RNA–Protein interactions for RNA: ENST00000553455.1

SYNE2-210, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 2 BASIC

Gene SYNE2, Length 674 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-210ENST00000553455 GPR12P47775 334 aa5.42□□□□□ -1.54
SYNE2-210ENST00000553455 GABRB2P47870 512 aa5.42□□□□□ -1.54
SYNE2-210ENST00000553455 GNAQP50148 359 aa5.42□□□□□ -1.54
SYNE2-210ENST00000553455 TMPRSS3P57727 454 aa5.42□□□□□ -1.54
SYNE2-210ENST00000553455 GRIK3Q13003 919 aa5.42□□□□□ -1.54
SYNE2-210ENST00000553455 Q4G0T1 1027 aa5.42□□□□□ -1.54
SYNE2-210ENST00000553455 SLC2A7Q6PXP3 512 aa5.42□□□□□ -1.54
SYNE2-210ENST00000553455 TDRPQ86YL5 185 aa5.42□□□□□ -1.54
SYNE2-210ENST00000553455 CCDC105Q8IYK2 499 aa5.42□□□□□ -1.54
SYNE2-210ENST00000553455 HORMAD2Q8N7B1 307 aa5.42□□□□□ -1.54
SYNE2-210ENST00000553455 PDILTQ8N807 584 aa5.42□□□□□ -1.54
SYNE2-210ENST00000553455 NEK9Q8TD19 979 aa5.42□□□□□ -1.54
SYNE2-210ENST00000553455 NTN5Q8WTR8 489 aaPredicted RBP5.42□□□□□ -1.54
SYNE2-210ENST00000553455 ARHGEF2Q92974 986 aaKnown RBP5.42□□□□□ -1.54
SYNE2-210ENST00000553455 GTF3C6Q969F1 213 aa5.42□□□□□ -1.54
SYNE2-210ENST00000553455 FAM149B1Q96BN6 582 aa5.42□□□□□ -1.54
SYNE2-210ENST00000553455 YME1L1Q96TA2 773 aa5.42□□□□□ -1.54
SYNE2-210ENST00000553455 TMPRSS5Q9H3S3 457 aa5.42□□□□□ -1.54
SYNE2-210ENST00000553455 SPATS2LQ9NUQ6 558 aaKnown RBP5.42□□□□□ -1.54
SYNE2-210ENST00000553455 CARD8Q9Y2G2 431 aa5.42□□□□□ -1.54
SYNE2-210ENST00000553455 RABGAP1Q9Y3P9 1069 aa5.42□□□□□ -1.54
SYNE2-210ENST00000553455 ZSCAN21Q9Y5A6 473 aaPredicted RBP5.42□□□□□ -1.54
SYNE2-210ENST00000553455 SLC4A4Q9Y6R1 1079 aa5.42□□□□□ -1.54
SYNE2-210ENST00000553455 RSF1Q96T23 1441 aaPredicted RBP5.41□□□□□ -1.54
SYNE2-210ENST00000553455 A0A0U1RQF3 1178 aa5.41□□□□□ -1.54
SYNE2-210ENST00000553455 LRRC53A6NM62 1247 aa5.41□□□□□ -1.54
SYNE2-210ENST00000553455 KLRF2D3W0D1 207 aa5.41□□□□□ -1.54
SYNE2-210ENST00000553455 KLK8O60259 260 aa5.41□□□□□ -1.54
SYNE2-210ENST00000553455 IRF1P10914 325 aa5.41□□□□□ -1.54
SYNE2-210ENST00000553455 RARGP13631 454 aa5.41□□□□□ -1.54
SYNE2-210ENST00000553455 CDH2P19022 906 aaPredicted RBP5.41□□□□□ -1.54
SYNE2-210ENST00000553455 CDAP32320 146 aa5.41□□□□□ -1.54
SYNE2-210ENST00000553455 DCTDP32321 178 aa5.41□□□□□ -1.54
SYNE2-210ENST00000553455 GARSP41250 739 aaKnown RBP5.41□□□□□ -1.54
SYNE2-210ENST00000553455 PIP4K2AP48426 406 aaPredicted RBP5.41□□□□□ -1.54
SYNE2-210ENST00000553455 NLRP5P59047 1200 aa5.41□□□□□ -1.54
SYNE2-210ENST00000553455 CREB5Q02930 508 aa5.41□□□□□ -1.54
SYNE2-210ENST00000553455 GAD2Q05329 585 aa5.41□□□□□ -1.54
SYNE2-210ENST00000553455 MTX1Q13505 466 aa5.41□□□□□ -1.54
SYNE2-210ENST00000553455 CUL4AQ13619 759 aa5.41□□□□□ -1.54
SYNE2-210ENST00000553455 FGFBP1Q14512 234 aa5.41□□□□□ -1.54
SYNE2-210ENST00000553455 PPP2R5BQ15173 497 aa5.41□□□□□ -1.54
SYNE2-210ENST00000553455 HIST2H2ACQ16777 129 aaPredicted RBP5.41□□□□□ -1.54
SYNE2-210ENST00000553455 DPCR1Q3MIW9 517 aa5.41□□□□□ -1.54
SYNE2-210ENST00000553455 NOXA1Q86UR1 476 aa5.41□□□□□ -1.54
SYNE2-210ENST00000553455 ANKRD13BQ86YJ7 626 aa5.41□□□□□ -1.54
SYNE2-210ENST00000553455 LURAP1LQ8IV03 231 aa5.41□□□□□ -1.54
SYNE2-210ENST00000553455 RNF183Q96D59 192 aa5.41□□□□□ -1.54
SYNE2-210ENST00000553455 ZG16BQ96DA0 208 aa5.41□□□□□ -1.54
SYNE2-210ENST00000553455 MMABQ96EY8 250 aaPredicted RBP5.41□□□□□ -1.54
SYNE2-210ENST00000553455 BBS4Q96RK4 519 aa5.41□□□□□ -1.54
SYNE2-210ENST00000553455 TKTL2Q9H0I9 626 aa5.41□□□□□ -1.54
SYNE2-210ENST00000553455 KLHL31Q9H511 634 aa5.41□□□□□ -1.54
SYNE2-210ENST00000553455 SYNCQ9H7C4 482 aa5.41□□□□□ -1.54
SYNE2-210ENST00000553455 FBRSL1Q9HCM7 1045 aaKnown RBP5.41□□□□□ -1.54
SYNE2-210ENST00000553455 SMYD2Q9NRG4 433 aa5.41□□□□□ -1.54
SYNE2-210ENST00000553455 SLC6A13Q9NSD5 602 aa5.41□□□□□ -1.54
SYNE2-210ENST00000553455 PLK2Q9NYY3 685 aa5.41□□□□□ -1.54
SYNE2-210ENST00000553455 CLIC5Q9NZA1 410 aa5.41□□□□□ -1.54
SYNE2-210ENST00000553455 EHD2Q9NZN4 543 aa5.41□□□□□ -1.54
SYNE2-210ENST00000553455 ADD3Q9UEY8 706 aaKnown RBP5.41□□□□□ -1.54
SYNE2-210ENST00000553455 NRBP1Q9UHY1 535 aa5.41□□□□□ -1.54
SYNE2-210ENST00000553455 A0A1W2PRG0 241 aa5.4□□□□□ -1.54
SYNE2-210ENST00000553455 USP17L23D6RBM5 183 aa5.4□□□□□ -1.54
SYNE2-210ENST00000553455 VILLO15195 856 aa5.4□□□□□ -1.54
SYNE2-210ENST00000553455 BCAT2O15382 392 aaPredicted RBP5.4□□□□□ -1.54
SYNE2-210ENST00000553455 EIF5BO60841 1220 aaKnown RBP5.4□□□□□ -1.54
SYNE2-210ENST00000553455 GJB3O75712 270 aa5.4□□□□□ -1.54
SYNE2-210ENST00000553455 MT-CYBP00156 380 aaPredicted RBP5.4□□□□□ -1.54
SYNE2-210ENST00000553455 HOXB5P09067 269 aa5.4□□□□□ -1.54
SYNE2-210ENST00000553455 ITGAXP20702 1163 aa5.4□□□□□ -1.54
SYNE2-210ENST00000553455 RFC1P35251 1148 aaPredicted RBP5.4□□□□□ -1.54
SYNE2-210ENST00000553455 CLCN5P51795 746 aa5.4□□□□□ -1.54
SYNE2-210ENST00000553455 MC1RQ01726 317 aa5.4□□□□□ -1.54
SYNE2-210ENST00000553455 CSTF3Q12996 717 aaKnown RBP5.4□□□□□ -1.54
SYNE2-210ENST00000553455 ACVR2BQ13705 512 aa5.4□□□□□ -1.54
SYNE2-210ENST00000553455 RUNX2Q13950 521 aa5.4□□□□□ -1.54
SYNE2-210ENST00000553455 FRG1Q14331 258 aaKnown RBP5.4□□□□□ -1.54
SYNE2-210ENST00000553455 INPP5JQ15735 1006 aaPredicted RBP5.4□□□□□ -1.54
SYNE2-210ENST00000553455 COL28A1Q2UY09 1125 aa5.4□□□□□ -1.54
SYNE2-210ENST00000553455 DUSP28Q4G0W2 176 aa5.4□□□□□ -1.54
SYNE2-210ENST00000553455 PLEKHO1Q53GL0 409 aaPredicted RBP5.4□□□□□ -1.54
SYNE2-210ENST00000553455 C10orf25Q5T742 122 aa5.4□□□□□ -1.54
SYNE2-210ENST00000553455 LCE5AQ5TCM9 118 aa5.4□□□□□ -1.54
SYNE2-210ENST00000553455 SZRD1Q7Z422 152 aa5.4□□□□□ -1.54
SYNE2-210ENST00000553455 PIP4P1Q86T03 277 aa5.4□□□□□ -1.54
SYNE2-210ENST00000553455 ARHGAP12Q8IWW6 846 aa5.4□□□□□ -1.54
SYNE2-210ENST00000553455 SUGP2Q8IX01 1082 aaKnown RBP eCLIP5.4□□□□□ -1.54
SYNE2-210ENST00000553455 FAM217AQ8IXS0 508 aa5.4□□□□□ -1.54
SYNE2-210ENST00000553455 CCDC89Q8N998 374 aa5.4□□□□□ -1.54
SYNE2-210ENST00000553455 GJC3Q8NFK1 279 aa5.4□□□□□ -1.54
SYNE2-210ENST00000553455 CEP76Q8TAP6 659 aa5.4□□□□□ -1.54
SYNE2-210ENST00000553455 SCFD2Q8WU76 684 aa5.4□□□□□ -1.54
SYNE2-210ENST00000553455 SNAPC3Q92966 411 aa5.4□□□□□ -1.54
SYNE2-210ENST00000553455 SMARCE1Q969G3 411 aa5.4□□□□□ -1.54
SYNE2-210ENST00000553455 COQ8BQ96D53 544 aa5.4□□□□□ -1.54
SYNE2-210ENST00000553455 FAM120BQ96EK7 910 aaKnown RBP5.4□□□□□ -1.54
SYNE2-210ENST00000553455 MXRA8Q9BRK3 442 aa5.4□□□□□ -1.54
SYNE2-210ENST00000553455 CENPOQ9BU64 300 aa5.4□□□□□ -1.54
SYNE2-210ENST00000553455 LHPPQ9H008 270 aa5.4□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms