RNA–Protein interactions for RNA: ENST00000546810.1

RAB5B-203, Transcript of RAB5B, member RAS oncogene family, humanhuman

TSL 2

Gene RAB5B, Length 589 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5B-203ENST00000546810 NT5DC3Q86UY8 548 aa13.62□□□□□ -0.23
RAB5B-203ENST00000546810 RFX6Q8HWS3 928 aa13.62□□□□□ -0.23
RAB5B-203ENST00000546810 CCDC50Q8IVM0 306 aa13.62□□□□□ -0.23
RAB5B-203ENST00000546810 SPACA3Q8IXA5 215 aa13.62□□□□□ -0.23
RAB5B-203ENST00000546810 ATP11CQ8NB49 1132 aa13.62□□□□□ -0.23
RAB5B-203ENST00000546810 TRIM58Q8NG06 486 aa13.62□□□□□ -0.23
RAB5B-203ENST00000546810 EXD1Q8NHP7 514 aa13.62□□□□□ -0.23
RAB5B-203ENST00000546810 PRCCQ92733 491 aaPredicted RBP13.62□□□□□ -0.23
RAB5B-203ENST00000546810 RNF25Q96BH1 459 aaPredicted RBP13.62□□□□□ -0.23
RAB5B-203ENST00000546810 FAF2Q96CS3 445 aa13.62□□□□□ -0.23
RAB5B-203ENST00000546810 HMCESQ96FZ2 354 aa13.62□□□□□ -0.23
RAB5B-203ENST00000546810 RPL10LQ96L21 214 aaKnown RBP13.62□□□□□ -0.23
RAB5B-203ENST00000546810 CCDC114Q96M63 670 aa13.62□□□□□ -0.23
RAB5B-203ENST00000546810 RNF157Q96PX1 679 aa13.62□□□□□ -0.23
RAB5B-203ENST00000546810 PCED1AQ9H1Q7 454 aa13.62□□□□□ -0.23
RAB5B-203ENST00000546810 TMEM245Q9H330 911 aa13.62□□□□□ -0.23
RAB5B-203ENST00000546810 LRRC19Q9H756 370 aa13.62□□□□□ -0.23
RAB5B-203ENST00000546810 FBRSQ9HAH7 460 aa13.62□□□□□ -0.23
RAB5B-203ENST00000546810 SPTA1P02549 2419 aa13.62□□□□□ -0.23
RAB5B-203ENST00000546810 EDDM13A0A1B0GTR0 161 aa13.61□□□□□ -0.23
RAB5B-203ENST00000546810 TARSL2A2RTX5 802 aaKnown RBP13.61□□□□□ -0.23
RAB5B-203ENST00000546810 GOLGA6L9A6NEM1 432 aa13.61□□□□□ -0.23
RAB5B-203ENST00000546810 DFFAO00273 331 aa13.61□□□□□ -0.23
RAB5B-203ENST00000546810 ENC1O14682 589 aa13.61□□□□□ -0.23
RAB5B-203ENST00000546810 APOL1O14791 398 aa13.61□□□□□ -0.23
RAB5B-203ENST00000546810 SNAP91O60641 907 aa13.61□□□□□ -0.23
RAB5B-203ENST00000546810 RFPL3O75679 317 aa13.61□□□□□ -0.23
RAB5B-203ENST00000546810 FTCDO95954 541 aa13.61□□□□□ -0.23
RAB5B-203ENST00000546810 MSNP26038 577 aaKnown RBP13.61□□□□□ -0.23
RAB5B-203ENST00000546810 ACVRL1P37023 503 aa13.61□□□□□ -0.23
RAB5B-203ENST00000546810 GRIA4P48058 902 aa13.61□□□□□ -0.23
RAB5B-203ENST00000546810 NUMBP49757 651 aa13.61□□□□□ -0.23
RAB5B-203ENST00000546810 COPS2P61201 443 aa13.61□□□□□ -0.23
RAB5B-203ENST00000546810 IL9RQ01113 521 aa13.61□□□□□ -0.23
RAB5B-203ENST00000546810 SERINC3Q13530 473 aa13.61□□□□□ -0.23
RAB5B-203ENST00000546810 TFDP2Q14188 446 aa13.61□□□□□ -0.23
RAB5B-203ENST00000546810 HNRNPA1L2Q32P51 320 aaKnown RBP13.61□□□□□ -0.23
RAB5B-203ENST00000546810 HES3Q5TGS1 186 aa13.61□□□□□ -0.23
RAB5B-203ENST00000546810 LRRC49Q8IUZ0 686 aa13.61□□□□□ -0.23
RAB5B-203ENST00000546810 PCDH19Q8TAB3 1148 aa13.61□□□□□ -0.23
RAB5B-203ENST00000546810 CASKIN2Q8WXE0 1202 aa13.61□□□□□ -0.23
RAB5B-203ENST00000546810 CELF6Q96J87 481 aaKnown RBP13.61□□□□□ -0.23
RAB5B-203ENST00000546810 MRGPRX3Q96LB0 322 aa13.61□□□□□ -0.23
RAB5B-203ENST00000546810 SEMA4CQ9C0C4 833 aa13.61□□□□□ -0.23
RAB5B-203ENST00000546810 SLC39A8Q9C0K1 460 aa13.61□□□□□ -0.23
RAB5B-203ENST00000546810 SP110Q9HB58 689 aa13.61□□□□□ -0.23
RAB5B-203ENST00000546810 TM9SF3Q9HD45 589 aa13.61□□□□□ -0.23
RAB5B-203ENST00000546810 HS3ST2Q9Y278 367 aa13.61□□□□□ -0.23
RAB5B-203ENST00000546810 FARP1Q9Y4F1 1045 aaPredicted RBP13.61□□□□□ -0.23
RAB5B-203ENST00000546810 CAPN6Q9Y6Q1 641 aa13.61□□□□□ -0.23
RAB5B-203ENST00000546810 KNTC1P50748 2209 aa13.61□□□□□ -0.23
RAB5B-203ENST00000546810 ATP9BO43861 1147 aa13.6□□□□□ -0.23
RAB5B-203ENST00000546810 BRINP1O60477 761 aa13.6□□□□□ -0.23
RAB5B-203ENST00000546810 RNASEH1O60930 286 aaKnown RBP13.6□□□□□ -0.23
RAB5B-203ENST00000546810 ZMPSTE24O75844 475 aa13.6□□□□□ -0.23
RAB5B-203ENST00000546810 C1SP09871 688 aa13.6□□□□□ -0.23
RAB5B-203ENST00000546810 SRCP12931 536 aa13.6□□□□□ -0.23
RAB5B-203ENST00000546810 C6P13671 934 aa13.6□□□□□ -0.23
RAB5B-203ENST00000546810 MX2P20592 715 aa13.6□□□□□ -0.23
RAB5B-203ENST00000546810 PRKCHP24723 683 aa13.6□□□□□ -0.23
RAB5B-203ENST00000546810 ACTN2P35609 894 aa13.6□□□□□ -0.23
RAB5B-203ENST00000546810 RECQLP46063 649 aaPredicted RBP13.6□□□□□ -0.23
RAB5B-203ENST00000546810 STK19P49842 368 aaPredicted RBP13.6□□□□□ -0.23
RAB5B-203ENST00000546810 SERPINH1P50454 418 aaKnown RBP13.6□□□□□ -0.23
RAB5B-203ENST00000546810 PAPOLAP51003 745 aaKnown RBP13.6□□□□□ -0.23
RAB5B-203ENST00000546810 PAFAH1B3Q15102 231 aaKnown RBP13.6□□□□□ -0.23
RAB5B-203ENST00000546810 TFDP3Q5H9I0 405 aa13.6□□□□□ -0.23
RAB5B-203ENST00000546810 AFMIDQ63HM1 303 aa13.6□□□□□ -0.23
RAB5B-203ENST00000546810 LAYNQ6UX15 382 aa13.6□□□□□ -0.23
RAB5B-203ENST00000546810 MFSD7Q6UXD7 560 aa13.6□□□□□ -0.23
RAB5B-203ENST00000546810 SPOCD1Q6ZMY3 1216 aa13.6□□□□□ -0.23
RAB5B-203ENST00000546810 BZW1Q7L1Q6 419 aaKnown RBP13.6□□□□□ -0.23
RAB5B-203ENST00000546810 FAM124AQ86V42 546 aa13.6□□□□□ -0.23
RAB5B-203ENST00000546810 CACUL1Q86Y37 369 aa13.6□□□□□ -0.23
RAB5B-203ENST00000546810 SH2D3CQ8N5H7 860 aa13.6□□□□□ -0.23
RAB5B-203ENST00000546810 NPWQ8N729 165 aa13.6□□□□□ -0.23
RAB5B-203ENST00000546810 NSMCE1Q8WV22 266 aa13.6□□□□□ -0.23
RAB5B-203ENST00000546810 KRT35Q92764 455 aa13.6□□□□□ -0.23
RAB5B-203ENST00000546810 CEP44Q9C0F1 390 aa13.6□□□□□ -0.23
RAB5B-203ENST00000546810 C6orf106Q9H6K1 298 aaPredicted RBP13.6□□□□□ -0.23
RAB5B-203ENST00000546810 NOL6Q9H6R4 1146 aaKnown RBP13.6□□□□□ -0.23
RAB5B-203ENST00000546810 ETNK2Q9NVF9 386 aa13.6□□□□□ -0.23
RAB5B-203ENST00000546810 SLCO3A1Q9UIG8 710 aa13.6□□□□□ -0.23
RAB5B-203ENST00000546810 CABIN1Q9Y6J0 2220 aa13.6□□□□□ -0.23
RAB5B-203ENST00000546810 COL6A6A6NMZ7 2263 aa13.59□□□□□ -0.23
RAB5B-203ENST00000546810 C3orf70A6NLC5 250 aaPredicted RBP13.59□□□□□ -0.23
RAB5B-203ENST00000546810 TTC34A8MYJ7 566 aa13.59□□□□□ -0.23
RAB5B-203ENST00000546810 DFNA5O60443 496 aa13.59□□□□□ -0.23
RAB5B-203ENST00000546810 LDOC1O95751 146 aaPredicted RBP13.59□□□□□ -0.23
RAB5B-203ENST00000546810 GLDCP23378 1020 aa13.59□□□□□ -0.23
RAB5B-203ENST00000546810 CDKN2BP42772 138 aa13.59□□□□□ -0.23
RAB5B-203ENST00000546810 CTSKP43235 329 aa13.59□□□□□ -0.23
RAB5B-203ENST00000546810 COPAP53621 1224 aa13.59□□□□□ -0.23
RAB5B-203ENST00000546810 ARF5P84085 180 aa13.59□□□□□ -0.23
RAB5B-203ENST00000546810 SRSF1Q07955 248 aaKnown RBP eCLIP13.59□□□□□ -0.23
RAB5B-203ENST00000546810 IL10RBQ08334 325 aa13.59□□□□□ -0.23
RAB5B-203ENST00000546810 DNAJC3Q13217 504 aa13.59□□□□□ -0.23
RAB5B-203ENST00000546810 CAMK2GQ13555 558 aaPredicted RBP13.59□□□□□ -0.23
RAB5B-203ENST00000546810 DLG2Q15700 870 aa13.59□□□□□ -0.23
RAB5B-203ENST00000546810 PPP2R5EQ16537 467 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms