RNA–Protein interactions for RNA: ENST00000548938.5

HDAC7-228, Transcript of histone deacetylase 7, humanhuman

TSL 5

Gene HDAC7, Length 2,719 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-228ENST00000548938 FAM163BP0C2L3 166 aa13.85□□□□□ -0.19
HDAC7-228ENST00000548938 UGT1A6P19224 532 aa13.85□□□□□ -0.19
HDAC7-228ENST00000548938 ATP6V1B2P21281 511 aa13.85□□□□□ -0.19
HDAC7-228ENST00000548938 TKTP29401 623 aaKnown RBP13.85□□□□□ -0.19
HDAC7-228ENST00000548938 RPL34P49207 117 aaKnown RBP13.85□□□□□ -0.19
HDAC7-228ENST00000548938 SLC7A2P52569 658 aa13.85□□□□□ -0.19
HDAC7-228ENST00000548938 ESRRGP62508 458 aa13.85□□□□□ -0.19
HDAC7-228ENST00000548938 CTBP1Q13363 440 aa13.85□□□□□ -0.19
HDAC7-228ENST00000548938 SQLEQ14534 574 aa13.85□□□□□ -0.19
HDAC7-228ENST00000548938 KCTD21Q4G0X4 260 aa13.85□□□□□ -0.19
HDAC7-228ENST00000548938 PPP4R4Q6NUP7 873 aa13.85□□□□□ -0.19
HDAC7-228ENST00000548938 NT5DC4Q86YG4 428 aa13.85□□□□□ -0.19
HDAC7-228ENST00000548938 ANKFN1Q8N957 763 aa13.85□□□□□ -0.19
HDAC7-228ENST00000548938 RNF169Q8NCN4 708 aa13.85□□□□□ -0.19
HDAC7-228ENST00000548938 GIPC3Q8TF64 312 aa13.85□□□□□ -0.19
HDAC7-228ENST00000548938 DUS3LQ96G46 650 aaKnown RBP13.85□□□□□ -0.19
HDAC7-228ENST00000548938 EFHD1Q9BUP0 239 aa13.85□□□□□ -0.19
HDAC7-228ENST00000548938 SMARCAD1Q9H4L7 1026 aa13.85□□□□□ -0.19
HDAC7-228ENST00000548938 NCKIPSDQ9NZQ3 722 aa13.85□□□□□ -0.19
HDAC7-228ENST00000548938 LRRC37A2A6NM11 1700 aa13.85□□□□□ -0.19
HDAC7-228ENST00000548938 DLGAP1O14490 977 aa13.85□□□□□ -0.19
HDAC7-228ENST00000548938 SOCS7O14512 581 aa13.85□□□□□ -0.19
HDAC7-228ENST00000548938 NPHS1O60500 1241 aa13.85□□□□□ -0.19
HDAC7-228ENST00000548938 COQ9O75208 318 aa13.85□□□□□ -0.19
HDAC7-228ENST00000548938 ATE1O95260 518 aa13.85□□□□□ -0.19
HDAC7-228ENST00000548938 MT-CO1P00395 513 aa13.85□□□□□ -0.19
HDAC7-228ENST00000548938 INSRRP14616 1297 aa13.85□□□□□ -0.19
HDAC7-228ENST00000548938 GRIA3P42263 894 aa13.85□□□□□ -0.19
HDAC7-228ENST00000548938 CD97P48960 835 aa13.85□□□□□ -0.19
HDAC7-228ENST00000548938 NPY2RP49146 381 aa13.85□□□□□ -0.19
HDAC7-228ENST00000548938 RAB10P61026 200 aa13.85□□□□□ -0.19
HDAC7-228ENST00000548938 ZBED5Q49AG3 693 aa13.85□□□□□ -0.19
HDAC7-228ENST00000548938 ZNF618Q5T7W0 954 aa13.85□□□□□ -0.19
HDAC7-228ENST00000548938 SYPL2Q5VXT5 272 aa13.85□□□□□ -0.19
HDAC7-228ENST00000548938 ZNF280DQ6N043 979 aa13.85□□□□□ -0.19
HDAC7-228ENST00000548938 TTC33Q6PID6 262 aaPredicted RBP13.85□□□□□ -0.19
HDAC7-228ENST00000548938 ANKRD23Q86SG2 305 aa13.85□□□□□ -0.19
HDAC7-228ENST00000548938 UNC93AQ86WB7 457 aa13.85□□□□□ -0.19
HDAC7-228ENST00000548938 CBR4Q8N4T8 237 aa13.85□□□□□ -0.19
HDAC7-228ENST00000548938 FTHL17Q9BXU8 183 aa13.85□□□□□ -0.19
HDAC7-228ENST00000548938 MRPL46Q9H2W6 279 aaKnown RBP13.85□□□□□ -0.19
HDAC7-228ENST00000548938 CYP4F12Q9HCS2 524 aa13.85□□□□□ -0.19
HDAC7-228ENST00000548938 PCDHGA4Q9Y5G9 962 aa13.85□□□□□ -0.19
HDAC7-228ENST00000548938 A0A087WXM4 84 aa13.84□□□□□ -0.19
HDAC7-228ENST00000548938 FAM95CA0A1B0GW59 222 aa13.84□□□□□ -0.19
HDAC7-228ENST00000548938 MAGEB16A2A368 324 aa13.84□□□□□ -0.19
HDAC7-228ENST00000548938 I6L893 689 aaPredicted RBP13.84□□□□□ -0.19
HDAC7-228ENST00000548938 UBDO15205 165 aa13.84□□□□□ -0.19
HDAC7-228ENST00000548938 DAB1O75553 588 aa13.84□□□□□ -0.19
HDAC7-228ENST00000548938 SRP72O76094 671 aaKnown RBP13.84□□□□□ -0.19
HDAC7-228ENST00000548938 SEC24DO94855 1032 aaPredicted RBP13.84□□□□□ -0.19
HDAC7-228ENST00000548938 LRPAP1P30533 357 aa13.84□□□□□ -0.19
HDAC7-228ENST00000548938 MAPRE2Q15555 327 aa13.84□□□□□ -0.19
HDAC7-228ENST00000548938 PIWIL4Q7Z3Z4 852 aaKnown RBP13.84□□□□□ -0.19
HDAC7-228ENST00000548938 PIGZQ86VD9 579 aa13.84□□□□□ -0.19
HDAC7-228ENST00000548938 DHFR2Q86XF0 187 aa13.84□□□□□ -0.19
HDAC7-228ENST00000548938 EPHX4Q8IUS5 362 aa13.84□□□□□ -0.19
HDAC7-228ENST00000548938 ZBTB8BQ8NAP8 495 aaPredicted RBP13.84□□□□□ -0.19
HDAC7-228ENST00000548938 NPY6RQ99463 290 aa13.84□□□□□ -0.19
HDAC7-228ENST00000548938 TMEM181Q9P2C4 612 aa13.84□□□□□ -0.19
HDAC7-228ENST00000548938 GJD2Q9UKL4 321 aa13.84□□□□□ -0.19
HDAC7-228ENST00000548938 TANC1Q9C0D5 1861 aa13.84□□□□□ -0.19
HDAC7-228ENST00000548938 FAM149AA5PLN7 773 aa13.84□□□□□ -0.19
HDAC7-228ENST00000548938 TRIM64CA6NLI5 447 aa13.84□□□□□ -0.19
HDAC7-228ENST00000548938 ERI2A8K979 691 aaKnown RBP13.84□□□□□ -0.19
HDAC7-228ENST00000548938 COL6A2P12110 1019 aa13.84□□□□□ -0.19
HDAC7-228ENST00000548938 KCNA5P22460 613 aa13.84□□□□□ -0.19
HDAC7-228ENST00000548938 ETFBP38117 255 aa13.84□□□□□ -0.19
HDAC7-228ENST00000548938 ACADSBP45954 432 aa13.84□□□□□ -0.19
HDAC7-228ENST00000548938 PSMD7P51665 324 aa13.84□□□□□ -0.19
HDAC7-228ENST00000548938 KYAT1Q16773 422 aa13.84□□□□□ -0.19
HDAC7-228ENST00000548938 SLC44A4Q53GD3 710 aa13.84□□□□□ -0.19
HDAC7-228ENST00000548938 SAMD4BQ5PRF9 694 aaKnown RBP13.84□□□□□ -0.19
HDAC7-228ENST00000548938 ERMP1Q7Z2K6 904 aa13.84□□□□□ -0.19
HDAC7-228ENST00000548938 LYSMD3Q7Z3D4 306 aa13.84□□□□□ -0.19
HDAC7-228ENST00000548938 TCF12Q99081 682 aa13.84□□□□□ -0.19
HDAC7-228ENST00000548938 LRRC4Q9HBW1 653 aa13.84□□□□□ -0.19
HDAC7-228ENST00000548938 CROTQ9UKG9 612 aa13.84□□□□□ -0.19
HDAC7-228ENST00000548938 DNAJC25-GNG10A0A024R161 153 aa13.84□□□□□ -0.19
HDAC7-228ENST00000548938 SNRPB2P08579 225 aaKnown RBP13.84□□□□□ -0.19
HDAC7-228ENST00000548938 BMP2P12643 396 aa13.84□□□□□ -0.19
HDAC7-228ENST00000548938 STMN1P16949 149 aa13.84□□□□□ -0.19
HDAC7-228ENST00000548938 NDUFV1P49821 464 aa13.84□□□□□ -0.19
HDAC7-228ENST00000548938 GJA9P57773 515 aa13.84□□□□□ -0.19
HDAC7-228ENST00000548938 HFE2Q6ZVN8 426 aa13.84□□□□□ -0.19
HDAC7-228ENST00000548938 OR2T34Q8NGX1 318 aa13.84□□□□□ -0.19
HDAC7-228ENST00000548938 OR2T3Q8NH03 318 aa13.84□□□□□ -0.19
HDAC7-228ENST00000548938 HEXDCQ8WVB3 486 aa13.84□□□□□ -0.19
HDAC7-228ENST00000548938 HSFY1Q96LI6 401 aa13.84□□□□□ -0.19
HDAC7-228ENST00000548938 NSMCE4AQ9NXX6 385 aa13.84□□□□□ -0.19
HDAC7-228ENST00000548938 SNTG2Q9NY99 539 aa13.84□□□□□ -0.19
HDAC7-228ENST00000548938 NRP1O14786 923 aa13.83□□□□□ -0.2
HDAC7-228ENST00000548938 TPST1O60507 370 aa13.83□□□□□ -0.2
HDAC7-228ENST00000548938 CLIC3O95833 236 aa13.83□□□□□ -0.2
HDAC7-228ENST00000548938 CYP2C9P11712 490 aa13.83□□□□□ -0.2
HDAC7-228ENST00000548938 NOS2P35228 1153 aa13.83□□□□□ -0.2
HDAC7-228ENST00000548938 SLC26A2P50443 739 aa13.83□□□□□ -0.2
HDAC7-228ENST00000548938 CCR3P51677 355 aa13.83□□□□□ -0.2
HDAC7-228ENST00000548938 TAS2R39P59534 338 aa13.83□□□□□ -0.2
HDAC7-228ENST00000548938 TPI1P60174 286 aa13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms