RNA–Protein interactions for RNA: ENST00000555405.5

NEK9-205, Transcript of NIMA related kinase 9, humanhuman

TSL 1 (best)

Gene NEK9, Length 3,357 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-205ENST00000555405 HSPA9P38646 679 aaKnown RBP10.3□□□□□ -0.76
NEK9-205ENST00000555405 GYS2P54840 703 aa10.3□□□□□ -0.76
NEK9-205ENST00000555405 SNRPD1P62314 119 aaKnown RBP10.3□□□□□ -0.76
NEK9-205ENST00000555405 TMED2Q15363 201 aa10.3□□□□□ -0.76
NEK9-205ENST00000555405 ARSIQ5FYB1 569 aa10.3□□□□□ -0.76
NEK9-205ENST00000555405 SRLQ86TD4 932 aa10.3□□□□□ -0.76
NEK9-205ENST00000555405 AHI1Q8N157 1196 aa10.3□□□□□ -0.76
NEK9-205ENST00000555405 SH2D3CQ8N5H7 860 aa10.3□□□□□ -0.76
NEK9-205ENST00000555405 SUSD6Q92537 303 aa10.3□□□□□ -0.76
NEK9-205ENST00000555405 CAVIN3Q969G5 261 aa10.3□□□□□ -0.76
NEK9-205ENST00000555405 FAM136AQ96C01 138 aa10.3□□□□□ -0.76
NEK9-205ENST00000555405 IMP4Q96G21 291 aaKnown RBP10.3□□□□□ -0.76
NEK9-205ENST00000555405 KLHL32Q96NJ5 620 aa10.3□□□□□ -0.76
NEK9-205ENST00000555405 GORASP1Q9BQQ3 440 aa10.3□□□□□ -0.76
NEK9-205ENST00000555405 ABCG8Q9H221 673 aa10.3□□□□□ -0.76
NEK9-205ENST00000555405 SUDS3Q9H7L9 328 aaPredicted RBP10.3□□□□□ -0.76
NEK9-205ENST00000555405 PDFQ9HBH1 243 aa10.3□□□□□ -0.76
NEK9-205ENST00000555405 CA14Q9ULX7 337 aa10.3□□□□□ -0.76
NEK9-205ENST00000555405 PIAS3Q9Y6X2 628 aa10.3□□□□□ -0.76
NEK9-205ENST00000555405 NEMP1O14524 444 aa10.29□□□□□ -0.76
NEK9-205ENST00000555405 FAM155BO75949 473 aa10.29□□□□□ -0.76
NEK9-205ENST00000555405 VAPBO95292 243 aa10.29□□□□□ -0.76
NEK9-205ENST00000555405 APODP05090 189 aa10.29□□□□□ -0.76
NEK9-205ENST00000555405 TRAF2Q12933 501 aa10.29□□□□□ -0.76
NEK9-205ENST00000555405 GPS2Q13227 327 aa10.29□□□□□ -0.76
NEK9-205ENST00000555405 C22orf39Q6P5X5 142 aa10.29□□□□□ -0.76
NEK9-205ENST00000555405 PTAR1Q7Z6K3 402 aaPredicted RBP10.29□□□□□ -0.76
NEK9-205ENST00000555405 TTC7BQ86TV6 843 aa10.29□□□□□ -0.76
NEK9-205ENST00000555405 FAM217AQ8IXS0 508 aa10.29□□□□□ -0.76
NEK9-205ENST00000555405 AGGF1Q8N302 714 aaeCLIP10.29□□□□□ -0.76
NEK9-205ENST00000555405 SLC44A3Q8N4M1 653 aa10.29□□□□□ -0.76
NEK9-205ENST00000555405 NAT14Q8WUY8 206 aa10.29□□□□□ -0.76
NEK9-205ENST00000555405 UCMAQ8WVF2 138 aa10.29□□□□□ -0.76
NEK9-205ENST00000555405 GPR63Q9BZJ6 419 aa10.29□□□□□ -0.76
NEK9-205ENST00000555405 TSPYL1Q9H0U9 437 aa10.29□□□□□ -0.76
NEK9-205ENST00000555405 C20orf96Q9NUD7 363 aaPredicted RBP10.29□□□□□ -0.76
NEK9-205ENST00000555405 ARL5AQ9Y689 179 aa10.29□□□□□ -0.76
NEK9-205ENST00000555405 GOLGA4Q13439 2230 aaKnown RBP10.29□□□□□ -0.76
NEK9-205ENST00000555405 GOLGA8RI6L899 631 aa10.29□□□□□ -0.76
NEK9-205ENST00000555405 RASGRF2O14827 1237 aa10.29□□□□□ -0.76
NEK9-205ENST00000555405 ALOX15BO15296 676 aa10.29□□□□□ -0.76
NEK9-205ENST00000555405 PPFIA2O75334 1257 aa10.29□□□□□ -0.76
NEK9-205ENST00000555405 KRT15P19012 456 aa10.29□□□□□ -0.76
NEK9-205ENST00000555405 NMBRP28336 390 aa10.29□□□□□ -0.76
NEK9-205ENST00000555405 TNFRSF8P28908 595 aa10.29□□□□□ -0.76
NEK9-205ENST00000555405 NUMA1Q14980 2115 aa10.29□□□□□ -0.76
NEK9-205ENST00000555405 HSP90AA5PQ58FG0 334 aa10.29□□□□□ -0.76
NEK9-205ENST00000555405 SIRPB2Q5JXA9 342 aa10.29□□□□□ -0.76
NEK9-205ENST00000555405 ARMC12Q5T9G4 340 aa10.29□□□□□ -0.76
NEK9-205ENST00000555405 ESRP1Q6NXG1 681 aaKnown RBP10.29□□□□□ -0.76
NEK9-205ENST00000555405 LDB1Q86U70 411 aaPredicted RBP10.29□□□□□ -0.76
NEK9-205ENST00000555405 STK40Q8N2I9 435 aa10.29□□□□□ -0.76
NEK9-205ENST00000555405 TERB1Q8NA31 727 aa10.29□□□□□ -0.76
NEK9-205ENST00000555405 OR2AP1Q8NGE2 309 aa10.29□□□□□ -0.76
NEK9-205ENST00000555405 ELSPBP1Q96BH3 223 aa10.29□□□□□ -0.76
NEK9-205ENST00000555405 ARL8AQ96BM9 186 aa10.29□□□□□ -0.76
NEK9-205ENST00000555405 TXNDC16Q9P2K2 825 aa10.29□□□□□ -0.76
NEK9-205ENST00000555405 FBXL21Q9UKT6 434 aa10.29□□□□□ -0.76
NEK9-205ENST00000555405 OR51F1A6NGY5 319 aa10.29□□□□□ -0.76
NEK9-205ENST00000555405 CACNG3O60359 315 aa10.29□□□□□ -0.76
NEK9-205ENST00000555405 TPSB2P20231 275 aa10.29□□□□□ -0.76
NEK9-205ENST00000555405 SKOR1P84550 965 aa10.29□□□□□ -0.76
NEK9-205ENST00000555405 TPSAB1Q15661 275 aa10.29□□□□□ -0.76
NEK9-205ENST00000555405 EGFLAMQ63HQ2 1017 aa10.29□□□□□ -0.76
NEK9-205ENST00000555405 LRRC8BQ6P9F7 803 aa10.29□□□□□ -0.76
NEK9-205ENST00000555405 UNC5AQ6ZN44 842 aa10.29□□□□□ -0.76
NEK9-205ENST00000555405 ZNF534Q76KX8 674 aa10.29□□□□□ -0.76
NEK9-205ENST00000555405 LINC00523Q86TU6 105 aa10.29□□□□□ -0.76
NEK9-205ENST00000555405 MAFAQ8NHW3 353 aaPredicted RBP10.29□□□□□ -0.76
NEK9-205ENST00000555405 SIGLEC10Q96LC7 697 aa10.29□□□□□ -0.76
NEK9-205ENST00000555405 EBNA1BP2Q99848 306 aaKnown RBP10.29□□□□□ -0.76
NEK9-205ENST00000555405 PHF7Q9BWX1 381 aaPredicted RBP10.29□□□□□ -0.76
NEK9-205ENST00000555405 LHX3Q9UBR4 397 aa10.29□□□□□ -0.76
NEK9-205ENST00000555405 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP10.28□□□□□ -0.76
NEK9-205ENST00000555405 AURKAO14965 403 aa10.28□□□□□ -0.76
NEK9-205ENST00000555405 UGT1A9O60656 530 aa10.28□□□□□ -0.76
NEK9-205ENST00000555405 MMP2P08253 660 aa10.28□□□□□ -0.76
NEK9-205ENST00000555405 PHBP35232 272 aa10.28□□□□□ -0.76
NEK9-205ENST00000555405 OPRD1P41143 372 aa10.28□□□□□ -0.76
NEK9-205ENST00000555405 GEMIN4P57678 1058 aaKnown RBP10.28□□□□□ -0.76
NEK9-205ENST00000555405 GPX6P59796 221 aa10.28□□□□□ -0.76
NEK9-205ENST00000555405 PRAMEP78395 509 aa10.28□□□□□ -0.76
NEK9-205ENST00000555405 MPP3Q13368 585 aa10.28□□□□□ -0.76
NEK9-205ENST00000555405 HTR4Q13639 388 aa10.28□□□□□ -0.76
NEK9-205ENST00000555405 SLC1A5Q15758 541 aa10.28□□□□□ -0.76
NEK9-205ENST00000555405 KBTBD12Q3ZCT8 623 aa10.28□□□□□ -0.76
NEK9-205ENST00000555405 ALS2CLQ60I27 953 aa10.28□□□□□ -0.76
NEK9-205ENST00000555405 MMAAQ8IVH4 418 aaKnown RBP10.28□□□□□ -0.76
NEK9-205ENST00000555405 SPNS2Q8IVW8 549 aa10.28□□□□□ -0.76
NEK9-205ENST00000555405 PGBD3Q8N328 593 aa10.28□□□□□ -0.76
NEK9-205ENST00000555405 ZNF513Q8N8E2 541 aaPredicted RBP10.28□□□□□ -0.76
NEK9-205ENST00000555405 P2RY13Q9BPV8 354 aa10.28□□□□□ -0.76
NEK9-205ENST00000555405 WDR83Q9BRX9 315 aaKnown RBP10.28□□□□□ -0.76
NEK9-205ENST00000555405 UGT1A7Q9HAW7 530 aa10.28□□□□□ -0.76
NEK9-205ENST00000555405 UGT1A10Q9HAW8 530 aa10.28□□□□□ -0.76
NEK9-205ENST00000555405 UGT1A8Q9HAW9 530 aa10.28□□□□□ -0.76
NEK9-205ENST00000555405 NOVA2Q9UNW9 492 aaKnown RBP10.28□□□□□ -0.76
NEK9-205ENST00000555405 TMEM265A0A087WTH1 108 aa10.28□□□□□ -0.76
NEK9-205ENST00000555405 GFRA2O00451 464 aa10.28□□□□□ -0.76
NEK9-205ENST00000555405 RGS16O15492 202 aaPredicted RBP10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms