RNA–Protein interactions for RNA: ENST00000553039.1

CKAP4-203, Transcript of cytoskeleton associated protein 4, humanhuman

TSL 4

Gene CKAP4, Length 573 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP4-203ENST00000553039 HBS1LQ9Y450 684 aaKnown RBP5.29□□□□□ -1.56
CKAP4-203ENST00000553039 PCDHB14Q9Y5E9 798 aa5.29□□□□□ -1.56
CKAP4-203ENST00000553039 RNF215Q9Y6U7 377 aa5.29□□□□□ -1.56
CKAP4-203ENST00000553039 ZFC3H1O60293 1989 aaKnown RBP5.29□□□□□ -1.56
CKAP4-203ENST00000553039 ANKHD1Q8IWZ3 2542 aaKnown RBP5.29□□□□□ -1.56
CKAP4-203ENST00000553039 OBSL1O75147 1896 aa5.28□□□□□ -1.56
CKAP4-203ENST00000553039 NF1P21359 2839 aa5.28□□□□□ -1.56
CKAP4-203ENST00000553039 A0A1W2PQM1 296 aa5.28□□□□□ -1.56
CKAP4-203ENST00000553039 GOLGA8IPA6NC78 632 aa5.28□□□□□ -1.56
CKAP4-203ENST00000553039 GOLGA8JA6NMD2 632 aa5.28□□□□□ -1.56
CKAP4-203ENST00000553039 TISP43B9A030 160 aa5.28□□□□□ -1.56
CKAP4-203ENST00000553039 PDE2AO00408 941 aaPredicted RBP5.28□□□□□ -1.56
CKAP4-203ENST00000553039 TOR1BO14657 336 aa5.28□□□□□ -1.56
CKAP4-203ENST00000553039 ALOX15BO15296 676 aa5.28□□□□□ -1.56
CKAP4-203ENST00000553039 GCATO75600 419 aa5.28□□□□□ -1.56
CKAP4-203ENST00000553039 BEST1O76090 585 aa5.28□□□□□ -1.56
CKAP4-203ENST00000553039 PAK4O96013 591 aaPredicted RBP5.28□□□□□ -1.56
CKAP4-203ENST00000553039 B3GALT4O96024 378 aa5.28□□□□□ -1.56
CKAP4-203ENST00000553039 MYCLP1P12525 358 aaPredicted RBP5.28□□□□□ -1.56
CKAP4-203ENST00000553039 FDPSP14324 419 aaKnown RBP5.28□□□□□ -1.56
CKAP4-203ENST00000553039 DRD2P14416 443 aa5.28□□□□□ -1.56
CKAP4-203ENST00000553039 GLB1P16278 677 aa5.28□□□□□ -1.56
CKAP4-203ENST00000553039 CSTF2P33240 577 aaKnown RBP eCLIP5.28□□□□□ -1.56
CKAP4-203ENST00000553039 PTGER4P35408 488 aa5.28□□□□□ -1.56
CKAP4-203ENST00000553039 ETV5P41161 510 aa5.28□□□□□ -1.56
CKAP4-203ENST00000553039 UBA7P41226 1012 aa5.28□□□□□ -1.56
CKAP4-203ENST00000553039 STAT1P42224 750 aa5.28□□□□□ -1.56
CKAP4-203ENST00000553039 SLC8A3P57103 927 aa5.28□□□□□ -1.56
CKAP4-203ENST00000553039 NUCB2P80303 420 aa5.28□□□□□ -1.56
CKAP4-203ENST00000553039 PPARDQ03181 441 aa5.28□□□□□ -1.56
CKAP4-203ENST00000553039 ABHD18Q0P651 414 aa5.28□□□□□ -1.56
CKAP4-203ENST00000553039 MRPL49Q13405 166 aaKnown RBP5.28□□□□□ -1.56
CKAP4-203ENST00000553039 C1orf61Q13536 156 aa5.28□□□□□ -1.56
CKAP4-203ENST00000553039 TRA2AQ13595 282 aaKnown RBP eCLIP5.28□□□□□ -1.56
CKAP4-203ENST00000553039 SLC12A1Q13621 1099 aa5.28□□□□□ -1.56
CKAP4-203ENST00000553039 DRAP1Q14919 205 aaPredicted RBP5.28□□□□□ -1.56
CKAP4-203ENST00000553039 ANKRD1Q15327 319 aa5.28□□□□□ -1.56
CKAP4-203ENST00000553039 PPP2R5EQ16537 467 aa5.28□□□□□ -1.56
CKAP4-203ENST00000553039 SMTNL2Q2TAL5 461 aa5.28□□□□□ -1.56
CKAP4-203ENST00000553039 PIK3R6Q5UE93 754 aa5.28□□□□□ -1.56
CKAP4-203ENST00000553039 KYAT3Q6YP21 454 aaKnown RBP5.28□□□□□ -1.56
CKAP4-203ENST00000553039 CENPQQ7L2Z9 268 aaPredicted RBP5.28□□□□□ -1.56
CKAP4-203ENST00000553039 TMPRSS9Q7Z410 1059 aa5.28□□□□□ -1.56
CKAP4-203ENST00000553039 SCD5Q86SK9 330 aa5.28□□□□□ -1.56
CKAP4-203ENST00000553039 ACOT1Q86TX2 421 aa5.28□□□□□ -1.56
CKAP4-203ENST00000553039 UNC93AQ86WB7 457 aa5.28□□□□□ -1.56
CKAP4-203ENST00000553039 GKN2Q86XP6 184 aa5.28□□□□□ -1.56
CKAP4-203ENST00000553039 HPS6Q86YV9 775 aa5.28□□□□□ -1.56
CKAP4-203ENST00000553039 ZC3H3Q8IXZ2 948 aaKnown RBP5.28□□□□□ -1.56
CKAP4-203ENST00000553039 NLGN4XQ8N0W4 816 aa5.28□□□□□ -1.56
CKAP4-203ENST00000553039 SLC22A18ASQ8N1D0 253 aa5.28□□□□□ -1.56
CKAP4-203ENST00000553039 AGBL5Q8NDL9 886 aa5.28□□□□□ -1.56
CKAP4-203ENST00000553039 ZMIZ2Q8NF64 920 aa5.28□□□□□ -1.56
CKAP4-203ENST00000553039 NLGN4YQ8NFZ3 816 aaPredicted RBP5.28□□□□□ -1.56
CKAP4-203ENST00000553039 OR5B17Q8NGF7 314 aa5.28□□□□□ -1.56
CKAP4-203ENST00000553039 KCTD13Q8WZ19 329 aa5.28□□□□□ -1.56
CKAP4-203ENST00000553039 AZIN2Q96A70 460 aa5.28□□□□□ -1.56
CKAP4-203ENST00000553039 CYFIP2Q96F07 1278 aa5.28□□□□□ -1.56
CKAP4-203ENST00000553039 NOX5Q96PH1 765 aa5.28□□□□□ -1.56
CKAP4-203ENST00000553039 LENG8Q96PV6 779 aaPredicted RBP5.28□□□□□ -1.56
CKAP4-203ENST00000553039 ZPBPQ9BS86 351 aa5.28□□□□□ -1.56
CKAP4-203ENST00000553039 MMTAG2Q9BU76 263 aaKnown RBP5.28□□□□□ -1.56
CKAP4-203ENST00000553039 DDA1Q9BW61 102 aa5.28□□□□□ -1.56
CKAP4-203ENST00000553039 SPATA9Q9BWV2 254 aa5.28□□□□□ -1.56
CKAP4-203ENST00000553039 UBXN6Q9BZV1 441 aa5.28□□□□□ -1.56
CKAP4-203ENST00000553039 CLEC4MQ9H2X3 399 aaPredicted RBP5.28□□□□□ -1.56
CKAP4-203ENST00000553039 MRPL44Q9H9J2 332 aaKnown RBP5.28□□□□□ -1.56
CKAP4-203ENST00000553039 CHST11Q9NPF2 352 aa5.28□□□□□ -1.56
CKAP4-203ENST00000553039 MRPL40Q9NQ50 206 aaKnown RBP5.28□□□□□ -1.56
CKAP4-203ENST00000553039 SLTMQ9NWH9 1034 aaKnown RBP eCLIP5.28□□□□□ -1.56
CKAP4-203ENST00000553039 SLC39A1Q9NY26 324 aa5.28□□□□□ -1.56
CKAP4-203ENST00000553039 APOBEC3BQ9UH17 382 aaKnown RBP5.28□□□□□ -1.56
CKAP4-203ENST00000553039 GPR34Q9UPC5 381 aa5.28□□□□□ -1.56
CKAP4-203ENST00000553039 MAPRE3Q9UPY8 281 aa5.28□□□□□ -1.56
CKAP4-203ENST00000553039 POLHQ9Y253 713 aa5.28□□□□□ -1.56
CKAP4-203ENST00000553039 SDK2Q58EX2 2172 aa5.28□□□□□ -1.56
CKAP4-203ENST00000553039 ITIH6Q6UXX5 1313 aa5.27□□□□□ -1.57
CKAP4-203ENST00000553039 POM121BA6NF01 834 aa5.27□□□□□ -1.57
CKAP4-203ENST00000553039 ANKUB1A6NFN9 424 aa5.27□□□□□ -1.57
CKAP4-203ENST00000553039 PP2D1A8MPX8 630 aa5.27□□□□□ -1.57
CKAP4-203ENST00000553039 TMEM110-MUSTN1A8MSY1 372 aa5.27□□□□□ -1.57
CKAP4-203ENST00000553039 PRSS44E7EML9 344 aa5.27□□□□□ -1.57
CKAP4-203ENST00000553039 K7EM74 188 aa5.27□□□□□ -1.57
CKAP4-203ENST00000553039 AGRPO00253 132 aa5.27□□□□□ -1.57
CKAP4-203ENST00000553039 DPM1O60762 260 aa5.27□□□□□ -1.57
CKAP4-203ENST00000553039 REC8O95072 547 aa5.27□□□□□ -1.57
CKAP4-203ENST00000553039 KIF20AO95235 890 aa5.27□□□□□ -1.57
CKAP4-203ENST00000553039 CBX6O95503 412 aa5.27□□□□□ -1.57
CKAP4-203ENST00000553039 CPNE6O95741 557 aa5.27□□□□□ -1.57
CKAP4-203ENST00000553039 FAM153BP0C7A2 387 aa5.27□□□□□ -1.57
CKAP4-203ENST00000553039 FGF3P11487 239 aaPredicted RBP5.27□□□□□ -1.57
CKAP4-203ENST00000553039 CCL4P13236 92 aa5.27□□□□□ -1.57
CKAP4-203ENST00000553039 CD99P14209 185 aa5.27□□□□□ -1.57
CKAP4-203ENST00000553039 TSHRP16473 764 aa5.27□□□□□ -1.57
CKAP4-203ENST00000553039 GAP43P17677 238 aa5.27□□□□□ -1.57
CKAP4-203ENST00000553039 DDIT3P35638 169 aa5.27□□□□□ -1.57
CKAP4-203ENST00000553039 PGDP52209 483 aa5.27□□□□□ -1.57
CKAP4-203ENST00000553039 NDST1P52848 882 aa5.27□□□□□ -1.57
CKAP4-203ENST00000553039 YPEL5P62699 121 aa5.27□□□□□ -1.57
CKAP4-203ENST00000553039 CDH18Q13634 790 aa5.27□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms