RNA–Protein interactions for RNA: ENST00000553855.5

PSEN1-209, Transcript of presenilin 1, humanhuman

TSL 1 (best)

Gene PSEN1, Length 1,254 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-209ENST00000553855 VAV1P15498 845 aa8.47□□□□□ -1.05
PSEN1-209ENST00000553855 GLDCP23378 1020 aa8.47□□□□□ -1.05
PSEN1-209ENST00000553855 ITPKAP23677 461 aa8.47□□□□□ -1.05
PSEN1-209ENST00000553855 IL1R2P27930 398 aa8.47□□□□□ -1.05
PSEN1-209ENST00000553855 NUDT1P36639 197 aa8.47□□□□□ -1.05
PSEN1-209ENST00000553855 CETN2P41208 172 aa8.47□□□□□ -1.05
PSEN1-209ENST00000553855 PTGER3P43115 390 aa8.47□□□□□ -1.05
PSEN1-209ENST00000553855 PAPOLAP51003 745 aaKnown RBP8.47□□□□□ -1.05
PSEN1-209ENST00000553855 RENBPP51606 427 aa8.47□□□□□ -1.05
PSEN1-209ENST00000553855 CCNHP51946 323 aaPredicted RBP8.47□□□□□ -1.05
PSEN1-209ENST00000553855 ARF5P84085 180 aa8.47□□□□□ -1.05
PSEN1-209ENST00000553855 RFTN1Q14699 578 aaPredicted RBP8.47□□□□□ -1.05
PSEN1-209ENST00000553855 GRM3Q14832 879 aa8.47□□□□□ -1.05
PSEN1-209ENST00000553855 LARP7Q4G0J3 582 aaKnown RBP eCLIP8.47□□□□□ -1.05
PSEN1-209ENST00000553855 TRIM61Q5EBN2 209 aa8.47□□□□□ -1.05
PSEN1-209ENST00000553855 DCAF12L1Q5VU92 463 aa8.47□□□□□ -1.05
PSEN1-209ENST00000553855 DAB2IPQ5VWQ8 1189 aa8.47□□□□□ -1.05
PSEN1-209ENST00000553855 TBC1D3GQ6DHY5 549 aa8.47□□□□□ -1.05
PSEN1-209ENST00000553855 TBC1D3CQ6IPX1 549 aa8.47□□□□□ -1.05
PSEN1-209ENST00000553855 FBXL19Q6PCT2 694 aa8.47□□□□□ -1.05
PSEN1-209ENST00000553855 PRICKLE2Q7Z3G6 844 aa8.47□□□□□ -1.05
PSEN1-209ENST00000553855 ZNF438Q7Z4V0 828 aa8.47□□□□□ -1.05
PSEN1-209ENST00000553855 POLNQ7Z5Q5 900 aa8.47□□□□□ -1.05
PSEN1-209ENST00000553855 PRPF39Q86UA1 669 aaKnown RBP8.47□□□□□ -1.05
PSEN1-209ENST00000553855 LRRC49Q8IUZ0 686 aa8.47□□□□□ -1.05
PSEN1-209ENST00000553855 RHOT1Q8IXI2 618 aa8.47□□□□□ -1.05
PSEN1-209ENST00000553855 TBC1D3Q8IZP1 549 aaPredicted RBP8.47□□□□□ -1.05
PSEN1-209ENST00000553855 ATPAF2Q8N5M1 289 aa8.47□□□□□ -1.05
PSEN1-209ENST00000553855 ARFGAP1Q8N6T3 406 aa8.47□□□□□ -1.05
PSEN1-209ENST00000553855 OR2AP1Q8NGE2 309 aa8.47□□□□□ -1.05
PSEN1-209ENST00000553855 OR2A12Q8NGT7 310 aa8.47□□□□□ -1.05
PSEN1-209ENST00000553855 RNF217Q8TC41 542 aa8.47□□□□□ -1.05
PSEN1-209ENST00000553855 GRIN3AQ8TCU5 1115 aa8.47□□□□□ -1.05
PSEN1-209ENST00000553855 NETO1Q8TDF5 533 aa8.47□□□□□ -1.05
PSEN1-209ENST00000553855 ZNF670Q9BS34 389 aa8.47□□□□□ -1.05
PSEN1-209ENST00000553855 OSBPL1AQ9BXW6 950 aa8.47□□□□□ -1.05
PSEN1-209ENST00000553855 NEUROG2Q9H2A3 272 aa8.47□□□□□ -1.05
PSEN1-209ENST00000553855 PCDH18Q9HCL0 1135 aa8.47□□□□□ -1.05
PSEN1-209ENST00000553855 NDFIP2Q9NV92 336 aa8.47□□□□□ -1.05
PSEN1-209ENST00000553855 HECAQ9UBI9 543 aaPredicted RBP8.47□□□□□ -1.05
PSEN1-209ENST00000553855 ZNF212Q9UDV6 495 aa8.47□□□□□ -1.05
PSEN1-209ENST00000553855 IPO11Q9UI26 975 aaKnown RBP8.47□□□□□ -1.05
PSEN1-209ENST00000553855 A0A0A6YYK5 440 aaPredicted RBP8.46□□□□□ -1.06
PSEN1-209ENST00000553855 A0A1B0GTW7 788 aa8.46□□□□□ -1.06
PSEN1-209ENST00000553855 LOC105378220A0A1B0GUY1 285 aaPredicted RBP8.46□□□□□ -1.06
PSEN1-209ENST00000553855 LRRD1A4D1F6 860 aa8.46□□□□□ -1.06
PSEN1-209ENST00000553855 GOLGA6L3A6NEY3 463 aa8.46□□□□□ -1.06
PSEN1-209ENST00000553855 METTL12A8MUP2 240 aa8.46□□□□□ -1.06
PSEN1-209ENST00000553855 GIPC1O14908 333 aa8.46□□□□□ -1.06
PSEN1-209ENST00000553855 PRAMEF11O60813 436 aa8.46□□□□□ -1.06
PSEN1-209ENST00000553855 LEFTY1O75610 366 aa8.46□□□□□ -1.06
PSEN1-209ENST00000553855 MTA2O94776 668 aa8.46□□□□□ -1.06
PSEN1-209ENST00000553855 TMCC1O94876 653 aa8.46□□□□□ -1.06
PSEN1-209ENST00000553855 KRT1P04264 644 aa8.46□□□□□ -1.06
PSEN1-209ENST00000553855 ZFXP17010 805 aaPredicted RBP8.46□□□□□ -1.06
PSEN1-209ENST00000553855 MX2P20592 715 aa8.46□□□□□ -1.06
PSEN1-209ENST00000553855 AMPD1P23109 780 aa8.46□□□□□ -1.06
PSEN1-209ENST00000553855 NFKBIAP25963 317 aa8.46□□□□□ -1.06
PSEN1-209ENST00000553855 ACSL1P33121 698 aa8.46□□□□□ -1.06
PSEN1-209ENST00000553855 NEK3P51956 506 aa8.46□□□□□ -1.06
PSEN1-209ENST00000553855 SLC25A11Q02978 314 aaKnown RBP8.46□□□□□ -1.06
PSEN1-209ENST00000553855 IL10RBQ08334 325 aa8.46□□□□□ -1.06
PSEN1-209ENST00000553855 KIF5AQ12840 1032 aa8.46□□□□□ -1.06
PSEN1-209ENST00000553855 ZNF235Q14590 738 aa8.46□□□□□ -1.06
PSEN1-209ENST00000553855 CCDC6Q16204 474 aa8.46□□□□□ -1.06
PSEN1-209ENST00000553855 MYLK3Q32MK0 819 aa8.46□□□□□ -1.06
PSEN1-209ENST00000553855 POM121L1PQ3SYA9 428 aa8.46□□□□□ -1.06
PSEN1-209ENST00000553855 KIAA0895LQ68EN5 471 aa8.46□□□□□ -1.06
PSEN1-209ENST00000553855 TIGD7Q6NT04 549 aaPredicted RBP8.46□□□□□ -1.06
PSEN1-209ENST00000553855 LEKR1Q6ZMV7 388 aa8.46□□□□□ -1.06
PSEN1-209ENST00000553855 DPY19L3Q6ZPD9 716 aa8.46□□□□□ -1.06
PSEN1-209ENST00000553855 ERN2Q76MJ5 926 aaKnown RBP8.46□□□□□ -1.06
PSEN1-209ENST00000553855 BZW1Q7L1Q6 419 aaKnown RBP8.46□□□□□ -1.06
PSEN1-209ENST00000553855 LYSMD3Q7Z3D4 306 aa8.46□□□□□ -1.06
PSEN1-209ENST00000553855 DAAM2Q86T65 1068 aa8.46□□□□□ -1.06
PSEN1-209ENST00000553855 CCDC74AQ96AQ1 378 aa8.46□□□□□ -1.06
PSEN1-209ENST00000553855 ZNF599Q96NL3 588 aa8.46□□□□□ -1.06
PSEN1-209ENST00000553855 CSPG4P5Q96PW8 444 aa8.46□□□□□ -1.06
PSEN1-209ENST00000553855 EDEM2Q9BV94 578 aa8.46□□□□□ -1.06
PSEN1-209ENST00000553855 GTPBP2Q9BX10 602 aaKnown RBP8.46□□□□□ -1.06
PSEN1-209ENST00000553855 ZDHHC5Q9C0B5 715 aa8.46□□□□□ -1.06
PSEN1-209ENST00000553855 SLC39A8Q9C0K1 460 aa8.46□□□□□ -1.06
PSEN1-209ENST00000553855 C12orf49Q9H741 205 aa8.46□□□□□ -1.06
PSEN1-209ENST00000553855 LRRC19Q9H756 370 aa8.46□□□□□ -1.06
PSEN1-209ENST00000553855 EVLQ9UI08 416 aaPredicted RBP8.46□□□□□ -1.06
PSEN1-209ENST00000553855 PPM1HQ9ULR3 514 aa8.46□□□□□ -1.06
PSEN1-209ENST00000553855 NEU3Q9UQ49 428 aa8.46□□□□□ -1.06
PSEN1-209ENST00000553855 KCNMB2Q9Y691 235 aa8.46□□□□□ -1.06
PSEN1-209ENST00000553855 DYNC1LI1Q9Y6G9 523 aaKnown RBP8.46□□□□□ -1.06
PSEN1-209ENST00000553855 ATXN2Q99700 1313 aaKnown RBP8.46□□□□□ -1.06
PSEN1-209ENST00000553855 ZFHX2Q9C0A1 2572 aaPredicted RBP8.45□□□□□ -1.06
PSEN1-209ENST00000553855 BCAT2O15382 392 aaPredicted RBP8.45□□□□□ -1.06
PSEN1-209ENST00000553855 PCDH8O95206 1070 aa8.45□□□□□ -1.06
PSEN1-209ENST00000553855 LCA5LO95447 670 aa8.45□□□□□ -1.06
PSEN1-209ENST00000553855 PTMAP06454 111 aaKnown RBP8.45□□□□□ -1.06
PSEN1-209ENST00000553855 SERPINF2P08697 491 aa8.45□□□□□ -1.06
PSEN1-209ENST00000553855 BMP2P12643 396 aa8.45□□□□□ -1.06
PSEN1-209ENST00000553855 ITGB7P26010 798 aa8.45□□□□□ -1.06
PSEN1-209ENST00000553855 CD27P26842 260 aa8.45□□□□□ -1.06
PSEN1-209ENST00000553855 HSPA9P38646 679 aaKnown RBP8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms