RNA–Protein interactions for RNA: ENST00000554384.1

CHD8-207, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 3

Gene CHD8, Length 735 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-207ENST00000554384 ZBED4O75132 1171 aa5.4□□□□□ -1.54
CHD8-207ENST00000554384 ATP2C2O75185 946 aa5.4□□□□□ -1.54
CHD8-207ENST00000554384 RARGP13631 454 aa5.4□□□□□ -1.54
CHD8-207ENST00000554384 RYKP34925 604 aa5.4□□□□□ -1.54
CHD8-207ENST00000554384 ABCG1P45844 678 aa5.4□□□□□ -1.54
CHD8-207ENST00000554384 PPP3CCP48454 512 aa5.4□□□□□ -1.54
CHD8-207ENST00000554384 GNAQP50148 359 aa5.4□□□□□ -1.54
CHD8-207ENST00000554384 EIF3BP55884 814 aaKnown RBP5.4□□□□□ -1.54
CHD8-207ENST00000554384 RNPS1Q15287 305 aaKnown RBP5.4□□□□□ -1.54
CHD8-207ENST00000554384 HSPB2Q16082 182 aa5.4□□□□□ -1.54
CHD8-207ENST00000554384 ALG11Q2TAA5 492 aa5.4□□□□□ -1.54
CHD8-207ENST00000554384 COL28A1Q2UY09 1125 aa5.4□□□□□ -1.54
CHD8-207ENST00000554384 C10orf25Q5T742 122 aa5.4□□□□□ -1.54
CHD8-207ENST00000554384 TXNDC8Q6A555 127 aa5.4□□□□□ -1.54
CHD8-207ENST00000554384 SHC4Q6S5L8 630 aa5.4□□□□□ -1.54
CHD8-207ENST00000554384 DEF8Q6ZN54 512 aa5.4□□□□□ -1.54
CHD8-207ENST00000554384 ZNF548Q8NEK5 533 aaPredicted RBP5.4□□□□□ -1.54
CHD8-207ENST00000554384 CREB3L4Q8TEY5 395 aa5.4□□□□□ -1.54
CHD8-207ENST00000554384 TMEM170AQ8WVE7 144 aa5.4□□□□□ -1.54
CHD8-207ENST00000554384 USP6NLQ92738 828 aa5.4□□□□□ -1.54
CHD8-207ENST00000554384 INTS12Q96CB8 462 aaKnown RBP5.4□□□□□ -1.54
CHD8-207ENST00000554384 BBS4Q96RK4 519 aa5.4□□□□□ -1.54
CHD8-207ENST00000554384 TKTL2Q9H0I9 626 aa5.4□□□□□ -1.54
CHD8-207ENST00000554384 TRNAU1APQ9NX07 287 aaKnown RBP5.4□□□□□ -1.54
CHD8-207ENST00000554384 SEL1LQ9UBV2 794 aa5.4□□□□□ -1.54
CHD8-207ENST00000554384 A4GNTQ9UNA3 340 aa5.4□□□□□ -1.54
CHD8-207ENST00000554384 LSM4Q9Y4Z0 139 aaKnown RBP5.4□□□□□ -1.54
CHD8-207ENST00000554384 KCNE2Q9Y6J6 123 aa5.4□□□□□ -1.54
CHD8-207ENST00000554384 PRG4Q92954 1404 aaPredicted RBP5.4□□□□□ -1.55
CHD8-207ENST00000554384 C11orf97A0A1B0GVM6 126 aaPredicted RBP5.39□□□□□ -1.55
CHD8-207ENST00000554384 TYW5A2RUC4 315 aaKnown RBP5.39□□□□□ -1.55
CHD8-207ENST00000554384 KLRF2D3W0D1 207 aa5.39□□□□□ -1.55
CHD8-207ENST00000554384 NPIPB11E5RHQ5 1161 aa5.39□□□□□ -1.55
CHD8-207ENST00000554384 CNOT3O75175 753 aaKnown RBP5.39□□□□□ -1.55
CHD8-207ENST00000554384 TIPRLO75663 272 aa5.39□□□□□ -1.55
CHD8-207ENST00000554384 NDUFB8O95169 186 aa5.39□□□□□ -1.55
CHD8-207ENST00000554384 LAMP2P13473 410 aa5.39□□□□□ -1.55
CHD8-207ENST00000554384 SRD5A1P18405 259 aa5.39□□□□□ -1.55
CHD8-207ENST00000554384 ITGAXP20702 1163 aa5.39□□□□□ -1.55
CHD8-207ENST00000554384 NFKBIAP25963 317 aa5.39□□□□□ -1.55
CHD8-207ENST00000554384 MLH1P40692 756 aa5.39□□□□□ -1.55
CHD8-207ENST00000554384 HADHAP40939 763 aa5.39□□□□□ -1.55
CHD8-207ENST00000554384 CENPAP49450 140 aa5.39□□□□□ -1.55
CHD8-207ENST00000554384 RARSP54136 660 aaKnown RBP5.39□□□□□ -1.55
CHD8-207ENST00000554384 DRG2P55039 364 aaKnown RBP5.39□□□□□ -1.55
CHD8-207ENST00000554384 YWHAZP63104 245 aaKnown RBP5.39□□□□□ -1.55
CHD8-207ENST00000554384 KLF9Q13886 244 aaPredicted RBP5.39□□□□□ -1.55
CHD8-207ENST00000554384 FRG1Q14331 258 aaKnown RBP5.39□□□□□ -1.55
CHD8-207ENST00000554384 INPP5JQ15735 1006 aaPredicted RBP5.39□□□□□ -1.55
CHD8-207ENST00000554384 IKBIPQ70UQ0 350 aa5.39□□□□□ -1.55
CHD8-207ENST00000554384 PIP4P1Q86T03 277 aa5.39□□□□□ -1.55
CHD8-207ENST00000554384 TBC1D26Q86UD7 250 aa5.39□□□□□ -1.55
CHD8-207ENST00000554384 GPT2Q8TD30 523 aa5.39□□□□□ -1.55
CHD8-207ENST00000554384 NOC3LQ8WTT2 800 aaKnown RBP5.39□□□□□ -1.55
CHD8-207ENST00000554384 INPP5DQ92835 1189 aa5.39□□□□□ -1.55
CHD8-207ENST00000554384 COQ8BQ96D53 544 aa5.39□□□□□ -1.55
CHD8-207ENST00000554384 WDR77Q9BQA1 342 aaPredicted RBP5.39□□□□□ -1.55
CHD8-207ENST00000554384 FTOQ9C0B1 505 aaKnown RBP eCLIP5.39□□□□□ -1.55
CHD8-207ENST00000554384 GHITMQ9H3K2 345 aa5.39□□□□□ -1.55
CHD8-207ENST00000554384 WDR26Q9H7D7 661 aa5.39□□□□□ -1.55
CHD8-207ENST00000554384 DIAPH3Q9NSV4 1193 aa5.39□□□□□ -1.55
CHD8-207ENST00000554384 PCDHA12Q9UN75 941 aa5.39□□□□□ -1.55
CHD8-207ENST00000554384 ZNF335Q9H4Z2 1342 aaPredicted RBP5.39□□□□□ -1.55
CHD8-207ENST00000554384 ZMYM2Q9UBW7 1377 aa5.39□□□□□ -1.55
CHD8-207ENST00000554384 TOP2BQ02880 1626 aa5.38□□□□□ -1.55
CHD8-207ENST00000554384 C17orf102A2RUQ5 167 aa5.38□□□□□ -1.55
CHD8-207ENST00000554384 WDR91A4D1P6 747 aa5.38□□□□□ -1.55
CHD8-207ENST00000554384 PRF1P14222 555 aa5.38□□□□□ -1.55
CHD8-207ENST00000554384 RPL7AP62424 266 aaKnown RBP5.38□□□□□ -1.55
CHD8-207ENST00000554384 OLR1P78380 273 aa5.38□□□□□ -1.55
CHD8-207ENST00000554384 EIF4A2Q14240 407 aaKnown RBP5.38□□□□□ -1.55
CHD8-207ENST00000554384 RABEP1Q15276 862 aa5.38□□□□□ -1.55
CHD8-207ENST00000554384 TOMM20Q15388 145 aa5.38□□□□□ -1.55
CHD8-207ENST00000554384 RBMS2Q15434 407 aaKnown RBP5.38□□□□□ -1.55
CHD8-207ENST00000554384 EPHA10Q5JZY3 1008 aa5.38□□□□□ -1.55
CHD8-207ENST00000554384 PRAMEF19Q5SWL8 479 aa5.38□□□□□ -1.55
CHD8-207ENST00000554384 ATG9BQ674R7 924 aa5.38□□□□□ -1.55
CHD8-207ENST00000554384 FBXO46Q6PJ61 603 aaPredicted RBP5.38□□□□□ -1.55
CHD8-207ENST00000554384 SLC16A12Q6ZSM3 486 aa5.38□□□□□ -1.55
CHD8-207ENST00000554384 SRRM1Q8IYB3 904 aaKnown RBP5.38□□□□□ -1.55
CHD8-207ENST00000554384 ADSSL1Q8N142 457 aa5.38□□□□□ -1.55
CHD8-207ENST00000554384 WDTC1Q8N5D0 677 aa5.38□□□□□ -1.55
CHD8-207ENST00000554384 NANOGP1Q8N7R0 232 aa5.38□□□□□ -1.55
CHD8-207ENST00000554384 PDILTQ8N807 584 aa5.38□□□□□ -1.55
CHD8-207ENST00000554384 TMEM116Q8NCL8 245 aa5.38□□□□□ -1.55
CHD8-207ENST00000554384 ENGASEQ8NFI3 743 aa5.38□□□□□ -1.55
CHD8-207ENST00000554384 GJC3Q8NFK1 279 aa5.38□□□□□ -1.55
CHD8-207ENST00000554384 CENPOQ9BU64 300 aa5.38□□□□□ -1.55
CHD8-207ENST00000554384 NPFFR1Q9GZQ6 430 aa5.38□□□□□ -1.55
CHD8-207ENST00000554384 NRIP3Q9NQ35 241 aa5.38□□□□□ -1.55
CHD8-207ENST00000554384 EIF2B3Q9NR50 452 aaKnown RBP5.38□□□□□ -1.55
CHD8-207ENST00000554384 TBC1D29Q9UFV1 150 aa5.38□□□□□ -1.55
CHD8-207ENST00000554384 LIMA1Q9UHB6 759 aaKnown RBP5.38□□□□□ -1.55
CHD8-207ENST00000554384 DDX52Q9Y2R4 599 aaKnown RBP eCLIP5.38□□□□□ -1.55
CHD8-207ENST00000554384 ADAM18Q9Y3Q7 739 aa5.38□□□□□ -1.55
CHD8-207ENST00000554384 SCINQ9Y6U3 715 aa5.38□□□□□ -1.55
CHD8-207ENST00000554384 A0A096LPK6 155 aa5.37□□□□□ -1.55
CHD8-207ENST00000554384 A0A1W2PQF6 199 aa5.37□□□□□ -1.55
CHD8-207ENST00000554384 EBAG9O00559 213 aa5.37□□□□□ -1.55
CHD8-207ENST00000554384 AP3D1O14617 1153 aa5.37□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms