□□□□□ -1.06
ATXN3-235ENST00000556082 INSCQ1MX18 579 aa8.41□□□□□ -1.06
ATXN3-235ENST00000556082 PABPC1LQ4VXU2 614 aaKnown RBP8.41□□□□□ -1.06
ATXN3-235ENST00000556082 LACTB2Q53H82 288 aaPredicted RBP8.41□□□□□ -1.06
ATXN3-235ENST00000556082 TMCO4Q5TGY1 634 aa8.41□□□□□ -1.06
ATXN3-235ENST00000556082 RAP1GAP2Q684P5 730 aa8.41□□□□□ -1.06
ATXN3-235ENST00000556082 KDELC1Q6UW63 502 aa8.41□□□□□ -1.06
ATXN3-235ENST00000556082 CHST9Q7L1S5 443 aa8.41□□□□□ -1.06
ATXN3-235ENST00000556082 NECAB2Q7Z6G3 386 aa8.41□□□□□ -1.06
ATXN3-235ENST00000556082 TRIM42Q8IWZ5 723 aa8.41□□□□□ -1.06
ATXN3-235ENST00000556082 DTWD1Q8N5C7 304 aa8.41□□□□□ -1.06
ATXN3-235ENST00000556082 GDAP1Q8TB36 358 aa8.41□□□□□ -1.06
ATXN3-235ENST00000556082 RAB3IL1Q8TBN0 382 aa8.41□□□□□ -1.06
ATXN3-235ENST00000556082 LRRC8CQ8TDW0 803 aa8.41□□□□□ -1.06
ATXN3-235ENST00000556082 NSMCE1Q8WV22 266 aa8.41□□□□□ -1.06
ATXN3-235ENST00000556082 CCT6BQ92526 530 aa8.41□□□□□ -1.06
ATXN3-235ENST00000556082 TTC9Q92623 222 aa8.41□□□□□ -1.06
ATXN3-235ENST00000556082 ZNF75CPQ92670 426 aaPredicted RBP8.41□□□□□ -1.06
ATXN3-235ENST00000556082 HMCESQ96FZ2 354 aa8.41□□□□□ -1.06
ATXN3-235ENST00000556082 MYO19Q96H55 970 aa8.41□□□□□ -1.06
ATXN3-235ENST00000556082 ZNF419Q96HQ0 510 aaPredicted RBP8.41□□□□□ -1.06
ATXN3-235ENST00000556082 PAWRQ96IZ0 340 aaKnown RBP8.41□□□□□ -1.06
ATXN3-235ENST00000556082 ZNF512Q96ME7 567 aaPredicted RBP8.41□□□□□ -1.06
ATXN3-235ENST00000556082 RANBP9Q96S59 729 aa8.41□□□□□ -1.06
ATXN3-235ENST00000556082 SRPK1Q96SB4 655 aaKnown RBP8.41□□□□□ -1.06
ATXN3-235ENST00000556082 ELAC2Q9BQ52 826 aaKnown RBP8.41□□□□□ -1.06
ATXN3-235ENST00000556082 TBL1YQ9BQ87 522 aa8.41□□□□□ -1.06
ATXN3-235ENST00000556082 MCMBPQ9BTE3 642 aa8.41□□□□□ -1.06
ATXN3-235ENST00000556082 PITPNM3Q9BZ71 974 aa8.41□□□□□ -1.06
ATXN3-235ENST00000556082 UGT1A7Q9HAW7 530 aa8.41□□□□□ -1.06
ATXN3-235ENST00000556082 UGT1A10Q9HAW8 530 aa8.41□□□□□ -1.06
ATXN3-235ENST00000556082 UGT1A8Q9HAW9 530 aa8.41□□□□□ -1.06
ATXN3-235ENST00000556082 CYP4F11Q9HBI6 524 aa8.41□□□□□ -1.06
ATXN3-235ENST00000556082 MLXIPLQ9NP71 852 aa8.41□□□□□ -1.06
ATXN3-235ENST00000556082 IL23AQ9NPF7 189 aa8.41□□□□□ -1.06
ATXN3-235ENST00000556082 TPSG1Q9NRR2 321 aa8.41□□□□□ -1.06
ATXN3-235ENST00000556082 FGFR1OP2Q9NVK5 253 aa8.41□□□□□ -1.06
ATXN3-235ENST00000556082 HAUS2Q9NVX0 235 aa8.41□□□□□ -1.06
ATXN3-235ENST00000556082 UXTQ9UBK9 157 aaPredicted RBP8.41□□□□□ -1.06
ATXN3-235ENST00000556082 DCDC2Q9UHG0 476 aa8.41□□□□□ -1.06
ATXN3-235ENST00000556082 GRID1Q9ULK0 1009 aa8.41□□□□□ -1.06
ATXN3-235ENST00000556082 ARL2BPQ9Y2Y0 163 aa8.41□□□□□ -1.06
ATXN3-235ENST00000556082 RRP15Q9Y3B9 282 aaKnown RBP8.41□□□□□ -1.06
ATXN3-235ENST00000556082 ASB3Q9Y575 518 aa8.41□□□□□ -1.06
ATXN3-235ENST00000556082 HTTP42858 3142 aa8.41□□□□□ -1.06
ATXN3-235ENST00000556082 ILVBLA1L0T0 632 aa8.4□□□□□ -1.06
ATXN3-235ENST00000556082 F5H423 210 aaPredicted RBP8.4□□□□□ -1.06
ATXN3-235ENST00000556082 H3BNC9 293 aa8.4□□□□□ -1.06
ATXN3-235ENST00000556082 COCHO43405 550 aa8.4□□□□□ -1.06
ATXN3-235ENST00000556082 PRAMEF11O60813 436 aa8.4□□□□□ -1.06
ATXN3-235ENST00000556082 EDF1O60869 148 aaKnown RBP8.4□□□□□ -1.06
ATXN3-235ENST00000556082 USP12O75317 370 aa8.4□□□□□ -1.06
ATXN3-235ENST00000556082 CLDN11O75508 207 aa8.4□□□□□ -1.06
ATXN3-235ENST00000556082 PAPSS2O95340 614 aaPredicted RBP8.4□□□□□ -1.06
ATXN3-235ENST00000556082 TGDSO95455 350 aa8.4□□□□□ -1.06
ATXN3-235ENST00000556082 C1RP00736 705 aa8.4□□□□□ -1.06
ATXN3-235ENST00000556082 H2AFB1P0C5Y9 115 aa8.4□□□□□ -1.06
ATXN3-235ENST00000556082 H2AFB2P0C5Z0 115 aa8.4□□□□□ -1.06
ATXN3-235ENST00000556082 RAG1P15918 1043 aa8.4□□□□□ -1.06
ATXN3-235ENST00000556082 PFKLP17858 780 aa8.4□□□□□ -1.06
ATXN3-235ENST00000556082 CES1P23141 567 aa8.4□□□□□ -1.06
ATXN3-235ENST00000556082 ADRA1DP25100 572 aa8.4□□□□□ -1.06
ATXN3-235ENST00000556082 ITGB8P26012 769 aa8.4□□□□□ -1.06
ATXN3-235ENST00000556082 WEE1P30291 646 aa8.4□□□□□ -1.06
ATXN3-235ENST00000556082 OR1E1P30953 314 aa8.4□□□□□ -1.06
ATXN3-235ENST00000556082 ELF1P32519 619 aa8.4□□□□□ -1.06
ATXN3-235ENST00000556082 SPRP35270 261 aaPredicted RBP8.4□□□□□ -1.06
ATXN3-235ENST00000556082 KCNQ1P51787 676 aa8.4□□□□□ -1.06
ATXN3-235ENST00000556082 EPHB3P54753 998 aa8.4□□□□□ -1.06
ATXN3-235ENST00000556082 CSE1LP55060 971 aaKnown RBP8.4□□□□□ -1.06
ATXN3-235ENST00000556082 CRADDP78560 199 aa8.4□□□□□ -1.06
ATXN3-235ENST00000556082 DEFB103AP81534 67 aa8.4□□□□□ -1.06
ATXN3-235ENST00000556082 HTRA4P83105 476 aaPredicted RBP8.4□□□□□ -1.06
ATXN3-235ENST00000556082 ADGRE1Q14246 886 aa8.4□□□□□ -1.06
ATXN3-235ENST00000556082 RFTN1Q14699 578 aaPredicted RBP8.4□□□□□ -1.06
ATXN3-235ENST00000556082 C11orf91Q3C1V1 193 aa8.4□□□□□ -1.06
ATXN3-235ENST00000556082 FAM133BQ5BKY9 247 aaKnown RBP8.4□□□□□ -1.06
ATXN3-235ENST00000556082 RABGAP1LQ5R372 815 aa8.4□□□□□ -1.06
ATXN3-235ENST00000556082 SPOUT1Q5T280 376 aaKnown RBP8.4□□□□□ -1.06
ATXN3-235ENST00000556082 CERCAMQ5T4B2 595 aa8.4□□□□□ -1.06
ATXN3-235ENST00000556082 TEDDM1Q5T9Z0 273 aa8.4□□□□□ -1.06
ATXN3-235ENST00000556082 RNF43Q68DV7 783 aa8.4□□□□□ -1.06
ATXN3-235ENST00000556082 PDPK2PQ6A1A2 396 aa8.4□□□□□ -1.06
ATXN3-235ENST00000556082 ALG1LQ6GMV1 187 aa8.4□□□□□ -1.06
ATXN3-235ENST00000556082 ZNF783Q6ZMS7 281 aa8.4□□□□□ -1.06
ATXN3-235ENST00000556082 NLRP9Q7RTR0 991 aa8.4□□□□□ -1.06
ATXN3-235ENST00000556082 SPATA21Q7Z572 469 aa8.4□□□□□ -1.06
ATXN3-235ENST00000556082 DNAJB7Q7Z6W7 309 aaPredicted RBP8.4□□□□□ -1.06
ATXN3-235ENST00000556082 SETD3Q86TU7 594 aaPredicted RBP8.4□□□□□ -1.06
ATXN3-235ENST00000556082 ITIH5Q86UX2 942 aa8.4□□□□□ -1.06
ATXN3-235ENST00000556082 LCA5Q86VQ0 697 aa8.4□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms