RNA–Protein interactions for RNA: ENST00000546816.5

CCDC38-204, Transcript of coiled-coil domain containing 38, humanhuman

TSL 2

Gene CCDC38, Length 465 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-204ENST00000546816 PLEKHO1Q53GL0 409 aaPredicted RBP4.28□□□□□ -1.72
CCDC38-204ENST00000546816 XKR9Q5GH70 373 aa4.28□□□□□ -1.72
CCDC38-204ENST00000546816 FAM69BQ5VUD6 431 aa4.28□□□□□ -1.72
CCDC38-204ENST00000546816 ADAM5Q6NVV9 412 aa4.28□□□□□ -1.72
CCDC38-204ENST00000546816 RHBDF2Q6PJF5 856 aa4.28□□□□□ -1.72
CCDC38-204ENST00000546816 SMIM29Q86T20 159 aa4.28□□□□□ -1.72
CCDC38-204ENST00000546816 MON1AQ86VX9 555 aa4.28□□□□□ -1.72
CCDC38-204ENST00000546816 TRIB2Q92519 343 aa4.28□□□□□ -1.72
CCDC38-204ENST00000546816 RILPL2Q969X0 211 aa4.28□□□□□ -1.72
CCDC38-204ENST00000546816 SCMH1Q96GD3 660 aa4.28□□□□□ -1.72
CCDC38-204ENST00000546816 YME1L1Q96TA2 773 aa4.28□□□□□ -1.72
CCDC38-204ENST00000546816 KIF17Q9P2E2 1029 aa4.28□□□□□ -1.72
CCDC38-204ENST00000546816 DERAQ9Y315 318 aa4.28□□□□□ -1.72
CCDC38-204ENST00000546816 CH25HO95992 272 aa4.27□□□□□ -1.73
CCDC38-204ENST00000546816 HMGB1P09429 215 aaKnown RBP4.27□□□□□ -1.73
CCDC38-204ENST00000546816 RPL3P39023 403 aaKnown RBP4.27□□□□□ -1.73
CCDC38-204ENST00000546816 ACSM2AQ08AH3 577 aa4.27□□□□□ -1.73
CCDC38-204ENST00000546816 SNTA1Q13424 505 aa4.27□□□□□ -1.73
CCDC38-204ENST00000546816 DHX34Q14147 1143 aaKnown RBP4.27□□□□□ -1.73
CCDC38-204ENST00000546816 SLC18A3Q16572 532 aa4.27□□□□□ -1.73
CCDC38-204ENST00000546816 DCAF6Q58WW2 860 aa4.27□□□□□ -1.73
CCDC38-204ENST00000546816 CCDC129Q6ZRS4 1044 aa4.27□□□□□ -1.73
CCDC38-204ENST00000546816 MOGAT3Q86VF5 341 aa4.27□□□□□ -1.73
CCDC38-204ENST00000546816 MB21D2Q8IYB1 491 aaPredicted RBP4.27□□□□□ -1.73
CCDC38-204ENST00000546816 GHDCQ8N2G8 530 aa4.27□□□□□ -1.73
CCDC38-204ENST00000546816 RFWD2Q8NHY2 731 aa4.27□□□□□ -1.73
CCDC38-204ENST00000546816 SPATA20Q8TB22 786 aa4.27□□□□□ -1.73
CCDC38-204ENST00000546816 TMEM170AQ8WVE7 144 aa4.27□□□□□ -1.73
CCDC38-204ENST00000546816 RNF183Q96D59 192 aa4.27□□□□□ -1.73
CCDC38-204ENST00000546816 CLSTN3Q9BQT9 956 aa4.27□□□□□ -1.73
CCDC38-204ENST00000546816 TTC12Q9H892 705 aaPredicted RBP4.27□□□□□ -1.73
CCDC38-204ENST00000546816 CNPY2Q9Y2B0 182 aa4.27□□□□□ -1.73
CCDC38-204ENST00000546816 NFS1Q9Y697 457 aa4.27□□□□□ -1.73
CCDC38-204ENST00000546816 SAA2-SAA4A0A096LPE2 208 aa4.26□□□□□ -1.73
CCDC38-204ENST00000546816 MAGEA13PA6NCF6 341 aa4.26□□□□□ -1.73
CCDC38-204ENST00000546816 TULP2O00295 520 aa4.26□□□□□ -1.73
CCDC38-204ENST00000546816 SERPINB2P05120 415 aa4.26□□□□□ -1.73
CCDC38-204ENST00000546816 SSTR2P30874 369 aa4.26□□□□□ -1.73
CCDC38-204ENST00000546816 CHKAP35790 457 aa4.26□□□□□ -1.73
CCDC38-204ENST00000546816 DENND1BQ6P3S1 775 aa4.26□□□□□ -1.73
CCDC38-204ENST00000546816 DCUN1D3Q8IWE4 304 aa4.26□□□□□ -1.73
CCDC38-204ENST00000546816 DENND6AQ8IWF6 608 aa4.26□□□□□ -1.73
CCDC38-204ENST00000546816 SAMD3Q8N6K7 520 aa4.26□□□□□ -1.73
CCDC38-204ENST00000546816 AFG1LQ8WV93 481 aa4.26□□□□□ -1.73
CCDC38-204ENST00000546816 TRAPPC12Q8WVT3 735 aa4.26□□□□□ -1.73
CCDC38-204ENST00000546816 HSPH1Q92598 858 aa4.26□□□□□ -1.73
CCDC38-204ENST00000546816 BICD1Q96G01 975 aa4.26□□□□□ -1.73
CCDC38-204ENST00000546816 LTV1Q96GA3 475 aaPredicted RBP4.26□□□□□ -1.73
CCDC38-204ENST00000546816 IL17FQ96PD4 163 aa4.26□□□□□ -1.73
CCDC38-204ENST00000546816 ANKRD10Q9NXR5 420 aa4.26□□□□□ -1.73
CCDC38-204ENST00000546816 OR6C3Q9NZP0 311 aa4.26□□□□□ -1.73
CCDC38-204ENST00000546816 MALT1Q9UDY8 824 aa4.26□□□□□ -1.73
CCDC38-204ENST00000546816 DNAJC16Q9Y2G8 782 aa4.26□□□□□ -1.73
CCDC38-204ENST00000546816 ADGRF5Q8IZF2 1346 aa4.25□□□□□ -1.73
CCDC38-204ENST00000546816 PRAC2D3DTV9 90 aa4.25□□□□□ -1.73
CCDC38-204ENST00000546816 IGHV4-30-4P0DP06 118 aa4.25□□□□□ -1.73
CCDC38-204ENST00000546816 LIFRP42702 1097 aa4.25□□□□□ -1.73
CCDC38-204ENST00000546816 ACTR2P61160 394 aa4.25□□□□□ -1.73
CCDC38-204ENST00000546816 ARL16Q0P5N6 197 aa4.25□□□□□ -1.73
CCDC38-204ENST00000546816 KRT72Q14CN4 511 aa4.25□□□□□ -1.73
CCDC38-204ENST00000546816 BRD3Q15059 726 aa4.25□□□□□ -1.73
CCDC38-204ENST00000546816 CTXN3Q4LDR2 81 aa4.25□□□□□ -1.73
CCDC38-204ENST00000546816 MYCT1Q8N699 235 aa4.25□□□□□ -1.73
CCDC38-204ENST00000546816 DNAAF1Q8NEP3 725 aa4.25□□□□□ -1.73
CCDC38-204ENST00000546816 ARRDC2Q8TBH0 407 aa4.25□□□□□ -1.73
CCDC38-204ENST00000546816 SNED1Q8TER0 1413 aa4.25□□□□□ -1.73
CCDC38-204ENST00000546816 LRFN5Q96NI6 719 aa4.25□□□□□ -1.73
CCDC38-204ENST00000546816 C1QTNF5Q9BXJ0 243 aa4.25□□□□□ -1.73
CCDC38-204ENST00000546816 ENTPD7Q9NQZ7 604 aa4.25□□□□□ -1.73
CCDC38-204ENST00000546816 SPATS2LQ9NUQ6 558 aaKnown RBP4.25□□□□□ -1.73
CCDC38-204ENST00000546816 FEM1BQ9UK73 627 aa4.25□□□□□ -1.73
CCDC38-204ENST00000546816 RIPOR2Q9Y4F9 1068 aa4.25□□□□□ -1.73
CCDC38-204ENST00000546816 CCDC194A0A1B0GVG4 234 aa4.24□□□□□ -1.73
CCDC38-204ENST00000546816 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP4.24□□□□□ -1.73
CCDC38-204ENST00000546816 CPED1A4D0V7 1026 aa4.24□□□□□ -1.73
CCDC38-204ENST00000546816 DHRS4L1P0CG22 281 aa4.24□□□□□ -1.73
CCDC38-204ENST00000546816 RYKP34925 604 aa4.24□□□□□ -1.73
CCDC38-204ENST00000546816 PEX5P50542 639 aa4.24□□□□□ -1.73
CCDC38-204ENST00000546816 CRIP2P52943 208 aaPredicted RBP4.24□□□□□ -1.73
CCDC38-204ENST00000546816 GOLGA8FQ08AF8 430 aa4.24□□□□□ -1.73
CCDC38-204ENST00000546816 PRKG1Q13976 671 aa4.24□□□□□ -1.73
CCDC38-204ENST00000546816 KLHL24Q6TFL4 600 aa4.24□□□□□ -1.73
CCDC38-204ENST00000546816 PRSS45Q7RTY3 260 aa4.24□□□□□ -1.73
CCDC38-204ENST00000546816 HERC6Q8IVU3 1022 aa4.24□□□□□ -1.73
CCDC38-204ENST00000546816 SUGP1Q8IWZ8 645 aaKnown RBP4.24□□□□□ -1.73
CCDC38-204ENST00000546816 CCDC105Q8IYK2 499 aa4.24□□□□□ -1.73
CCDC38-204ENST00000546816 NAGSQ8N159 534 aa4.24□□□□□ -1.73
CCDC38-204ENST00000546816 TMEM57Q8N5G2 664 aa4.24□□□□□ -1.73
CCDC38-204ENST00000546816 ANKRD44Q8N8A2 993 aa4.24□□□□□ -1.73
CCDC38-204ENST00000546816 SORCS1Q8WY21 1168 aa4.24□□□□□ -1.73
CCDC38-204ENST00000546816 MPHOSPH6Q99547 160 aaKnown RBP4.24□□□□□ -1.73
CCDC38-204ENST00000546816 PAGR1Q9BTK6 254 aa4.24□□□□□ -1.73
CCDC38-204ENST00000546816 LMAN2LQ9H0V9 348 aa4.24□□□□□ -1.73
CCDC38-204ENST00000546816 NDRG3Q9UGV2 375 aa4.24□□□□□ -1.73
CCDC38-204ENST00000546816 A0A1B0GVY2 172 aa4.23□□□□□ -1.73
CCDC38-204ENST00000546816 FAM90A7PA6NKC0 464 aa4.23□□□□□ -1.73
CCDC38-204ENST00000546816 FAM90A22PA8MWA6 464 aa4.23□□□□□ -1.73
CCDC38-204ENST00000546816 FAM90A12PA8MX19 464 aa4.23□□□□□ -1.73
CCDC38-204ENST00000546816 FAM90A23PA8MXZ1 464 aa4.23□□□□□ -1.73
CCDC38-204ENST00000546816 EBAG9O00559 213 aa4.23□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms