RNA–Protein interactions for RNA: ENST00000555221.3

CKS1BP1-201, Transcript of CDC28 protein kinase regulatory subunit 1B pseudogene 1, humanhuman

BASIC

Gene CKS1BP1, Length 240 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP1-201ENST00000555221 ARHGEF2Q92974 986 aaKnown RBP5.67□□□□□ -1.5
CKS1BP1-201ENST00000555221 GTF3C6Q969F1 213 aa5.67□□□□□ -1.5
CKS1BP1-201ENST00000555221 PERPQ96FX8 193 aa5.67□□□□□ -1.5
CKS1BP1-201ENST00000555221 ZC3HAV1LQ96H79 300 aaKnown RBP5.67□□□□□ -1.5
CKS1BP1-201ENST00000555221 ZFYVE19Q96K21 471 aa5.67□□□□□ -1.5
CKS1BP1-201ENST00000555221 CRAMP1Q96RY5 1269 aa5.67□□□□□ -1.5
CKS1BP1-201ENST00000555221 SIN3AQ96ST3 1273 aa5.67□□□□□ -1.5
CKS1BP1-201ENST00000555221 TRMOQ9BU70 441 aa5.67□□□□□ -1.5
CKS1BP1-201ENST00000555221 NUF2Q9BZD4 464 aa5.67□□□□□ -1.5
CKS1BP1-201ENST00000555221 GHITMQ9H3K2 345 aa5.67□□□□□ -1.5
CKS1BP1-201ENST00000555221 SEPT11Q9NVA2 429 aaKnown RBP5.67□□□□□ -1.5
CKS1BP1-201ENST00000555221 C11orf21Q9P2W6 132 aa5.67□□□□□ -1.5
CKS1BP1-201ENST00000555221 CTNNAL1Q9UBT7 734 aa5.67□□□□□ -1.5
CKS1BP1-201ENST00000555221 VPS28Q9UK41 221 aa5.67□□□□□ -1.5
CKS1BP1-201ENST00000555221 MKLN1Q9UL63 735 aa5.67□□□□□ -1.5
CKS1BP1-201ENST00000555221 ZSCAN21Q9Y5A6 473 aaPredicted RBP5.67□□□□□ -1.5
CKS1BP1-201ENST00000555221 CAPN7Q9Y6W3 813 aa5.67□□□□□ -1.5
CKS1BP1-201ENST00000555221 UTYO14607 1347 aa5.67□□□□□ -1.5
CKS1BP1-201ENST00000555221 FAM237BA0A1B0GVD1 139 aa5.66□□□□□ -1.5
CKS1BP1-201ENST00000555221 A6NCN8 305 aa5.66□□□□□ -1.5
CKS1BP1-201ENST00000555221 A6NNC1 897 aa5.66□□□□□ -1.5
CKS1BP1-201ENST00000555221 MDM4O15151 490 aa5.66□□□□□ -1.5
CKS1BP1-201ENST00000555221 HNRNPCL1O60812 293 aaKnown RBP5.66□□□□□ -1.5
CKS1BP1-201ENST00000555221 PAGE4O60829 102 aa5.66□□□□□ -1.5
CKS1BP1-201ENST00000555221 ZC3H11AO75152 810 aaKnown RBP eCLIP5.66□□□□□ -1.5
CKS1BP1-201ENST00000555221 MAPK4P31152 587 aa5.66□□□□□ -1.5
CKS1BP1-201ENST00000555221 CDAP32320 146 aa5.66□□□□□ -1.5
CKS1BP1-201ENST00000555221 HOXD13P35453 343 aa5.66□□□□□ -1.5
CKS1BP1-201ENST00000555221 PPARGP37231 505 aaPredicted RBP5.66□□□□□ -1.5
CKS1BP1-201ENST00000555221 PBX3P40426 434 aa5.66□□□□□ -1.5
CKS1BP1-201ENST00000555221 PRAMEP78395 509 aa5.66□□□□□ -1.5
CKS1BP1-201ENST00000555221 MTX1Q13505 466 aa5.66□□□□□ -1.5
CKS1BP1-201ENST00000555221 MED22Q15528 200 aa5.66□□□□□ -1.5
CKS1BP1-201ENST00000555221 Q4G0T1 1027 aa5.66□□□□□ -1.5
CKS1BP1-201ENST00000555221 ZKSCAN2Q63HK3 967 aa5.66□□□□□ -1.5
CKS1BP1-201ENST00000555221 SYCE2Q6PIF2 218 aa5.66□□□□□ -1.5
CKS1BP1-201ENST00000555221 SARM1Q6SZW1 724 aa5.66□□□□□ -1.5
CKS1BP1-201ENST00000555221 DENND6AQ8IWF6 608 aa5.66□□□□□ -1.5
CKS1BP1-201ENST00000555221 SUGP2Q8IX01 1082 aaKnown RBP eCLIP5.66□□□□□ -1.5
CKS1BP1-201ENST00000555221 DNAJC10Q8IXB1 793 aa5.66□□□□□ -1.5
CKS1BP1-201ENST00000555221 TTC39CQ8N584 583 aa5.66□□□□□ -1.5
CKS1BP1-201ENST00000555221 SCFD2Q8WU76 684 aa5.66□□□□□ -1.5
CKS1BP1-201ENST00000555221 TMEM174Q8WUU8 243 aa5.66□□□□□ -1.5
CKS1BP1-201ENST00000555221 COQ8BQ96D53 544 aa5.66□□□□□ -1.5
CKS1BP1-201ENST00000555221 YME1L1Q96TA2 773 aa5.66□□□□□ -1.5
CKS1BP1-201ENST00000555221 CCDC68Q9H2F9 335 aa5.66□□□□□ -1.5
CKS1BP1-201ENST00000555221 PLEKHA4Q9H4M7 779 aa5.66□□□□□ -1.5
CKS1BP1-201ENST00000555221 KLHL31Q9H511 634 aa5.66□□□□□ -1.5
CKS1BP1-201ENST00000555221 FBRSL1Q9HCM7 1045 aaKnown RBP5.66□□□□□ -1.5
CKS1BP1-201ENST00000555221 ASAH2Q9NR71 780 aa5.66□□□□□ -1.5
CKS1BP1-201ENST00000555221 DECR2Q9NUI1 292 aa5.66□□□□□ -1.5
CKS1BP1-201ENST00000555221 NDRG3Q9UGV2 375 aa5.66□□□□□ -1.5
CKS1BP1-201ENST00000555221 CORO1CQ9ULV4 474 aaPredicted RBP5.66□□□□□ -1.5
CKS1BP1-201ENST00000555221 RABGAP1Q9Y3P9 1069 aa5.66□□□□□ -1.5
CKS1BP1-201ENST00000555221 DYTNA2CJ06 578 aa5.65□□□□□ -1.5
CKS1BP1-201ENST00000555221 CGB1A6NKQ9 187 aa5.65□□□□□ -1.5
CKS1BP1-201ENST00000555221 ZNF814B7Z6K7 855 aa5.65□□□□□ -1.5
CKS1BP1-201ENST00000555221 KLRF2D3W0D1 207 aa5.65□□□□□ -1.5
CKS1BP1-201ENST00000555221 STMND1H3BQB6 276 aa5.65□□□□□ -1.5
CKS1BP1-201ENST00000555221 BCAT2O15382 392 aaPredicted RBP5.65□□□□□ -1.5
CKS1BP1-201ENST00000555221 ATP2C2O75185 946 aa5.65□□□□□ -1.5
CKS1BP1-201ENST00000555221 MTA2O94776 668 aa5.65□□□□□ -1.5
CKS1BP1-201ENST00000555221 IFNA2P01563 188 aa5.65□□□□□ -1.5
CKS1BP1-201ENST00000555221 CHRNB1P11230 501 aa5.65□□□□□ -1.5
CKS1BP1-201ENST00000555221 CYP19A1P11511 503 aaPredicted RBP5.65□□□□□ -1.5
CKS1BP1-201ENST00000555221 SRD5A1P18405 259 aa5.65□□□□□ -1.5
CKS1BP1-201ENST00000555221 EDN2P20800 178 aa5.65□□□□□ -1.5
CKS1BP1-201ENST00000555221 AVPR1AP37288 418 aa5.65□□□□□ -1.5
CKS1BP1-201ENST00000555221 ALDH7A1P49419 539 aaKnown RBP5.65□□□□□ -1.5
CKS1BP1-201ENST00000555221 CSTF3Q12996 717 aaKnown RBP5.65□□□□□ -1.5
CKS1BP1-201ENST00000555221 CRYMQ14894 314 aa5.65□□□□□ -1.5
CKS1BP1-201ENST00000555221 ASPHD1Q5U4P2 390 aa5.65□□□□□ -1.5
CKS1BP1-201ENST00000555221 CES5AQ6NT32 575 aa5.65□□□□□ -1.5
CKS1BP1-201ENST00000555221 TTI2Q6NXR4 508 aa5.65□□□□□ -1.5
CKS1BP1-201ENST00000555221 TMEM154Q6P9G4 183 aa5.65□□□□□ -1.5
CKS1BP1-201ENST00000555221 CYP20A1Q6UW02 462 aa5.65□□□□□ -1.5
CKS1BP1-201ENST00000555221 TRAPPC11Q7Z392 1133 aa5.65□□□□□ -1.5
CKS1BP1-201ENST00000555221 ARHGAP12Q8IWW6 846 aa5.65□□□□□ -1.5
CKS1BP1-201ENST00000555221 GJC3Q8NFK1 279 aa5.65□□□□□ -1.5
CKS1BP1-201ENST00000555221 C16orf52Q8NHV5 167 aa5.65□□□□□ -1.5
CKS1BP1-201ENST00000555221 CEP76Q8TAP6 659 aa5.65□□□□□ -1.5
CKS1BP1-201ENST00000555221 PSPC1Q8WXF1 523 aaKnown RBP5.65□□□□□ -1.5
CKS1BP1-201ENST00000555221 MSI2Q96DH6 328 aaKnown RBP5.65□□□□□ -1.5
CKS1BP1-201ENST00000555221 NUDT16L1Q9BRJ7 211 aaKnown RBP5.65□□□□□ -1.5
CKS1BP1-201ENST00000555221 GLIS2Q9BZE0 524 aaPredicted RBP5.65□□□□□ -1.5
CKS1BP1-201ENST00000555221 LHPPQ9H008 270 aa5.65□□□□□ -1.5
CKS1BP1-201ENST00000555221 SLITRK6Q9H5Y7 841 aa5.65□□□□□ -1.5
CKS1BP1-201ENST00000555221 MVB12BQ9H7P6 319 aa5.65□□□□□ -1.5
CKS1BP1-201ENST00000555221 MAP6D1Q9H9H5 199 aa5.65□□□□□ -1.5
CKS1BP1-201ENST00000555221 SCPEP1Q9HB40 452 aa5.65□□□□□ -1.5
CKS1BP1-201ENST00000555221 FZD3Q9NPG1 666 aa5.65□□□□□ -1.5
CKS1BP1-201ENST00000555221 ANKRD10Q9NXR5 420 aa5.65□□□□□ -1.5
CKS1BP1-201ENST00000555221 DLGAP2Q9P1A6 1054 aa5.65□□□□□ -1.5
CKS1BP1-201ENST00000555221 PCDHA12Q9UN75 941 aa5.65□□□□□ -1.5
CKS1BP1-201ENST00000555221 COG5Q9UP83 839 aa5.65□□□□□ -1.5
CKS1BP1-201ENST00000555221 SLC45A1Q9Y2W3 748 aa5.65□□□□□ -1.5
CKS1BP1-201ENST00000555221 AAR2Q9Y312 384 aaKnown RBP5.65□□□□□ -1.5
CKS1BP1-201ENST00000555221 A0A1W2PPC1 479 aa5.64□□□□□ -1.51
CKS1BP1-201ENST00000555221 HSPB2A8KAH6 182 aa5.64□□□□□ -1.51
CKS1BP1-201ENST00000555221 MYO1GB0I1T2 1018 aa5.64□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms