RNA–Protein interactions for RNA: ENST00000553544.1

SRP54-203, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 491 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-203ENST00000553544 TDRD6O60522 2096 aaKnown RBP12.02□□□□□ -0.49
SRP54-203ENST00000553544 AHCTF1Q8WYP5 2266 aa12.01□□□□□ -0.49
SRP54-203ENST00000553544 CCDC187A0A096LP49 1063 aa12.01□□□□□ -0.49
SRP54-203ENST00000553544 A0A1W2PQC6 194 aa12.01□□□□□ -0.49
SRP54-203ENST00000553544 POM121BA6NF01 834 aa12.01□□□□□ -0.49
SRP54-203ENST00000553544 SIGLEC16A6NMB1 481 aa12.01□□□□□ -0.49
SRP54-203ENST00000553544 TMX2-CTNND1H3BSU7 103 aa12.01□□□□□ -0.49
SRP54-203ENST00000553544 TERTO14746 1132 aaKnown RBP12.01□□□□□ -0.49
SRP54-203ENST00000553544 MUSKO15146 869 aa12.01□□□□□ -0.49
SRP54-203ENST00000553544 MT-CO1P00395 513 aa12.01□□□□□ -0.49
SRP54-203ENST00000553544 NTRK1P04629 796 aa12.01□□□□□ -0.49
SRP54-203ENST00000553544 ITGB2P05107 769 aa12.01□□□□□ -0.49
SRP54-203ENST00000553544 CALB1P05937 261 aa12.01□□□□□ -0.49
SRP54-203ENST00000553544 CTSLP07711 333 aa12.01□□□□□ -0.49
SRP54-203ENST00000553544 RHOCP08134 193 aa12.01□□□□□ -0.49
SRP54-203ENST00000553544 ITGA2BP08514 1039 aa12.01□□□□□ -0.49
SRP54-203ENST00000553544 CCDC172P0C7W6 258 aa12.01□□□□□ -0.49
SRP54-203ENST00000553544 JUNDP17535 347 aa12.01□□□□□ -0.49
SRP54-203ENST00000553544 RABIFP47224 123 aa12.01□□□□□ -0.49
SRP54-203ENST00000553544 HDAC4P56524 1084 aa12.01□□□□□ -0.49
SRP54-203ENST00000553544 SGCGQ13326 291 aa12.01□□□□□ -0.49
SRP54-203ENST00000553544 NR1I3Q14994 352 aa12.01□□□□□ -0.49
SRP54-203ENST00000553544 CDO1Q16878 200 aa12.01□□□□□ -0.49
SRP54-203ENST00000553544 DEFB133Q30KQ1 61 aa12.01□□□□□ -0.49
SRP54-203ENST00000553544 LINC00303Q3SY05 128 aa12.01□□□□□ -0.49
SRP54-203ENST00000553544 TMEM259Q4ZIN3 620 aa12.01□□□□□ -0.49
SRP54-203ENST00000553544 ARSIQ5FYB1 569 aa12.01□□□□□ -0.49
SRP54-203ENST00000553544 PPP1R15BQ5SWA1 713 aa12.01□□□□□ -0.49
SRP54-203ENST00000553544 MANEALQ5VSG8 457 aa12.01□□□□□ -0.49
SRP54-203ENST00000553544 SEL1L3Q68CR1 1132 aa12.01□□□□□ -0.49
SRP54-203ENST00000553544 WDR59Q6PJI9 974 aa12.01□□□□□ -0.49
SRP54-203ENST00000553544 ZNF574Q6ZN55 896 aaPredicted RBP12.01□□□□□ -0.49
SRP54-203ENST00000553544 PARGQ86W56 976 aa12.01□□□□□ -0.49
SRP54-203ENST00000553544 LURAP1LQ8IV03 231 aa12.01□□□□□ -0.49
SRP54-203ENST00000553544 OR2A12Q8NGT7 310 aa12.01□□□□□ -0.49
SRP54-203ENST00000553544 LMX1AQ8TE12 382 aa12.01□□□□□ -0.49
SRP54-203ENST00000553544 SGF29Q96ES7 293 aa12.01□□□□□ -0.49
SRP54-203ENST00000553544 PPP1R16AQ96I34 528 aa12.01□□□□□ -0.49
SRP54-203ENST00000553544 TRIM4Q9C037 500 aa12.01□□□□□ -0.49
SRP54-203ENST00000553544 MUC3BQ9H195 1237 aa12.01□□□□□ -0.49
SRP54-203ENST00000553544 STARD5Q9NSY2 213 aa12.01□□□□□ -0.49
SRP54-203ENST00000553544 MPP6Q9NZW5 540 aa12.01□□□□□ -0.49
SRP54-203ENST00000553544 A0A0D9SEW6 157 aa12□□□□□ -0.49
SRP54-203ENST00000553544 ILVBLA1L0T0 632 aa12□□□□□ -0.49
SRP54-203ENST00000553544 FPGTO14772 594 aa12□□□□□ -0.49
SRP54-203ENST00000553544 SUV39H1O43463 412 aa12□□□□□ -0.49
SRP54-203ENST00000553544 SNAP91O60641 907 aa12□□□□□ -0.49
SRP54-203ENST00000553544 SRGAP2O75044 1071 aa12□□□□□ -0.49
SRP54-203ENST00000553544 ATXN8OSP0DMR3 200 aa12□□□□□ -0.49
SRP54-203ENST00000553544 SRCP12931 536 aa12□□□□□ -0.49
SRP54-203ENST00000553544 OR1E1P30953 314 aa12□□□□□ -0.49
SRP54-203ENST00000553544 RECQLP46063 649 aaPredicted RBP12□□□□□ -0.49
SRP54-203ENST00000553544 SPIDRQ14159 915 aa12□□□□□ -0.49
SRP54-203ENST00000553544 FILIP1LQ4L180 1135 aa12□□□□□ -0.49
SRP54-203ENST00000553544 ACAD10Q6JQN1 1059 aa12□□□□□ -0.49
SRP54-203ENST00000553544 KIAA1161Q6NSJ0 714 aa12□□□□□ -0.49
SRP54-203ENST00000553544 CRTC1Q6UUV9 634 aa12□□□□□ -0.49
SRP54-203ENST00000553544 KYAT3Q6YP21 454 aaKnown RBP12□□□□□ -0.49
SRP54-203ENST00000553544 ZNF783Q6ZMS7 281 aa12□□□□□ -0.49
SRP54-203ENST00000553544 TFAP2DQ7Z6R9 452 aa12□□□□□ -0.49
SRP54-203ENST00000553544 MCOLN2Q8IZK6 566 aa12□□□□□ -0.49
SRP54-203ENST00000553544 FBXO39Q8N4B4 442 aa12□□□□□ -0.49
SRP54-203ENST00000553544 DCAF4L2Q8NA75 395 aa12□□□□□ -0.49
SRP54-203ENST00000553544 NAT6Q93015 286 aa12□□□□□ -0.49
SRP54-203ENST00000553544 NTAN1Q96AB6 310 aa12□□□□□ -0.49
SRP54-203ENST00000553544 SEMA3CQ99985 751 aa12□□□□□ -0.49
SRP54-203ENST00000553544 C2orf49Q9BVC5 232 aaPredicted RBP12□□□□□ -0.49
SRP54-203ENST00000553544 SELENOOQ9BVL4 669 aa12□□□□□ -0.49
SRP54-203ENST00000553544 MAGEB5Q9BZ81 275 aa12□□□□□ -0.49
SRP54-203ENST00000553544 ZYG11BQ9C0D3 744 aa12□□□□□ -0.49
SRP54-203ENST00000553544 TTYH3Q9C0H2 523 aa12□□□□□ -0.49
SRP54-203ENST00000553544 RETREG1Q9H6L5 497 aa12□□□□□ -0.49
SRP54-203ENST00000553544 GPR27Q9NS67 375 aa12□□□□□ -0.49
SRP54-203ENST00000553544 AIPL1Q9NZN9 384 aa12□□□□□ -0.49
SRP54-203ENST00000553544 SPASTQ9UBP0 616 aa12□□□□□ -0.49
SRP54-203ENST00000553544 OR12D3Q9UGF7 316 aa12□□□□□ -0.49
SRP54-203ENST00000553544 IL36AQ9UHA7 158 aa12□□□□□ -0.49
SRP54-203ENST00000553544 VPS51Q9UID3 782 aa12□□□□□ -0.49
SRP54-203ENST00000553544 KLF15Q9UIH9 416 aa12□□□□□ -0.49
SRP54-203ENST00000553544 NEU3Q9UQ49 428 aa12□□□□□ -0.49
SRP54-203ENST00000553544 PCDHGA7Q9Y5G6 932 aa12□□□□□ -0.49
SRP54-203ENST00000553544 SYCE3A1L190 88 aa11.99□□□□□ -0.49
SRP54-203ENST00000553544 PMS2P1A4D2B8 440 aa11.99□□□□□ -0.49
SRP54-203ENST00000553544 LRRC53A6NM62 1247 aa11.99□□□□□ -0.49
SRP54-203ENST00000553544 FAM72CH0Y354 149 aa11.99□□□□□ -0.49
SRP54-203ENST00000553544 K7ERQ8 282 aa11.99□□□□□ -0.49
SRP54-203ENST00000553544 ZMPSTE24O75844 475 aa11.99□□□□□ -0.49
SRP54-203ENST00000553544 GPD1P21695 349 aa11.99□□□□□ -0.49
SRP54-203ENST00000553544 SLC5A2P31639 672 aa11.99□□□□□ -0.49
SRP54-203ENST00000553544 PRKCIP41743 596 aa11.99□□□□□ -0.49
SRP54-203ENST00000553544 ZNF143P52747 638 aaPredicted RBP11.99□□□□□ -0.49
SRP54-203ENST00000553544 ADKP55263 362 aaKnown RBP11.99□□□□□ -0.49
SRP54-203ENST00000553544 RPL7AP62424 266 aaKnown RBP11.99□□□□□ -0.49
SRP54-203ENST00000553544 EIF3IQ13347 325 aaKnown RBP11.99□□□□□ -0.49
SRP54-203ENST00000553544 PDE1CQ14123 709 aaPredicted RBP11.99□□□□□ -0.49
SRP54-203ENST00000553544 PERM1Q5SV97 790 aa11.99□□□□□ -0.49
SRP54-203ENST00000553544 FAM72AQ5TYM5 149 aa11.99□□□□□ -0.49
SRP54-203ENST00000553544 E4F1Q66K89 784 aaPredicted RBP11.99□□□□□ -0.49
SRP54-203ENST00000553544 FAM72DQ6L9T8 149 aa11.99□□□□□ -0.49
SRP54-203ENST00000553544 ESRP1Q6NXG1 681 aaKnown RBP11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms