RNA–Protein interactions for RNA: ENST00000550009.1

COX6A1-203, Transcript of cytochrome c oxidase subunit 6A1, humanhuman

TSL 2

Gene COX6A1, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COX6A1-203ENST00000550009 NAT10Q9H0A0 1025 aaKnown RBP16.12■□□□□ 0.17
COX6A1-203ENST00000550009 PARVAQ9NVD7 372 aa16.12■□□□□ 0.17
COX6A1-203ENST00000550009 ETNK2Q9NVF9 386 aa16.12■□□□□ 0.17
COX6A1-203ENST00000550009 TPX2Q9ULW0 747 aaKnown RBP16.12■□□□□ 0.17
COX6A1-203ENST00000550009 MYO6Q9UM54 1294 aa16.12■□□□□ 0.17
COX6A1-203ENST00000550009 GPSM3Q9Y4H4 160 aa16.12■□□□□ 0.17
COX6A1-203ENST00000550009 SMG1Q96Q15 3661 aaKnown RBP16.11■□□□□ 0.17
COX6A1-203ENST00000550009 A6NNZ2 444 aa16.11■□□□□ 0.17
COX6A1-203ENST00000550009 EEF2KO00418 725 aaKnown RBP16.11■□□□□ 0.17
COX6A1-203ENST00000550009 YKT6O15498 198 aa16.11■□□□□ 0.17
COX6A1-203ENST00000550009 LRCH4O75427 683 aa16.11■□□□□ 0.17
COX6A1-203ENST00000550009 CELA2BP08218 269 aaPredicted RBP16.11■□□□□ 0.17
COX6A1-203ENST00000550009 ERCC2P18074 760 aa16.11■□□□□ 0.17
COX6A1-203ENST00000550009 FANCCQ00597 558 aa16.11■□□□□ 0.17
COX6A1-203ENST00000550009 INSM1Q01101 510 aaPredicted RBP16.11■□□□□ 0.17
COX6A1-203ENST00000550009 OVGP1Q12889 678 aa16.11■□□□□ 0.17
COX6A1-203ENST00000550009 PDE1CQ14123 709 aaPredicted RBP16.11■□□□□ 0.17
COX6A1-203ENST00000550009 PPP6R3Q5H9R7 873 aaPredicted RBP16.11■□□□□ 0.17
COX6A1-203ENST00000550009 ERMARDQ5T6L9 678 aa16.11■□□□□ 0.17
COX6A1-203ENST00000550009 KYAT3Q6YP21 454 aaKnown RBP16.11■□□□□ 0.17
COX6A1-203ENST00000550009 TTC7BQ86TV6 843 aa16.11■□□□□ 0.17
COX6A1-203ENST00000550009 OXR1Q8N573 874 aa16.11■□□□□ 0.17
COX6A1-203ENST00000550009 TSEN2Q8NCE0 465 aaKnown RBP16.11■□□□□ 0.17
COX6A1-203ENST00000550009 CPLX3Q8WVH0 158 aa16.11■□□□□ 0.17
COX6A1-203ENST00000550009 HNRNPLLQ8WVV9 542 aaKnown RBP16.11■□□□□ 0.17
COX6A1-203ENST00000550009 CENPTQ96BT3 561 aa16.11■□□□□ 0.17
COX6A1-203ENST00000550009 GDAP1L1Q96MZ0 367 aa16.11■□□□□ 0.17
COX6A1-203ENST00000550009 CATSPERBQ9H7T0 1116 aa16.11■□□□□ 0.17
COX6A1-203ENST00000550009 CWC15Q9P013 229 aaKnown RBP16.11■□□□□ 0.17
COX6A1-203ENST00000550009 UBA2Q9UBT2 640 aaPredicted RBP16.11■□□□□ 0.17
COX6A1-203ENST00000550009 HS3ST3A1Q9Y663 406 aa16.11■□□□□ 0.17
COX6A1-203ENST00000550009 ATMQ13315 3056 aa16.1■□□□□ 0.17
COX6A1-203ENST00000550009 A0A1W2PQC6 194 aa16.1■□□□□ 0.17
COX6A1-203ENST00000550009 ANKRD62A6NC57 917 aa16.1■□□□□ 0.17
COX6A1-203ENST00000550009 NEMP1O14524 444 aa16.1■□□□□ 0.17
COX6A1-203ENST00000550009 PRAMEF11O60813 436 aa16.1■□□□□ 0.17
COX6A1-203ENST00000550009 IGSF6O95976 241 aa16.1■□□□□ 0.17
COX6A1-203ENST00000550009 SERPINC1P01008 464 aa16.1■□□□□ 0.17
COX6A1-203ENST00000550009 CKMT2P17540 419 aa16.1■□□□□ 0.17
COX6A1-203ENST00000550009 YBEYP58557 167 aaPredicted RBP16.1■□□□□ 0.17
COX6A1-203ENST00000550009 PFN3P60673 137 aa16.1■□□□□ 0.17
COX6A1-203ENST00000550009 C1orf61Q13536 156 aa16.1■□□□□ 0.17
COX6A1-203ENST00000550009 PTPRRQ15256 657 aa16.1■□□□□ 0.17
COX6A1-203ENST00000550009 KLHL40Q2TBA0 621 aa16.1■□□□□ 0.17
COX6A1-203ENST00000550009 FAM182AQ5T1J6 154 aa16.1■□□□□ 0.17
COX6A1-203ENST00000550009 AFMIDQ63HM1 303 aa16.1■□□□□ 0.17
COX6A1-203ENST00000550009 CAMK1DQ8IU85 385 aa16.1■□□□□ 0.17
COX6A1-203ENST00000550009 GALNT15Q8N3T1 639 aa16.1■□□□□ 0.17
COX6A1-203ENST00000550009 TP53I13Q8NBR0 393 aaPredicted RBP16.1■□□□□ 0.17
COX6A1-203ENST00000550009 OR4C6Q8NH72 309 aa16.1■□□□□ 0.17
COX6A1-203ENST00000550009 ARHGEF26Q96DR7 871 aa16.1■□□□□ 0.17
COX6A1-203ENST00000550009 VCPIP1Q96JH7 1222 aa16.1■□□□□ 0.17
COX6A1-203ENST00000550009 RETREG1Q9H6L5 497 aa16.1■□□□□ 0.17
COX6A1-203ENST00000550009 CACNA1GO43497 2377 aa16.09■□□□□ 0.17
COX6A1-203ENST00000550009 ZFC3H1O60293 1989 aaKnown RBP16.09■□□□□ 0.17
COX6A1-203ENST00000550009 SPTY2D1-AS1A0A0U1RR47 76 aa16.09■□□□□ 0.17
COX6A1-203ENST00000550009 K7ESM1 405 aa16.09■□□□□ 0.17
COX6A1-203ENST00000550009 DFFAO00273 331 aa16.09■□□□□ 0.17
COX6A1-203ENST00000550009 TSPAN6O43657 245 aa16.09■□□□□ 0.17
COX6A1-203ENST00000550009 MAGEC1O60732 1142 aa16.09■□□□□ 0.17
COX6A1-203ENST00000550009 GCATO75600 419 aa16.09■□□□□ 0.17
COX6A1-203ENST00000550009 CCDC172P0C7W6 258 aa16.09■□□□□ 0.17
COX6A1-203ENST00000550009 JUPP14923 745 aa16.09■□□□□ 0.17
COX6A1-203ENST00000550009 AMPD1P23109 780 aa16.09■□□□□ 0.17
COX6A1-203ENST00000550009 GEMIN4P57678 1058 aaKnown RBP16.09■□□□□ 0.17
COX6A1-203ENST00000550009 CCDC15Q0P6D6 951 aa16.09■□□□□ 0.17
COX6A1-203ENST00000550009 SGCGQ13326 291 aa16.09■□□□□ 0.17
COX6A1-203ENST00000550009 ZNF211Q13398 564 aaPredicted RBP16.09■□□□□ 0.17
COX6A1-203ENST00000550009 DPYSQ14117 519 aa16.09■□□□□ 0.17
COX6A1-203ENST00000550009 IRF4Q15306 451 aa16.09■□□□□ 0.17
COX6A1-203ENST00000550009 COL28A1Q2UY09 1125 aa16.09■□□□□ 0.17
COX6A1-203ENST00000550009 PARP15Q460N3 678 aa16.09■□□□□ 0.17
COX6A1-203ENST00000550009 FILIP1LQ4L180 1135 aa16.09■□□□□ 0.17
COX6A1-203ENST00000550009 INO80DQ53TQ3 878 aaPredicted RBP16.09■□□□□ 0.17
COX6A1-203ENST00000550009 RFX8Q6ZV50 586 aa16.09■□□□□ 0.17
COX6A1-203ENST00000550009 ZNF548Q8NEK5 533 aaPredicted RBP16.09■□□□□ 0.17
COX6A1-203ENST00000550009 APOLD1Q96LR9 279 aa16.09■□□□□ 0.17
COX6A1-203ENST00000550009 LENG8Q96PV6 779 aaPredicted RBP16.09■□□□□ 0.17
COX6A1-203ENST00000550009 THAP2Q9H0W7 228 aa16.09■□□□□ 0.17
COX6A1-203ENST00000550009 ISCUQ9H1K1 167 aa16.09■□□□□ 0.17
COX6A1-203ENST00000550009 PCDH12Q9NPG4 1184 aa16.09■□□□□ 0.17
COX6A1-203ENST00000550009 LHX6Q9UPM6 363 aa16.09■□□□□ 0.17
COX6A1-203ENST00000550009 PCDHGA1Q9Y5H4 931 aa16.09■□□□□ 0.17
COX6A1-203ENST00000550009 UNC13CQ8NB66 2214 aa16.09■□□□□ 0.17
COX6A1-203ENST00000550009 IGSF10Q6WRI0 2623 aa16.08■□□□□ 0.17
COX6A1-203ENST00000550009 CXorf51AA0A1B0GTR3 108 aa16.08■□□□□ 0.16
COX6A1-203ENST00000550009 ZSCAN5CA6NGD5 496 aaPredicted RBP16.08■□□□□ 0.16
COX6A1-203ENST00000550009 A8MX80 341 aa16.08■□□□□ 0.16
COX6A1-203ENST00000550009 FGF10O15520 208 aaPredicted RBP16.08■□□□□ 0.16
COX6A1-203ENST00000550009 TLX3O43711 291 aaPredicted RBP16.08■□□□□ 0.16
COX6A1-203ENST00000550009 GZMAP12544 262 aa16.08■□□□□ 0.16
COX6A1-203ENST00000550009 ACP1P24666 158 aa16.08■□□□□ 0.16
COX6A1-203ENST00000550009 DEFB133Q30KQ1 61 aa16.08■□□□□ 0.16
COX6A1-203ENST00000550009 CRTC1Q6UUV9 634 aa16.08■□□□□ 0.16
COX6A1-203ENST00000550009 TMPRSS12Q86WS5 348 aa16.08■□□□□ 0.16
COX6A1-203ENST00000550009 PELI3Q8N2H9 469 aa16.08■□□□□ 0.16
COX6A1-203ENST00000550009 LRRN4Q8WUT4 740 aa16.08■□□□□ 0.16
COX6A1-203ENST00000550009 HSPH1Q92598 858 aa16.08■□□□□ 0.16
COX6A1-203ENST00000550009 OSBPL1AQ9BXW6 950 aa16.08■□□□□ 0.16
COX6A1-203ENST00000550009 ZWILCHQ9H900 591 aa16.08■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms