RNA–Protein interactions for RNA: ENST00000556066.1

PSEN1-216, Transcript of presenilin 1, humanhuman

TSL 3

Gene PSEN1, Length 612 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-216ENST00000556066 KRIT1O00522 736 aa6.81□□□□□ -1.32
PSEN1-216ENST00000556066 NEMP1O14524 444 aa6.81□□□□□ -1.32
PSEN1-216ENST00000556066 FFAR2O15552 330 aa6.81□□□□□ -1.32
PSEN1-216ENST00000556066 SIGLEC6O43699 453 aa6.81□□□□□ -1.32
PSEN1-216ENST00000556066 ZMPSTE24O75844 475 aa6.81□□□□□ -1.32
PSEN1-216ENST00000556066 CYP1A1P04798 512 aaPredicted RBP6.81□□□□□ -1.32
PSEN1-216ENST00000556066 PLEKP08567 350 aaPredicted RBP6.81□□□□□ -1.32
PSEN1-216ENST00000556066 C1SP09871 688 aa6.81□□□□□ -1.32
PSEN1-216ENST00000556066 KRT3P12035 628 aa6.81□□□□□ -1.32
PSEN1-216ENST00000556066 ADRB3P13945 408 aa6.81□□□□□ -1.32
PSEN1-216ENST00000556066 HNRNPA2B1P22626 353 aaKnown RBP6.81□□□□□ -1.32
PSEN1-216ENST00000556066 GKP32189 559 aa6.81□□□□□ -1.32
PSEN1-216ENST00000556066 RFC1P35251 1148 aaPredicted RBP6.81□□□□□ -1.32
PSEN1-216ENST00000556066 ADRA1BP35368 520 aa6.81□□□□□ -1.32
PSEN1-216ENST00000556066 ETFBP38117 255 aa6.81□□□□□ -1.32
PSEN1-216ENST00000556066 RXRGP48443 463 aa6.81□□□□□ -1.32
PSEN1-216ENST00000556066 ACADVLP49748 655 aa6.81□□□□□ -1.32
PSEN1-216ENST00000556066 CCNHP51946 323 aaPredicted RBP6.81□□□□□ -1.32
PSEN1-216ENST00000556066 NEK3P51956 506 aa6.81□□□□□ -1.32
PSEN1-216ENST00000556066 GDF10P55107 478 aa6.81□□□□□ -1.32
PSEN1-216ENST00000556066 JAM2P57087 298 aa6.81□□□□□ -1.32
PSEN1-216ENST00000556066 ARF5P84085 180 aa6.81□□□□□ -1.32
PSEN1-216ENST00000556066 DAB2P98082 770 aa6.81□□□□□ -1.32
PSEN1-216ENST00000556066 MYL5Q02045 173 aa6.81□□□□□ -1.32
PSEN1-216ENST00000556066 CCDC173Q0VFZ6 552 aa6.81□□□□□ -1.32
PSEN1-216ENST00000556066 POLD3Q15054 466 aaPredicted RBP6.81□□□□□ -1.32
PSEN1-216ENST00000556066 COL28A1Q2UY09 1125 aa6.81□□□□□ -1.32
PSEN1-216ENST00000556066 ZNF542PQ5EBM4 170 aa6.81□□□□□ -1.32
PSEN1-216ENST00000556066 CARD16Q5EG05 197 aa6.81□□□□□ -1.32
PSEN1-216ENST00000556066 HES3Q5TGS1 186 aa6.81□□□□□ -1.32
PSEN1-216ENST00000556066 FAM72AQ5TYM5 149 aa6.81□□□□□ -1.32
PSEN1-216ENST00000556066 FAM72DQ6L9T8 149 aa6.81□□□□□ -1.32
PSEN1-216ENST00000556066 NEK5Q6P3R8 708 aa6.81□□□□□ -1.32
PSEN1-216ENST00000556066 SCYL2Q6P3W7 929 aa6.81□□□□□ -1.32
PSEN1-216ENST00000556066 ZNF783Q6ZMS7 281 aa6.81□□□□□ -1.32
PSEN1-216ENST00000556066 ARCQ7LC44 396 aa6.81□□□□□ -1.32
PSEN1-216ENST00000556066 TMC6Q7Z403 805 aa6.81□□□□□ -1.32
PSEN1-216ENST00000556066 BNIPLQ7Z465 357 aa6.81□□□□□ -1.32
PSEN1-216ENST00000556066 PTAR1Q7Z6K3 402 aaPredicted RBP6.81□□□□□ -1.32
PSEN1-216ENST00000556066 TMPRSS12Q86WS5 348 aa6.81□□□□□ -1.32
PSEN1-216ENST00000556066 FAM72BQ86X60 149 aa6.81□□□□□ -1.32
PSEN1-216ENST00000556066 PCDH20Q8N6Y1 951 aaKnown RBP6.81□□□□□ -1.32
PSEN1-216ENST00000556066 CCDC185Q8N715 623 aa6.81□□□□□ -1.32
PSEN1-216ENST00000556066 TMEM145Q8NBT3 493 aa6.81□□□□□ -1.32
PSEN1-216ENST00000556066 SERBP1Q8NC51 408 aaKnown RBP eCLIP6.81□□□□□ -1.32
PSEN1-216ENST00000556066 OR13H1Q8NG92 308 aa6.81□□□□□ -1.32
PSEN1-216ENST00000556066 FAM172AQ8WUF8 416 aa6.81□□□□□ -1.32
PSEN1-216ENST00000556066 TBC1D31Q96DN5 1066 aa6.81□□□□□ -1.32
PSEN1-216ENST00000556066 PCDHB18PQ96TA0 734 aa6.81□□□□□ -1.32
PSEN1-216ENST00000556066 FUCA2Q9BTY2 467 aa6.81□□□□□ -1.32
PSEN1-216ENST00000556066 SELENOOQ9BVL4 669 aa6.81□□□□□ -1.32
PSEN1-216ENST00000556066 HDAC8Q9BY41 377 aa6.81□□□□□ -1.32
PSEN1-216ENST00000556066 CEP44Q9C0F1 390 aa6.81□□□□□ -1.32
PSEN1-216ENST00000556066 CAAP1Q9H8G2 361 aa6.81□□□□□ -1.32
PSEN1-216ENST00000556066 ETNK1Q9HBU6 452 aa6.81□□□□□ -1.32
PSEN1-216ENST00000556066 NDFIP2Q9NV92 336 aa6.81□□□□□ -1.32
PSEN1-216ENST00000556066 ANO10Q9NW15 660 aa6.81□□□□□ -1.32
PSEN1-216ENST00000556066 DNAJC28Q9NX36 388 aa6.81□□□□□ -1.32
PSEN1-216ENST00000556066 ADAM22Q9P0K1 906 aa6.81□□□□□ -1.32
PSEN1-216ENST00000556066 HECAQ9UBI9 543 aaPredicted RBP6.81□□□□□ -1.32
PSEN1-216ENST00000556066 PPARGC1AQ9UBK2 798 aaKnown RBP6.81□□□□□ -1.32
PSEN1-216ENST00000556066 ZNF212Q9UDV6 495 aa6.81□□□□□ -1.32
PSEN1-216ENST00000556066 ZFR2Q9UPR6 939 aaKnown RBP6.81□□□□□ -1.32
PSEN1-216ENST00000556066 SIK3Q9Y2K2 1263 aa6.81□□□□□ -1.32
PSEN1-216ENST00000556066 TMA7Q9Y2S6 64 aaKnown RBP6.81□□□□□ -1.32
PSEN1-216ENST00000556066 PCDHGA1Q9Y5H4 931 aa6.81□□□□□ -1.32
PSEN1-216ENST00000556066 AK5Q9Y6K8 562 aa6.81□□□□□ -1.32
PSEN1-216ENST00000556066 C16orf96A6NNT2 1141 aa6.8□□□□□ -1.32
PSEN1-216ENST00000556066 A6NNZ2 444 aa6.8□□□□□ -1.32
PSEN1-216ENST00000556066 LGALS16A8MUM7 142 aa6.8□□□□□ -1.32
PSEN1-216ENST00000556066 TRIM38O00635 465 aa6.8□□□□□ -1.32
PSEN1-216ENST00000556066 BUB1O43683 1085 aa6.8□□□□□ -1.32
PSEN1-216ENST00000556066 CREB3O43889 395 aa6.8□□□□□ -1.32
PSEN1-216ENST00000556066 RAMP2O60895 175 aa6.8□□□□□ -1.32
PSEN1-216ENST00000556066 ZNF821O75541 412 aaPredicted RBP6.8□□□□□ -1.32
PSEN1-216ENST00000556066 LRIG2O94898 1065 aa6.8□□□□□ -1.32
PSEN1-216ENST00000556066 PAK4O96013 591 aaPredicted RBP6.8□□□□□ -1.32
PSEN1-216ENST00000556066 CALB1P05937 261 aa6.8□□□□□ -1.32
PSEN1-216ENST00000556066 CDK4P11802 303 aa6.8□□□□□ -1.32
PSEN1-216ENST00000556066 UNGP13051 313 aaPredicted RBP6.8□□□□□ -1.32
PSEN1-216ENST00000556066 RHOQP17081 205 aa6.8□□□□□ -1.32
PSEN1-216ENST00000556066 CKMT2P17540 419 aa6.8□□□□□ -1.32
PSEN1-216ENST00000556066 GPD1P21695 349 aa6.8□□□□□ -1.32
PSEN1-216ENST00000556066 DGKAP23743 735 aa6.8□□□□□ -1.32
PSEN1-216ENST00000556066 ITGB7P26010 798 aa6.8□□□□□ -1.32
PSEN1-216ENST00000556066 L1CAMP32004 1257 aa6.8□□□□□ -1.32
PSEN1-216ENST00000556066 PTGIRP43119 386 aa6.8□□□□□ -1.32
PSEN1-216ENST00000556066 PTPN9P43378 593 aa6.8□□□□□ -1.32
PSEN1-216ENST00000556066 MAPKAPK2P49137 400 aa6.8□□□□□ -1.32
PSEN1-216ENST00000556066 HDAC4P56524 1084 aa6.8□□□□□ -1.32
PSEN1-216ENST00000556066 RP1P56715 2156 aa6.8□□□□□ -1.32
PSEN1-216ENST00000556066 GEMIN4P57678 1058 aaKnown RBP6.8□□□□□ -1.32
PSEN1-216ENST00000556066 SNRPD1P62314 119 aaKnown RBP6.8□□□□□ -1.32
PSEN1-216ENST00000556066 RPS21P63220 83 aaKnown RBP6.8□□□□□ -1.32
PSEN1-216ENST00000556066 SEMG2Q02383 582 aa6.8□□□□□ -1.32
PSEN1-216ENST00000556066 TARDBPQ13148 414 aaKnown RBP eCLIP6.8□□□□□ -1.32
PSEN1-216ENST00000556066 SGCGQ13326 291 aa6.8□□□□□ -1.32
PSEN1-216ENST00000556066 STX1AQ16623 288 aa6.8□□□□□ -1.32
PSEN1-216ENST00000556066 SWI5Q1ZZU3 235 aa6.8□□□□□ -1.32
PSEN1-216ENST00000556066 CLEC16AQ2KHT3 1053 aa6.8□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms