RNA–Protein interactions for RNA: ENST00000553280.1

SCFD1-209, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 574 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-209ENST00000553280 GARNL3Q5VVW2 1013 aa5.28□□□□□ -1.56
SCFD1-209ENST00000553280 TRIM74Q86UV6 250 aa5.28□□□□□ -1.56
SCFD1-209ENST00000553280 TRIM73Q86UV7 250 aa5.28□□□□□ -1.56
SCFD1-209ENST00000553280 SGCDQ92629 289 aa5.28□□□□□ -1.56
SCFD1-209ENST00000553280 NELL1Q92832 810 aa5.28□□□□□ -1.56
SCFD1-209ENST00000553280 CCDC34Q96HJ3 373 aa5.28□□□□□ -1.56
SCFD1-209ENST00000553280 CRAMP1Q96RY5 1269 aa5.28□□□□□ -1.56
SCFD1-209ENST00000553280 NCAPGQ9BPX3 1015 aa5.28□□□□□ -1.56
SCFD1-209ENST00000553280 SLC6A13Q9NSD5 602 aa5.28□□□□□ -1.56
SCFD1-209ENST00000553280 SERGEFQ9UGK8 458 aa5.28□□□□□ -1.56
SCFD1-209ENST00000553280 ZNF711Q9Y462 761 aa5.28□□□□□ -1.56
SCFD1-209ENST00000553280 SLC22A23A1A5C7 686 aa5.27□□□□□ -1.57
SCFD1-209ENST00000553280 NPIPB11E5RHQ5 1161 aa5.27□□□□□ -1.57
SCFD1-209ENST00000553280 EBAG9O00559 213 aa5.27□□□□□ -1.57
SCFD1-209ENST00000553280 TP73O15350 636 aa5.27□□□□□ -1.57
SCFD1-209ENST00000553280 RNMTO43148 476 aaKnown RBP5.27□□□□□ -1.57
SCFD1-209ENST00000553280 NEURL1O76050 574 aa5.27□□□□□ -1.57
SCFD1-209ENST00000553280 MT-CYBP00156 380 aaPredicted RBP5.27□□□□□ -1.57
SCFD1-209ENST00000553280 RB1P06400 928 aa5.27□□□□□ -1.57
SCFD1-209ENST00000553280 SELLP14151 372 aa5.27□□□□□ -1.57
SCFD1-209ENST00000553280 GABRB1P18505 474 aa5.27□□□□□ -1.57
SCFD1-209ENST00000553280 EDN2P20800 178 aa5.27□□□□□ -1.57
SCFD1-209ENST00000553280 SAT1P21673 171 aa5.27□□□□□ -1.57
SCFD1-209ENST00000553280 RYKP34925 604 aa5.27□□□□□ -1.57
SCFD1-209ENST00000553280 HSD17B4P51659 736 aa5.27□□□□□ -1.57
SCFD1-209ENST00000553280 HDAC4P56524 1084 aa5.27□□□□□ -1.57
SCFD1-209ENST00000553280 CLDN2P57739 230 aa5.27□□□□□ -1.57
SCFD1-209ENST00000553280 PGM5Q15124 567 aa5.27□□□□□ -1.57
SCFD1-209ENST00000553280 SYTL3Q4VX76 610 aa5.27□□□□□ -1.57
SCFD1-209ENST00000553280 BMP2KLQ5H9B9 411 aa5.27□□□□□ -1.57
SCFD1-209ENST00000553280 HMBOX1Q6NT76 420 aa5.27□□□□□ -1.57
SCFD1-209ENST00000553280 AAGABQ6PD74 315 aa5.27□□□□□ -1.57
SCFD1-209ENST00000553280 LRIG3Q6UXM1 1119 aa5.27□□□□□ -1.57
SCFD1-209ENST00000553280 GLDNQ6ZMI3 551 aaPredicted RBP5.27□□□□□ -1.57
SCFD1-209ENST00000553280 CYB5R4Q7L1T6 521 aa5.27□□□□□ -1.57
SCFD1-209ENST00000553280 ADGRA1Q86SQ6 560 aa5.27□□□□□ -1.57
SCFD1-209ENST00000553280 TBC1D26Q86UD7 250 aa5.27□□□□□ -1.57
SCFD1-209ENST00000553280 IGFN1Q86VF2 1251 aa5.27□□□□□ -1.57
SCFD1-209ENST00000553280 KIAA2013Q8IYS2 634 aa5.27□□□□□ -1.57
SCFD1-209ENST00000553280 CADM3Q8N126 398 aa5.27□□□□□ -1.57
SCFD1-209ENST00000553280 POC5Q8NA72 575 aa5.27□□□□□ -1.57
SCFD1-209ENST00000553280 TTC14Q96N46 770 aa5.27□□□□□ -1.57
SCFD1-209ENST00000553280 PDZD7Q9H5P4 517 aa5.27□□□□□ -1.57
SCFD1-209ENST00000553280 ACTR5Q9H9F9 607 aaPredicted RBP5.27□□□□□ -1.57
SCFD1-209ENST00000553280 KIF9Q9HAQ2 790 aa5.27□□□□□ -1.57
SCFD1-209ENST00000553280 GIMAP4Q9NUV9 329 aa5.27□□□□□ -1.57
SCFD1-209ENST00000553280 PLK2Q9NYY3 685 aa5.27□□□□□ -1.57
SCFD1-209ENST00000553280 MRPL15Q9P015 296 aaKnown RBP5.27□□□□□ -1.57
SCFD1-209ENST00000553280 CNOT8Q9UFF9 292 aaKnown RBP5.27□□□□□ -1.57
SCFD1-209ENST00000553280 PACSIN3Q9UKS6 424 aa5.27□□□□□ -1.57
SCFD1-209ENST00000553280 CARD8Q9Y2G2 431 aa5.27□□□□□ -1.57
SCFD1-209ENST00000553280 FAM96BQ9Y3D0 163 aa5.27□□□□□ -1.57
SCFD1-209ENST00000553280 MAGED1Q9Y5V3 778 aaPredicted RBP5.27□□□□□ -1.57
SCFD1-209ENST00000553280 AOX1Q06278 1338 aa5.26□□□□□ -1.57
SCFD1-209ENST00000553280 FAM237AA0A1B0GTK4 181 aa5.26□□□□□ -1.57
SCFD1-209ENST00000553280 SMIM22K7EJ46 135 aa5.26□□□□□ -1.57
SCFD1-209ENST00000553280 ADAM20O43506 726 aa5.26□□□□□ -1.57
SCFD1-209ENST00000553280 PPFIA2O75334 1257 aa5.26□□□□□ -1.57
SCFD1-209ENST00000553280 RNF8O76064 485 aa5.26□□□□□ -1.57
SCFD1-209ENST00000553280 TMCC1O94876 653 aa5.26□□□□□ -1.57
SCFD1-209ENST00000553280 WNT1P04628 370 aa5.26□□□□□ -1.57
SCFD1-209ENST00000553280 APOA4P06727 396 aa5.26□□□□□ -1.57
SCFD1-209ENST00000553280 CD63P08962 238 aa5.26□□□□□ -1.57
SCFD1-209ENST00000553280 NHLRC4P0CG21 123 aaPredicted RBP5.26□□□□□ -1.57
SCFD1-209ENST00000553280 GPD1P21695 349 aa5.26□□□□□ -1.57
SCFD1-209ENST00000553280 HOXA13P31271 388 aaPredicted RBP5.26□□□□□ -1.57
SCFD1-209ENST00000553280 CLCNKBP51801 687 aa5.26□□□□□ -1.57
SCFD1-209ENST00000553280 MRPL12P52815 198 aaKnown RBP5.26□□□□□ -1.57
SCFD1-209ENST00000553280 SLC12A2P55011 1212 aa5.26□□□□□ -1.57
SCFD1-209ENST00000553280 YPEL5P62699 121 aa5.26□□□□□ -1.57
SCFD1-209ENST00000553280 HSF1Q00613 529 aa5.26□□□□□ -1.57
SCFD1-209ENST00000553280 PKP1Q13835 747 aa5.26□□□□□ -1.57
SCFD1-209ENST00000553280 PCLAFQ15004 111 aa5.26□□□□□ -1.57
SCFD1-209ENST00000553280 SHBQ15464 509 aa5.26□□□□□ -1.57
SCFD1-209ENST00000553280 NTRK2Q16620 822 aa5.26□□□□□ -1.57
SCFD1-209ENST00000553280 TMEM266Q2M3C6 531 aa5.26□□□□□ -1.57
SCFD1-209ENST00000553280 EARS2Q5JPH6 523 aaKnown RBP5.26□□□□□ -1.57
SCFD1-209ENST00000553280 AKNAD1Q5T1N1 836 aa5.26□□□□□ -1.57
SCFD1-209ENST00000553280 AMIGO2Q86SJ2 522 aa5.26□□□□□ -1.57
SCFD1-209ENST00000553280 CCDC25Q86WR0 208 aa5.26□□□□□ -1.57
SCFD1-209ENST00000553280 TMC8Q8IU68 726 aa5.26□□□□□ -1.57
SCFD1-209ENST00000553280 DHX40Q8IX18 779 aaKnown RBP5.26□□□□□ -1.57
SCFD1-209ENST00000553280 TEX11Q8IYF3 940 aa5.26□□□□□ -1.57
SCFD1-209ENST00000553280 PNLDC1Q8NA58 520 aaKnown RBP5.26□□□□□ -1.57
SCFD1-209ENST00000553280 KCTD6Q8NC69 237 aa5.26□□□□□ -1.57
SCFD1-209ENST00000553280 SLC22A18Q96BI1 424 aa5.26□□□□□ -1.57
SCFD1-209ENST00000553280 SARAFQ96BY9 339 aa5.26□□□□□ -1.57
SCFD1-209ENST00000553280 PABPC5Q96DU9 382 aaKnown RBP5.26□□□□□ -1.57
SCFD1-209ENST00000553280 CLMNQ96JQ2 1002 aa5.26□□□□□ -1.57
SCFD1-209ENST00000553280 CNDP2Q96KP4 475 aaKnown RBP5.26□□□□□ -1.57
SCFD1-209ENST00000553280 OR10A4Q9H209 315 aa5.26□□□□□ -1.57
SCFD1-209ENST00000553280 MOV10Q9HCE1 1003 aaKnown RBP5.26□□□□□ -1.57
SCFD1-209ENST00000553280 CTNNAL1Q9UBT7 734 aa5.26□□□□□ -1.57
SCFD1-209ENST00000553280 FBXL17Q9UF56 701 aa5.26□□□□□ -1.57
SCFD1-209ENST00000553280 WNT6Q9Y6F9 365 aa5.26□□□□□ -1.57
SCFD1-209ENST00000553280 TRBV5-7A0A0A0MS05 114 aa5.25□□□□□ -1.57
SCFD1-209ENST00000553280 A8MV72 311 aaPredicted RBP5.25□□□□□ -1.57
SCFD1-209ENST00000553280 UBE2CO00762 179 aa5.25□□□□□ -1.57
SCFD1-209ENST00000553280 HCRTR2O43614 444 aa5.25□□□□□ -1.57
SCFD1-209ENST00000553280 SLC25A17O43808 307 aa5.25□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms