RNA–Protein interactions for RNA: ENST00000549162.5

SCAF11-212, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 1 (best) BASIC

Gene SCAF11, Length 3,934 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-212ENST00000549162 RABGAP1LQ5R372 815 aa4.96□□□□□ -1.62
SCAF11-212ENST00000549162 WSCD1Q658N2 575 aa4.96□□□□□ -1.62
SCAF11-212ENST00000549162 TAC4Q86UU9 113 aa4.96□□□□□ -1.62
SCAF11-212ENST00000549162 CAND1Q86VP6 1230 aaKnown RBP4.96□□□□□ -1.62
SCAF11-212ENST00000549162 TMEM126BQ8IUX1 230 aa4.96□□□□□ -1.62
SCAF11-212ENST00000549162 FBXO25Q8TCJ0 367 aa4.96□□□□□ -1.62
SCAF11-212ENST00000549162 ZNF473Q8WTR7 871 aaKnown RBP4.96□□□□□ -1.62
SCAF11-212ENST00000549162 SLC44A1Q8WWI5 657 aa4.96□□□□□ -1.62
SCAF11-212ENST00000549162 ZNF669Q96BR6 464 aaPredicted RBP4.96□□□□□ -1.62
SCAF11-212ENST00000549162 LRRC45Q96CN5 670 aa4.96□□□□□ -1.62
SCAF11-212ENST00000549162 HSH2DQ96JZ2 352 aa4.96□□□□□ -1.62
SCAF11-212ENST00000549162 ASB2Q96Q27 587 aa4.96□□□□□ -1.62
SCAF11-212ENST00000549162 IL22Q9GZX6 179 aa4.96□□□□□ -1.62
SCAF11-212ENST00000549162 TMEM39AQ9NV64 488 aa4.96□□□□□ -1.62
SCAF11-212ENST00000549162 CWC15Q9P013 229 aaKnown RBP4.96□□□□□ -1.62
SCAF11-212ENST00000549162 MTCH2Q9Y6C9 303 aa4.96□□□□□ -1.62
SCAF11-212ENST00000549162 E5RJQ4 531 aa4.95□□□□□ -1.62
SCAF11-212ENST00000549162 CHUKO15111 745 aa4.95□□□□□ -1.62
SCAF11-212ENST00000549162 PRPSAP2O60256 369 aa4.95□□□□□ -1.62
SCAF11-212ENST00000549162 SCELO95171 688 aa4.95□□□□□ -1.62
SCAF11-212ENST00000549162 PGK1P00558 417 aa4.95□□□□□ -1.62
SCAF11-212ENST00000549162 FGF4P08620 206 aa4.95□□□□□ -1.62
SCAF11-212ENST00000549162 HOXB1P14653 301 aaPredicted RBP4.95□□□□□ -1.62
SCAF11-212ENST00000549162 PGAM1P18669 254 aa4.95□□□□□ -1.62
SCAF11-212ENST00000549162 CACNA2D1P54289 1103 aa4.95□□□□□ -1.62
SCAF11-212ENST00000549162 UAP1Q16222 522 aaPredicted RBP4.95□□□□□ -1.62
SCAF11-212ENST00000549162 DGKKQ5KSL6 1271 aa4.95□□□□□ -1.62
SCAF11-212ENST00000549162 YOD1Q5VVQ6 348 aaPredicted RBP4.95□□□□□ -1.62
SCAF11-212ENST00000549162 CCDC70Q6NSX1 233 aa4.95□□□□□ -1.62
SCAF11-212ENST00000549162 LRRC69Q6ZNQ3 347 aa4.95□□□□□ -1.62
SCAF11-212ENST00000549162 GPRIN1Q7Z2K8 1008 aa4.95□□□□□ -1.62
SCAF11-212ENST00000549162 REC114Q7Z4M0 266 aa4.95□□□□□ -1.62
SCAF11-212ENST00000549162 CCDC13Q8IYE1 715 aa4.95□□□□□ -1.62
SCAF11-212ENST00000549162 CADM4Q8NFZ8 388 aa4.95□□□□□ -1.62
SCAF11-212ENST00000549162 SHKBP1Q8TBC3 707 aa4.95□□□□□ -1.62
SCAF11-212ENST00000549162 GATAD2BQ8WXI9 593 aa4.95□□□□□ -1.62
SCAF11-212ENST00000549162 SKA1Q96BD8 255 aa4.95□□□□□ -1.62
SCAF11-212ENST00000549162 CNDP1Q96KN2 507 aa4.95□□□□□ -1.62
SCAF11-212ENST00000549162 FAM96AQ9H5X1 160 aa4.95□□□□□ -1.62
SCAF11-212ENST00000549162 ANLNQ9NQW6 1124 aa4.95□□□□□ -1.62
SCAF11-212ENST00000549162 PIGVQ9NUD9 493 aa4.95□□□□□ -1.62
SCAF11-212ENST00000549162 GPRC5BQ9NZH0 403 aa4.95□□□□□ -1.62
SCAF11-212ENST00000549162 HPCAL4Q9UM19 191 aa4.95□□□□□ -1.62
SCAF11-212ENST00000549162 FAM50BQ9Y247 325 aa4.95□□□□□ -1.62
SCAF11-212ENST00000549162 OAS3Q9Y6K5 1087 aaKnown RBP4.95□□□□□ -1.62
SCAF11-212ENST00000549162 ZCWPW2A0A1B0GU75 182 aa4.95□□□□□ -1.62
SCAF11-212ENST00000549162 CAPN8A6NHC0 703 aa4.95□□□□□ -1.62
SCAF11-212ENST00000549162 STX16-NPEPL1H3BU86 382 aa4.95□□□□□ -1.62
SCAF11-212ENST00000549162 INO80B-WBP1J3KQ70 363 aa4.95□□□□□ -1.62
SCAF11-212ENST00000549162 HAX1O00165 279 aa4.95□□□□□ -1.62
SCAF11-212ENST00000549162 STX16O14662 325 aa4.95□□□□□ -1.62
SCAF11-212ENST00000549162 YKT6O15498 198 aa4.95□□□□□ -1.62
SCAF11-212ENST00000549162 ANXA9O76027 345 aa4.95□□□□□ -1.62
SCAF11-212ENST00000549162 IDEP14735 1019 aa4.95□□□□□ -1.62
SCAF11-212ENST00000549162 MSH3P20585 1137 aa4.95□□□□□ -1.62
SCAF11-212ENST00000549162 CNR2P34972 360 aa4.95□□□□□ -1.62
SCAF11-212ENST00000549162 HALP42357 657 aa4.95□□□□□ -1.62
SCAF11-212ENST00000549162 TSFMP43897 325 aaKnown RBP4.95□□□□□ -1.62
SCAF11-212ENST00000549162 ADKP55263 362 aaKnown RBP4.95□□□□□ -1.62
SCAF11-212ENST00000549162 TIAL1Q01085 375 aaKnown RBP eCLIP4.95□□□□□ -1.62
SCAF11-212ENST00000549162 MTF1Q14872 753 aa4.95□□□□□ -1.62
SCAF11-212ENST00000549162 TAF1AQ15573 450 aaPredicted RBP4.95□□□□□ -1.62
SCAF11-212ENST00000549162 TBCCQ15814 346 aa4.95□□□□□ -1.62
SCAF11-212ENST00000549162 ZNF423Q2M1K9 1284 aa4.95□□□□□ -1.62
SCAF11-212ENST00000549162 CPZQ66K79 652 aa4.95□□□□□ -1.62
SCAF11-212ENST00000549162 ERN2Q76MJ5 926 aaKnown RBP4.95□□□□□ -1.62
SCAF11-212ENST00000549162 CACNA2D4Q7Z3S7 1137 aa4.95□□□□□ -1.62
SCAF11-212ENST00000549162 TRMT11Q7Z4G4 463 aaKnown RBP4.95□□□□□ -1.62
SCAF11-212ENST00000549162 DNAAF5Q86Y56 855 aa4.95□□□□□ -1.62
SCAF11-212ENST00000549162 EGFL6Q8IUX8 553 aa4.95□□□□□ -1.62
SCAF11-212ENST00000549162 NELFCDQ8IXH7 590 aa4.95□□□□□ -1.62
SCAF11-212ENST00000549162 CNTD1Q8N815 330 aa4.95□□□□□ -1.62
SCAF11-212ENST00000549162 ZNF513Q8N8E2 541 aaPredicted RBP4.95□□□□□ -1.62
SCAF11-212ENST00000549162 AVL9Q8NBF6 648 aa4.95□□□□□ -1.62
SCAF11-212ENST00000549162 DNAJB8Q8NHS0 232 aa4.95□□□□□ -1.62
SCAF11-212ENST00000549162 JOSD2Q8TAC2 188 aa4.95□□□□□ -1.62
SCAF11-212ENST00000549162 RNF139Q8WU17 664 aa4.95□□□□□ -1.62
SCAF11-212ENST00000549162 DCAKDQ8WVC6 231 aa4.95□□□□□ -1.62
SCAF11-212ENST00000549162 RXFP2Q8WXD0 754 aa4.95□□□□□ -1.62
SCAF11-212ENST00000549162 CPT1BQ92523 772 aa4.95□□□□□ -1.62
SCAF11-212ENST00000549162 KISS1RQ969F8 398 aaPredicted RBP4.95□□□□□ -1.62
SCAF11-212ENST00000549162 GPR22Q99680 433 aa4.95□□□□□ -1.62
SCAF11-212ENST00000549162 DPYSL5Q9BPU6 564 aa4.95□□□□□ -1.62
SCAF11-212ENST00000549162 HERPUD2Q9BSE4 406 aa4.95□□□□□ -1.62
SCAF11-212ENST00000549162 FICDQ9BVA6 458 aa4.95□□□□□ -1.62
SCAF11-212ENST00000549162 CRISPLD1Q9H336 500 aa4.95□□□□□ -1.62
SCAF11-212ENST00000549162 DPEP3Q9H4B8 488 aa4.95□□□□□ -1.62
SCAF11-212ENST00000549162 LRRC4Q9HBW1 653 aa4.95□□□□□ -1.62
SCAF11-212ENST00000549162 MRPL17Q9NRX2 175 aaKnown RBP4.95□□□□□ -1.62
SCAF11-212ENST00000549162 NTMQ9P121 344 aa4.95□□□□□ -1.62
SCAF11-212ENST00000549162 EVLQ9UI08 416 aaPredicted RBP4.95□□□□□ -1.62
SCAF11-212ENST00000549162 GPR34Q9UPC5 381 aa4.95□□□□□ -1.62
SCAF11-212ENST00000549162 SAMM50Q9Y512 469 aa4.95□□□□□ -1.62
SCAF11-212ENST00000549162 APOL1O14791 398 aa4.95□□□□□ -1.62
SCAF11-212ENST00000549162 FOXD2O60548 495 aaPredicted RBP4.95□□□□□ -1.62
SCAF11-212ENST00000549162 HNRNPCL1O60812 293 aaKnown RBP4.95□□□□□ -1.62
SCAF11-212ENST00000549162 XYLBO75191 536 aa4.95□□□□□ -1.62
SCAF11-212ENST00000549162 IGF2P01344 180 aa4.95□□□□□ -1.62
SCAF11-212ENST00000549162 GHRP10912 638 aa4.95□□□□□ -1.62
SCAF11-212ENST00000549162 NCAM1P13591 858 aa4.95□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms