RNA–Protein interactions for RNA: ENST00000547018.5

SCAF11-209, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 5

Gene SCAF11, Length 3,271 nt, Biotype non stop decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-209ENST00000547018 CATSPER2Q96P56 530 aa12.84□□□□□ -0.35
SCAF11-209ENST00000547018 SLC22A12Q96S37 553 aa12.84□□□□□ -0.35
SCAF11-209ENST00000547018 BTBD10Q9BSF8 475 aa12.84□□□□□ -0.35
SCAF11-209ENST00000547018 SMG9Q9H0W8 520 aaKnown RBP12.84□□□□□ -0.35
SCAF11-209ENST00000547018 ALG9Q9H6U8 611 aa12.84□□□□□ -0.35
SCAF11-209ENST00000547018 ATP13A1Q9HD20 1204 aa12.84□□□□□ -0.35
SCAF11-209ENST00000547018 TCAF1Q9Y4C2 921 aa12.84□□□□□ -0.35
SCAF11-209ENST00000547018 SPECC1L-ADORA2AF8WAN1 911 aa12.84□□□□□ -0.35
SCAF11-209ENST00000547018 TRIM13O60858 407 aa12.84□□□□□ -0.35
SCAF11-209ENST00000547018 JUNP05412 331 aaKnown RBP12.84□□□□□ -0.35
SCAF11-209ENST00000547018 SLC2A3P11169 496 aa12.84□□□□□ -0.35
SCAF11-209ENST00000547018 CNTFP26441 200 aa12.84□□□□□ -0.35
SCAF11-209ENST00000547018 CORO1AP31146 461 aaKnown RBP12.84□□□□□ -0.35
SCAF11-209ENST00000547018 GKP32189 559 aa12.84□□□□□ -0.35
SCAF11-209ENST00000547018 CCNFP41002 786 aa12.84□□□□□ -0.35
SCAF11-209ENST00000547018 ABL2P42684 1182 aa12.84□□□□□ -0.35
SCAF11-209ENST00000547018 RGRP47804 291 aa12.84□□□□□ -0.35
SCAF11-209ENST00000547018 SIRPB2Q5JXA9 342 aa12.84□□□□□ -0.35
SCAF11-209ENST00000547018 TCHHL1Q5QJ38 904 aaPredicted RBP12.84□□□□□ -0.35
SCAF11-209ENST00000547018 TXNDC8Q6A555 127 aa12.84□□□□□ -0.35
SCAF11-209ENST00000547018 LPCAT1Q8NF37 534 aa12.84□□□□□ -0.35
SCAF11-209ENST00000547018 FCRL5Q96RD9 977 aa12.84□□□□□ -0.35
SCAF11-209ENST00000547018 RNF38Q9H0F5 515 aa12.84□□□□□ -0.35
SCAF11-209ENST00000547018 TLR9Q9NR96 1032 aa12.84□□□□□ -0.35
SCAF11-209ENST00000547018 NEU3Q9UQ49 428 aa12.84□□□□□ -0.35
SCAF11-209ENST00000547018 SDK1Q7Z5N4 2213 aa12.84□□□□□ -0.35
SCAF11-209ENST00000547018 C9JVG2 144 aa12.84□□□□□ -0.35
SCAF11-209ENST00000547018 GSC2O15499 205 aa12.84□□□□□ -0.35
SCAF11-209ENST00000547018 IGLV3-25P01717 112 aa12.84□□□□□ -0.35
SCAF11-209ENST00000547018 MBL2P11226 248 aaPredicted RBP12.84□□□□□ -0.35
SCAF11-209ENST00000547018 ARNTP27540 789 aa12.84□□□□□ -0.35
SCAF11-209ENST00000547018 CD151P48509 253 aa12.84□□□□□ -0.35
SCAF11-209ENST00000547018 NSUN2Q08J23 767 aaKnown RBP eCLIP12.84□□□□□ -0.35
SCAF11-209ENST00000547018 GPR17Q13304 367 aa12.84□□□□□ -0.35
SCAF11-209ENST00000547018 NAA25Q14CX7 972 aa12.84□□□□□ -0.35
SCAF11-209ENST00000547018 RCN1Q15293 331 aa12.84□□□□□ -0.35
SCAF11-209ENST00000547018 TIGD7Q6NT04 549 aaPredicted RBP12.84□□□□□ -0.35
SCAF11-209ENST00000547018 ISLR2Q6UXK2 745 aa12.84□□□□□ -0.35
SCAF11-209ENST00000547018 TMC7Q7Z402 723 aa12.84□□□□□ -0.35
SCAF11-209ENST00000547018 LZTR1Q8N653 840 aa12.84□□□□□ -0.35
SCAF11-209ENST00000547018 HEXDCQ8WVB3 486 aa12.84□□□□□ -0.35
SCAF11-209ENST00000547018 IL12RB2Q99665 862 aa12.84□□□□□ -0.35
SCAF11-209ENST00000547018 LRMDAQ9H2I8 198 aa12.84□□□□□ -0.35
SCAF11-209ENST00000547018 ERI2A8K979 691 aaKnown RBP12.83□□□□□ -0.36
SCAF11-209ENST00000547018 VNN2O95498 520 aa12.83□□□□□ -0.36
SCAF11-209ENST00000547018 PDHA1P08559 390 aa12.83□□□□□ -0.36
SCAF11-209ENST00000547018 CTPS1P17812 591 aa12.83□□□□□ -0.36
SCAF11-209ENST00000547018 ITGB6P18564 788 aa12.83□□□□□ -0.36
SCAF11-209ENST00000547018 BTG3Q14201 252 aaPredicted RBP12.83□□□□□ -0.36
SCAF11-209ENST00000547018 LBRQ14739 615 aaKnown RBP12.83□□□□□ -0.36
SCAF11-209ENST00000547018 CTC1Q2NKJ3 1217 aa12.83□□□□□ -0.36
SCAF11-209ENST00000547018 GPR158Q5T848 1215 aa12.83□□□□□ -0.36
SCAF11-209ENST00000547018 C1orf146Q5VVC0 180 aa12.83□□□□□ -0.36
SCAF11-209ENST00000547018 FAM126BQ8IXS8 530 aa12.83□□□□□ -0.36
SCAF11-209ENST00000547018 GIMAP7Q8NHV1 300 aa12.83□□□□□ -0.36
SCAF11-209ENST00000547018 SREK1Q8WXA9 508 aaKnown RBP12.83□□□□□ -0.36
SCAF11-209ENST00000547018 SKA1Q96BD8 255 aa12.83□□□□□ -0.36
SCAF11-209ENST00000547018 BEGAINQ9BUH8 593 aa12.83□□□□□ -0.36
SCAF11-209ENST00000547018 RHOJQ9H4E5 214 aa12.83□□□□□ -0.36
SCAF11-209ENST00000547018 ENTPD7Q9NQZ7 604 aa12.83□□□□□ -0.36
SCAF11-209ENST00000547018 TMEM39AQ9NV64 488 aa12.83□□□□□ -0.36
SCAF11-209ENST00000547018 FAM8A1Q9UBU6 413 aa12.83□□□□□ -0.36
SCAF11-209ENST00000547018 MYOFQ9NZM1 2061 aa12.83□□□□□ -0.36
SCAF11-209ENST00000547018 FAM163BP0C2L3 166 aa12.83□□□□□ -0.36
SCAF11-209ENST00000547018 SLC35E2BP0CK96 405 aa12.83□□□□□ -0.36
SCAF11-209ENST00000547018 PAMP19021 973 aa12.83□□□□□ -0.36
SCAF11-209ENST00000547018 ALDH1A3P47895 512 aa12.83□□□□□ -0.36
SCAF11-209ENST00000547018 IDH3AP50213 366 aa12.83□□□□□ -0.36
SCAF11-209ENST00000547018 DLG1Q12959 904 aa12.83□□□□□ -0.36
SCAF11-209ENST00000547018 PPM1LQ5SGD2 360 aa12.83□□□□□ -0.36
SCAF11-209ENST00000547018 LAYNQ6UX15 382 aa12.83□□□□□ -0.36
SCAF11-209ENST00000547018 ARL14EPQ8N8R7 260 aaPredicted RBP12.83□□□□□ -0.36
SCAF11-209ENST00000547018 KCNK4Q9NYG8 393 aa12.83□□□□□ -0.36
SCAF11-209ENST00000547018 H0Y626 953 aa12.82□□□□□ -0.36
SCAF11-209ENST00000547018 SYN3O14994 580 aa12.82□□□□□ -0.36
SCAF11-209ENST00000547018 COCHO43405 550 aa12.82□□□□□ -0.36
SCAF11-209ENST00000547018 KLKB1P03952 638 aa12.82□□□□□ -0.36
SCAF11-209ENST00000547018 CKMP06732 381 aa12.82□□□□□ -0.36
SCAF11-209ENST00000547018 RHOQP17081 205 aa12.82□□□□□ -0.36
SCAF11-209ENST00000547018 ATXN7L2Q5T6C5 722 aaPredicted RBP12.82□□□□□ -0.36
SCAF11-209ENST00000547018 SNX30Q5VWJ9 437 aa12.82□□□□□ -0.36
SCAF11-209ENST00000547018 MAVSQ7Z434 540 aa12.82□□□□□ -0.36
SCAF11-209ENST00000547018 MYLIPQ8WY64 445 aa12.82□□□□□ -0.36
SCAF11-209ENST00000547018 C8orf48Q96LL4 319 aa12.82□□□□□ -0.36
SCAF11-209ENST00000547018 C7orf26Q96N11 449 aa12.82□□□□□ -0.36
SCAF11-209ENST00000547018 SORT1Q99523 831 aa12.82□□□□□ -0.36
SCAF11-209ENST00000547018 OLFM1Q99784 485 aa12.82□□□□□ -0.36
SCAF11-209ENST00000547018 POMKQ9H5K3 350 aa12.82□□□□□ -0.36
SCAF11-209ENST00000547018 TLE6Q9H808 572 aa12.82□□□□□ -0.36
SCAF11-209ENST00000547018 SCN5AQ14524 2016 aa12.82□□□□□ -0.36
SCAF11-209ENST00000547018 CASP8AP2Q9UKL3 1982 aa12.82□□□□□ -0.36
SCAF11-209ENST00000547018 MAGEB16A2A368 324 aa12.82□□□□□ -0.36
SCAF11-209ENST00000547018 LRRC14BA6NHZ5 514 aa12.82□□□□□ -0.36
SCAF11-209ENST00000547018 SIN3BO75182 1162 aa12.82□□□□□ -0.36
SCAF11-209ENST00000547018 RHOCP08134 193 aa12.82□□□□□ -0.36
SCAF11-209ENST00000547018 KCNA5P22460 613 aa12.82□□□□□ -0.36
SCAF11-209ENST00000547018 WEE1P30291 646 aa12.82□□□□□ -0.36
SCAF11-209ENST00000547018 CDKN1CP49918 316 aaPredicted RBP12.82□□□□□ -0.36
SCAF11-209ENST00000547018 DEFB103AP81534 67 aa12.82□□□□□ -0.36
SCAF11-209ENST00000547018 SMAD3P84022 425 aaKnown RBP12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 72.8 ms