RNA–Protein interactions for RNA: ENST00000555905.5

TMEM260-208, Transcript of transmembrane protein 260, humanhuman

TSL 5

Gene TMEM260, Length 766 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-208ENST00000555905 SERPINA4P29622 427 aa11.15□□□□□ -0.62
TMEM260-208ENST00000555905 CCNHP51946 323 aaPredicted RBP11.15□□□□□ -0.62
TMEM260-208ENST00000555905 ARL4CP56559 192 aa11.15□□□□□ -0.62
TMEM260-208ENST00000555905 FOXK1P85037 733 aa11.15□□□□□ -0.62
TMEM260-208ENST00000555905 CDK18Q07002 472 aa11.15□□□□□ -0.62
TMEM260-208ENST00000555905 BCL2L1Q07817 233 aa11.15□□□□□ -0.62
TMEM260-208ENST00000555905 SPARCL1Q14515 664 aa11.15□□□□□ -0.62
TMEM260-208ENST00000555905 BRD3Q15059 726 aa11.15□□□□□ -0.62
TMEM260-208ENST00000555905 HIF1AQ16665 826 aa11.15□□□□□ -0.62
TMEM260-208ENST00000555905 HNRNPA1L2Q32P51 320 aaKnown RBP11.15□□□□□ -0.62
TMEM260-208ENST00000555905 FBXO43Q4G163 708 aa11.15□□□□□ -0.62
TMEM260-208ENST00000555905 DNAJC21Q5F1R6 531 aaKnown RBP11.15□□□□□ -0.62
TMEM260-208ENST00000555905 EMC10Q5UCC4 262 aa11.15□□□□□ -0.62
TMEM260-208ENST00000555905 KDELC1Q6UW63 502 aa11.15□□□□□ -0.62
TMEM260-208ENST00000555905 DPY19L3Q6ZPD9 716 aa11.15□□□□□ -0.62
TMEM260-208ENST00000555905 CENPUQ71F23 418 aa11.15□□□□□ -0.62
TMEM260-208ENST00000555905 KDELC2Q7Z4H8 507 aa11.15□□□□□ -0.62
TMEM260-208ENST00000555905 CHPFQ8IZ52 775 aa11.15□□□□□ -0.62
TMEM260-208ENST00000555905 PDIK1LQ8N165 341 aa11.15□□□□□ -0.62
TMEM260-208ENST00000555905 PAF1Q8N7H5 531 aa11.15□□□□□ -0.62
TMEM260-208ENST00000555905 DNAAF3Q8N9W5 541 aa11.15□□□□□ -0.62
TMEM260-208ENST00000555905 OR2A12Q8NGT7 310 aa11.15□□□□□ -0.62
TMEM260-208ENST00000555905 OR6K2Q8NGY2 324 aa11.15□□□□□ -0.62
TMEM260-208ENST00000555905 FEM1CQ96JP0 617 aa11.15□□□□□ -0.62
TMEM260-208ENST00000555905 MRGPRX2Q96LB1 330 aa11.15□□□□□ -0.62
TMEM260-208ENST00000555905 HEPHQ9BQS7 1158 aa11.15□□□□□ -0.62
TMEM260-208ENST00000555905 ADGRE3Q9BY15 652 aa11.15□□□□□ -0.62
TMEM260-208ENST00000555905 CPEB1Q9BZB8 566 aaKnown RBP11.15□□□□□ -0.62
TMEM260-208ENST00000555905 TMEM245Q9H330 911 aa11.15□□□□□ -0.62
TMEM260-208ENST00000555905 ZDHHC6Q9H6R6 413 aa11.15□□□□□ -0.62
TMEM260-208ENST00000555905 ARHGEF3Q9NR81 526 aa11.15□□□□□ -0.62
TMEM260-208ENST00000555905 ARGLU1Q9NWB6 273 aaPredicted RBP11.15□□□□□ -0.62
TMEM260-208ENST00000555905 MRPS17Q9Y2R5 130 aaKnown RBP11.15□□□□□ -0.62
TMEM260-208ENST00000555905 RAI2Q9Y5P3 530 aa11.15□□□□□ -0.62
TMEM260-208ENST00000555905 STON1Q9Y6Q2 735 aa11.15□□□□□ -0.62
TMEM260-208ENST00000555905 WASH3PC4AMC7 463 aa11.14□□□□□ -0.63
TMEM260-208ENST00000555905 SYNCRIPO60506 623 aaKnown RBP11.14□□□□□ -0.63
TMEM260-208ENST00000555905 SOCS5O75159 536 aa11.14□□□□□ -0.63
TMEM260-208ENST00000555905 USP12O75317 370 aa11.14□□□□□ -0.63
TMEM260-208ENST00000555905 AGTP01019 485 aa11.14□□□□□ -0.63
TMEM260-208ENST00000555905 EPOP01588 193 aa11.14□□□□□ -0.63
TMEM260-208ENST00000555905 EPHX1P07099 455 aa11.14□□□□□ -0.63
TMEM260-208ENST00000555905 MYBL2P10244 700 aa11.14□□□□□ -0.63
TMEM260-208ENST00000555905 HLA-EP13747 358 aa11.14□□□□□ -0.63
TMEM260-208ENST00000555905 PRKCHP24723 683 aa11.14□□□□□ -0.63
TMEM260-208ENST00000555905 ECHS1P30084 290 aa11.14□□□□□ -0.63
TMEM260-208ENST00000555905 ADRA1AP35348 466 aa11.14□□□□□ -0.63
TMEM260-208ENST00000555905 IL12RB1P42701 662 aa11.14□□□□□ -0.63
TMEM260-208ENST00000555905 KIR2DL1P43626 348 aaPredicted RBP11.14□□□□□ -0.63
TMEM260-208ENST00000555905 MRPS21P82921 87 aaKnown RBP11.14□□□□□ -0.63
TMEM260-208ENST00000555905 CDH17Q12864 832 aa11.14□□□□□ -0.63
TMEM260-208ENST00000555905 DSG2Q14126 1118 aa11.14□□□□□ -0.63
TMEM260-208ENST00000555905 C2orf27AQ580R0 203 aa11.14□□□□□ -0.63
TMEM260-208ENST00000555905 CFAP58Q5T655 872 aa11.14□□□□□ -0.63
TMEM260-208ENST00000555905 LRRC8BQ6P9F7 803 aa11.14□□□□□ -0.63
TMEM260-208ENST00000555905 DSG4Q86SJ6 1040 aa11.14□□□□□ -0.63
TMEM260-208ENST00000555905 CCDC25Q86WR0 208 aa11.14□□□□□ -0.63
TMEM260-208ENST00000555905 GSPT2Q8IYD1 628 aaKnown RBP11.14□□□□□ -0.63
TMEM260-208ENST00000555905 GJD3Q8N144 294 aa11.14□□□□□ -0.63
TMEM260-208ENST00000555905 ZNF366Q8N895 744 aa11.14□□□□□ -0.63
TMEM260-208ENST00000555905 PDCD6IPQ8WUM4 868 aaKnown RBP11.14□□□□□ -0.63
TMEM260-208ENST00000555905 OR8D1Q8WZ84 308 aa11.14□□□□□ -0.63
TMEM260-208ENST00000555905 PTPRN2Q92932 1015 aa11.14□□□□□ -0.63
TMEM260-208ENST00000555905 LRIG1Q96JA1 1093 aa11.14□□□□□ -0.63
TMEM260-208ENST00000555905 ZNF641Q96N77 438 aaPredicted RBP11.14□□□□□ -0.63
TMEM260-208ENST00000555905 SERPINB12Q96P63 405 aa11.14□□□□□ -0.63
TMEM260-208ENST00000555905 APOL2Q9BQE5 337 aa11.14□□□□□ -0.63
TMEM260-208ENST00000555905 OSBPL1AQ9BXW6 950 aa11.14□□□□□ -0.63
TMEM260-208ENST00000555905 NEUROG2Q9H2A3 272 aa11.14□□□□□ -0.63
TMEM260-208ENST00000555905 CACNA2D2Q9NY47 1150 aa11.14□□□□□ -0.63
TMEM260-208ENST00000555905 IL36AQ9UHA7 158 aa11.14□□□□□ -0.63
TMEM260-208ENST00000555905 NDRG2Q9UN36 371 aaKnown RBP11.14□□□□□ -0.63
TMEM260-208ENST00000555905 PCDHGC4Q9Y5F7 938 aa11.14□□□□□ -0.63
TMEM260-208ENST00000555905 COL6A3P12111 3177 aa11.14□□□□□ -0.63
TMEM260-208ENST00000555905 LOC285095A0A1B0GVY8 99 aa11.13□□□□□ -0.63
TMEM260-208ENST00000555905 A0A1W2PQ67 120 aa11.13□□□□□ -0.63
TMEM260-208ENST00000555905 CCDC151A5D8V7 595 aa11.13□□□□□ -0.63
TMEM260-208ENST00000555905 ALOX15BO15296 676 aa11.13□□□□□ -0.63
TMEM260-208ENST00000555905 EIF3HO15372 352 aaKnown RBP eCLIP11.13□□□□□ -0.63
TMEM260-208ENST00000555905 SIN3BO75182 1162 aa11.13□□□□□ -0.63
TMEM260-208ENST00000555905 PIGNO95427 931 aa11.13□□□□□ -0.63
TMEM260-208ENST00000555905 KLF8O95600 359 aaPredicted RBP11.13□□□□□ -0.63
TMEM260-208ENST00000555905 NDST3O95803 873 aa11.13□□□□□ -0.63
TMEM260-208ENST00000555905 PRNPP04156 253 aa11.13□□□□□ -0.63
TMEM260-208ENST00000555905 HLA-DPA1P20036 260 aa11.13□□□□□ -0.63
TMEM260-208ENST00000555905 CD72P21854 359 aa11.13□□□□□ -0.63
TMEM260-208ENST00000555905 NTSR1P30989 418 aa11.13□□□□□ -0.63
TMEM260-208ENST00000555905 GKP32189 559 aa11.13□□□□□ -0.63
TMEM260-208ENST00000555905 NPY2RP49146 381 aa11.13□□□□□ -0.63
TMEM260-208ENST00000555905 SESN2P58004 480 aaPredicted RBP11.13□□□□□ -0.63
TMEM260-208ENST00000555905 RPL26P61254 145 aaKnown RBP11.13□□□□□ -0.63
TMEM260-208ENST00000555905 ENPP2Q13822 863 aa11.13□□□□□ -0.63
TMEM260-208ENST00000555905 LRRC32Q14392 662 aa11.13□□□□□ -0.63
TMEM260-208ENST00000555905 ELAVL3Q14576 367 aaKnown RBP11.13□□□□□ -0.63
TMEM260-208ENST00000555905 IHHQ14623 411 aa11.13□□□□□ -0.63
TMEM260-208ENST00000555905 STARD3Q14849 445 aa11.13□□□□□ -0.63
TMEM260-208ENST00000555905 SLMAPQ14BN4 828 aa11.13□□□□□ -0.63
TMEM260-208ENST00000555905 SLC1A5Q15758 541 aa11.13□□□□□ -0.63
TMEM260-208ENST00000555905 BBS9Q3SYG4 887 aa11.13□□□□□ -0.63
TMEM260-208ENST00000555905 HSF5Q4G112 596 aaPredicted RBP11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms